EY736127

Overview
NameEY736127
Unique NameEY736127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12554 contig Csv1_Contig12554:14..855. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 1.066e-110
Identity = 186/224 (83.04%), Postives = 195/224 (87.05%), Query Frame = 3
Query:  171 KNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKGGFICDDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXEMMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            K KPVQCL+SAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDE YKRRAEEL+GKVK AIKDV EPLDQLELIDNLQRLGLA+ FE E            KDYNWRKENLYATSLEFRLLRQHGYPVSQEVF+GFKDD+GGFICDDFKGILSLHEASYYSLEGESIMEEA QFTSKHL E+MI  N  E+DVFV EQAKRALELPLH KVPMLE +  IH+Y
Sbjct:   34 KYKPVQCLISAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDEAYKRRAEELRGKVKIAIKDVIEPLDQLELIDNLQRLGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDDQGGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMISKN-MEEDVFVAEQAKRALELPLHWKVPMLEARWFIHIY 256          

HSP 2 Score: 51.2174 bits (121), Expect = 1.066e-110
Identity = 23/25 (92.00%), Postives = 23/25 (92.00%), Query Frame = 2
Query:   71 MSSCINPSTLATSVNGFKCLPLATN 145
            MSSCINPSTL TSVN FKCLPLATN
Sbjct:    1 MSSCINPSTLVTSVNAFKCLPLATN 25          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.204e-52
Identity = 109/227 (48.02%), Postives = 153/227 (67.40%), Query Frame = 3
Query:  177 KPVQCLVSAKYDNLT-VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN-WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKGGF---ICDDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXEMMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            +PVQC+V+ K      + RRSANYQPSIW+HD+++SL   Y  ET  R+   LK +V+  +  V  PL+QLELI+ LQRLGL+YHFE E               + W+ ENLYAT+L+FRLLRQHGY VSQEVF+ FKD++G F   +C+D KG+LSL+EAS++ +EGE+I+EEA  F++KHL E   +  ++EK+  +      +LE PLH ++P LE +  I++Y
Sbjct:   39 RPVQCMVANKVSTSPDILRRSANYQPSIWNHDYIESLRIEYVGETCTRQINVLKEQVRMMLHKVVNPLEQLELIEILQRLGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKDERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEE--YVKQNKEKN--LATLVNHSLEFPLHWRMPRLEARWFINIY 261          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.249e-41
Identity = 100/236 (42.37%), Postives = 136/236 (57.63%), Query Frame = 3
Query:  156 SESWQKNKPVQCLV--SAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKGGFIC----DDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXE-MMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            S S     P+QC +  S   D  T+ RRSANY P IW  DF+QSL   Y  E Y  R+ +LK +VK  +  +   L QLELID LQRLG++YHFE E                  K +LYAT+LEFRLLR++GY + QE+F+ FKD+ G F      DD KG+L+L+EAS+Y   GE+I+EEA  FT+++L   +M+I  +   +  +    + ALE+PLH +    E K  I  Y
Sbjct:   45 SRSRPNCNPIQCSLAKSPSSDTSTIVRRSANYDPPIWSFDFIQSLPCKYKGEPYTSRSNKLKEEVKKMLVGMENSLVQLELIDTLQRLGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDETGKFKASIKNDDIKGVLALYEASFYVKNGENILEEARVFTTEYLKRYVMMIDQNIILNDNMAILVRHALEMPLHWRTIRAEAKWFIEEY 280          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.979e-35
Identity = 86/205 (41.95%), Postives = 119/205 (58.05%), Query Frame = 3
Query:  225 DRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKGG----FICDDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXEMMIIXNSREKDV-FVPEQAKRALELPLHXKVPMLEGK 824
            DRRSANY P IW  DF+QSL   Y  E+Y  R  +L+  VK  +  V   L QLELID +QRLG++Y FE E             D      +LYAT+L+FRLLRQ+G+ V QE+F+ FK+ K G     I +D  G L L+EAS++  +GESI+EEA  FT+K L +  ++ +S   ++  +      ALE+PL  ++   E K
