EY736010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736010 vs. ExPASy Swiss-Prot
Match: UBP26_ARATH (Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana GN=UBP26 PE=1 SV=2) HSP 1 Score: 290.426 bits (742), Expect = 8.897e-80 Identity = 135/226 (59.73%), Postives = 176/226 (77.88%), Query Frame = 3 Query: 69 SDRDRRKSLKGLADDVLSGKLVEGTYYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPQCSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYMSASGKNASSI-EPEILDGVIDSLECEKHLPLLERAPDLVCERGSNYQTRSATDWLDI 743 S RDRR +K +A+DVLSGK +G YY+S++WLQQW +RKNLDAP+EAD GPT +I C HG+LMPE+A GAKR++VPE W F++EDA+KV +D L C+ FP+DS +C C++ LSEVAC EDS+R K+K+RQNHEKLA GK IPL+ +Y+LLPS WL +WR Y++ +GKN+SS EPE LDGVI++L+C+KH LLER P+LVC RGS +Q +TD L I Sbjct: 611 SYRDRRTFMKSIANDVLSGKCEDGMYYISRAWLQQWIKRKNLDAPTEADAGPTNAITCNHGELMPEQAPGAKRVVVPENFWSFLFEDALKVMSEDTLDCTCFPVDSSQCCHCTEVLSEVACFEDSLRTLKVKQRQNHEKLATGKGIPLTPQSRYFLLPSPWLVQWRIYINMTGKNSSSAPEPERLDGVINTLKCKKHTRLLERLPELVCRRGSYFQKNPSTDKLTI 836 HSP 2 Score: 28.8758 bits (63), Expect = 8.897e-80 Identity = 12/21 (57.14%), Postives = 14/21 (66.67%), Query Frame = 2 Query: 11 NTSIQCLHGKVPESKIGSMKR 73 NT + C HGKV SK+ MKR Sbjct: 550 NTPLLCSHGKVHASKVNCMKR 570
BLAST of EY736010 vs. ExPASy Swiss-Prot
Match: UBP26_ORYSJ (Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. japonica GN=UBP26 PE=2 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 9.644e-61 Identity = 121/223 (54.26%), Postives = 161/223 (72.20%), Query Frame = 3 Query: 75 RDRRKSLKGLADDVLSGKLVEGT-YYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPQCSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYMSASGKNASSI-EPEILDGVIDSLECEKHLPLLERAPDLVCERGSNYQTRSATDWL 737 RDR+ SL+ +A+ L+G +G Y+VS+ WL QW RRKN+D PS+AD GPT ++ C HG L+PE A GAKR+ VPE LWLF+YE + +K DD++ TFP DS+ C CS LS VA +ED++RA KLK+RQ+HEKL GKS+ L KYYL+PS+WL++WR Y++A+GKN SS+ EP+ L+ I+SL CEKH LL+R DLVC+RG+ Q S TD L Sbjct: 616 RDRKASLRSIAEAALAGNNPDGPLYFVSRPWLTQWLRRKNVDIPSDADSGPTIALTCTHGNLLPEHASGAKRVTVPEDLWLFLYETS-GMKIDDIV---TFPSDSQPCGICSQQLSVVASVEDNLRAVKLKQRQSHEKLTSGKSLALHPGQKYYLVPSSWLSEWRAYITATGKNISSLPEPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQKASNTDGL 834
BLAST of EY736010 vs. ExPASy Swiss-Prot
Match: UBP26_ORYSI (Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp. indica GN=UBP26 PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.644e-61 Identity = 121/223 (54.26%), Postives = 161/223 (72.20%), Query Frame = 3 Query: 75 RDRRKSLKGLADDVLSGKLVEGT-YYVSKSWLQQWTRRKNLDAPSEADGGPTTSIRCPHGQLMPEKAGGAKRLLVPEILWLFIYEDAMKVKPDDLLGCSTFPLDSEECPQCSDALSEVACLEDSIRARKLKERQNHEKLALGKSIPLSLDCKYYLLPSTWLTKWRNYMSASGKNASSI-EPEILDGVIDSLECEKHLPLLERAPDLVCERGSNYQTRSATDWL 737 RDR+ SL+ +A+ L+G +G Y+VS+ WL QW RRKN+D PS+AD GPT ++ C HG L+PE A GAKR+ VPE LWLF+YE + +K DD++ TFP DS+ C CS LS VA +ED++RA KLK+RQ+HEKL GKS+ L KYYL+PS+WL++WR Y++A+GKN SS+ EP+ L+ I+SL CEKH LL+R DLVC+RG+ Q S TD L Sbjct: 616 RDRKASLRSIAEAALAGNNPDGPLYFVSRPWLTQWLRRKNVDIPSDADSGPTIALTCTHGNLLPEHASGAKRVTVPEDLWLFLYETS-GMKIDDIV---TFPSDSQPCGICSQQLSVVASVEDNLRAVKLKQRQSHEKLTSGKSLALHPGQKYYLVPSSWLSEWRAYITATGKNISSLPEPQSLEVTINSLICEKHSRLLQRPLDLVCKRGTITQKASNTDGL 834 The following BLAST results are available for this feature:
BLAST of EY736010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736010 ID=EY736010; Name=EY736010; organism=Citrus sinensis; type=EST; length=866bpback to top |