Sbjct:   76 DRRSANYGPPIWSFDFVQSLPIQYKGESYTSRLNKLEKDVKRMLIGVENSLAQLELIDTIQRLGISYRFENEIISILKEKFTNNNDNPNPNYDLYATALQFRLLRQYGFEVPQEIFNNFKNHKTGEFKANISNDIMGALGLYEASFHGKKGESILEEARIFTTKCLKKYKLMSSSNNNNMTLISLLVNHALEMPLQWRITRSEAK 280          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.667e-35
Identity = 90/218 (41.28%), Postives = 122/218 (55.96%), Query Frame = 3
Query:  222 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXK-------DYNWRKENLYATSLEFRLLRQHGYPVSQEVFSG----FKDDKGGFICDDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXEMMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            V RRSANYQPS+W H++L SL + Y  E    R   LK +V   + +    L+QLELID LQRLG++YHFE E                    D N R  +LYAT+LEFRLLRQHG+ ++Q+VF G      DDK      D KGILSL+EASY S   ++ ++E+  +T+K L + + +  +  K   +      ALE+P H +V  LE +  I VY
Sbjct:   24 VSRRSANYQPSLWQHEYLLSLGNTYVKEDNVERVTLLKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRAHKNRIDRN-RWGDLYATALEFRLLRQHGFSIAQDVFDGNIGVDLDDK------DIKGILSLYEASYLSTRIDTKLKESIYYTTKRLRKFVEVNKNETKSYTLRRMVIHALEMPYHRRVGRLEARWYIEVY 234          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.360e-32
Identity = 83/222 (37.39%), Postives = 129/222 (58.11%), Query Frame = 3
Query:  198 SAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYN---WRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKG----GFICDDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXEMMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            S+K       RRS NYQP++WD +++QSLN+ YT+E +  R  EL  +V+  +K+  EP+ QLELI +L+ LGL+  F+ E            K ++     K +LY T+L FRLLRQHG+ +SQ+VF+ FK++KG      +  D KG+L L+EAS+   +GE  +E A +F +K L +  +     E D  +    + +L+LPLH ++  +E +  I  Y
Sbjct:   45 SSKLQEAHQIRRSGNYQPALWDSNYIQSLNTPYTEERHLDRKAELIVQVRILLKEKMEPVQQLELIHDLKYLGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCL-QKKLDEGGNEIDENLLLWIRHSLDLPLHWRIQSVEARWFIDAY 265          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.530e-31
Identity = 74/215 (34.42%), Postives = 124/215 (57.67%), Query Frame = 3
Query:  210 DNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDKG----GFICDDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXEMMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            + +   RR+  YQP++WD   +Q  +S Y +E +  RA  +  +V   +++  + + +LELID+L+RLG++ HF+ E             + +  + +LY+T+L F+LLRQ+ + VSQEVF  FK+DKG      + DD +G+L L+EAS+ S +GE  +  A  F +K L + +++    +KD+ +    +RALELP H +V M   +  I  Y
Sbjct:   51 NEIQTGRRTGGYQPTLWDFSTIQLFDSEYKEEKHLMRAAGMIAQVNMLLQEEVDSIQRLELIDDLRRLGISCHFDREIVEILNSKYYTNNEID--ESDLYSTALRFKLLRQYDFSVSQEVFDCFKNDKGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLHLARDFATKFLHKRVLV----DKDINLLSSIERALELPTHWRVQMPNARSFIDAY 259          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.451e-31
Identity = 85/233 (36.48%), Postives = 128/233 (54.94%), Query Frame = 3
Query:  156 SESWQKNKPVQCLVSAKYDNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDDK----GGFICDDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXEMMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            S S Q+ KP Q             RRS +YQPS+WD +++QSLN+ Y ++ +  R  EL  +V+  +K   E + QLELID+LQ LGL+Y F+ E            + ++    +LY T+L FR+LRQHG+ VS++VF  FK +K       +  D KG+L L+EAS+   EGE  +E A +F+++ L E        E D  +    + +L+LPLH +V  LE +  +  Y
Sbjct:   40 SSSLQQEKPHQI------------RRSGDYQPSLWDFNYIQSLNTPYKEQRHFNRQAELIMQVRMLLKVKMEAIQQLELIDDLQYLGLSYFFQDEIKQILSSIHNEPRYFH--NNDLYFTALGFRILRQHGFNVSEDVFDCFKIEKCSDFNANLAQDTKGMLQLYEASFLLREGEDTLELARRFSTRSLRE-KFDEGGDEIDEDLSSWIRHSLDLPLHWRVQGLEARWFLDAY 257          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.691e-30
Identity = 80/214 (37.38%), Postives = 126/214 (58.88%), Query Frame = 3
Query:  222 VDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEP-LDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DKGGFICDDFKGILSLHEASYYSLEGESIMEEAXQ-FTSKHLXEMMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            + RRS NYQPS W+H +L S+ + Y  ET     + LK KVK+ + D  +  L+QLELID+LQ+LG++YHFE E                W   ++E+L+ATSLEFRLLRQHG+ VS+ +F    D  +   F  ++  GI+SL+EASY S + ++ + +  + F ++ + +   + +   K++ V E+A  ALE+P H ++  L+ +  I  Y
Sbjct:   45 LSRRSGNYQPSPWNHCYLLSIENKYASETEVITRDVLKKKVKSMLDDEKKSRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFDVSENIFDVIIDQIESNTFKTNNINGIISLYEASYLSTKSDTKLHKVIRPFATEQIRK--FVDDEDTKNIEVREKAYHALEMPYHWRMRRLDTRWYIDAY 256          
BLAST of EY736127 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.395e-30
Identity = 77/216 (35.65%), Postives = 120/216 (55.56%), Query Frame = 3
Query:  216 LTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDV--TEPLDQLELIDNLQRLGLAYHFEPEXXXXXXXXXXXXKDYNW---RKENLYATSLEFRLLRQHGYPVSQEVFSGFKD--DKGGFICDDFKGILSLHEASYYSLEGESIMEEAXQFTSKHLXEMMIIXNSREKDVFVPEQAKRALELPLHXKVPMLEGKVVIHVY 842
            L + RRS NYQPS WDH +L S+ + Y +E        LK KVK  +++V     L++LELID+LQ+LG++YHFE E                W   ++E+L+AT+LEFRLLRQHG+ VS+++F    D  +   F  D+   I++L+EASY S + ++ + +  +  +       +   S   ++ + E A  ALE+P H ++  LE +  I  Y
Sbjct:   43 LDLRRRSGNYQPSSWDHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEEVETKSRLEKLELIDDLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVSEDIFDVIIDKIESNTFKSDNITSIITLYEASYLSTKSDTKLHKVIRPFATEQIRNFVDDESETYNIMLREMAIHALEIPYHWRMRRLETRWYIDAY 258          
The following BLAST results are available for this feature:
BLAST of EY736127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
RLC1_CITLI1.066e-11083.04(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
MYRS_QUEIL1.204e-5248.02Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
TPS2_CANSA1.249e-4142.37(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
TPS1_CANSA2.979e-3541.95(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
OCIS_ARATH8.667e-3541.28(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
BPPS_SALOF2.360e-3237.39(+)-bornyl diphosphate synthase, chloroplastic OS=... [more]
SCS_SALOF1.530e-3134.421,8-cineole synthase, chloroplastic OS=Salvia offi... [more]
SSS_SALOF4.451e-3136.48(+)-sabinene synthase, chloroplastic OS=Salvia off... [more]
CINS_ARATH1.691e-3037.381,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
MYRS2_ARATH8.395e-3035.65Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-C07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736127 ID=EY736127; Name=EY736127; organism=Citrus sinensis; type=EST; length=843bp
CACGCGTCCGAATTTGAGAATCCTTGCCAAGTATAACTGTAAGCTAGCTT
ACACTACATCTATATATCCAATGTCTTCTTGCATTAATCCCTCAACCTTG
GCTACCTCTGTAAATGGTTTCAAATGTCTTCCTCTTGCAACAAATAGAGC
AGCCATCAGAATCATGGCAAAAAAATAAGCCAGTCCAATGCCTTGTCAGC
GCCAAATATGATAATTTGACAGTTGATAGGAGATCAGCAAACTACCAACC
TTCAATTTGGGACCATGATTTTTTGCAGTCACTGAATAGCAACTATACGG
ATGAAACATACAAAAGACGAGCAGAAGAGCTGAAGGGAAAAGTGAAGACA
GCGATTAAGGATGTAACCGAGCCTCTGGATCAGTTGGAGCTGATTGATAA
TTTGCAAAGACTTGGATTGGCTTATCATTTTGAGCCTGAGATTCGGAACA
TATTGCGTAATATCCACAACCATAATAAAGATTATAATTGGAGAAAAGAA
AATCTGTATGCAACCTCCCTTGAATTCAGACTACTTAGACAACATGGCTA
TCCTGTTTCTCAAGAGGTTTTCAGTGGTTTTAAAGACGACAAGGGAGGCT
TCATTTGTGATGATTTCAAGGGAATACTGAGCTTGCATGAAGCCTCGTAT
TACAGCTTAGAAGGAGAAAGCATCATGGAGGAGGCCTGNCAATTCACCAG
TAAGCATCTTANAGAAATGATGATCATCANAAACAGCAGGGAAAAGGATG
TATTTGTACCAGAACAAGCGAAACGTGCGCTGGAACTCCCTCTGCATNGG
AAAGTGCCTATGTTAGAGGGCAAGGTGGTCATACACGTTTATG
back to top