EY736000

Overview
NameEY736000
Unique NameEY736000
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY736000_ssr176 microsatellite EY736000_ssr176:176..190. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9795 contig Csv1_Contig9795:8..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.930e-83
Identity = 149/205 (72.68%), Postives = 172/205 (83.90%), Query Frame = 2
Query:  230 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRLVGLXEXKD 844
            DD +IRQVV ++    EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF VFK+NL +AK  Q  DPTA HG+TKFSDLT SEFRRQFLGL +RLRLPA AQKAPILPT +LP DFDWR+ GAVT V+D G+CGSCW+ S TGALEGAH+L+TG+LVSLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFE      G+ + KD
Sbjct:   26 DDFIIRQVVDNE----EDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKD 226          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 1.002e-78
Identity = 143/206 (69.42%), Postives = 166/206 (80.58%), Query Frame = 2
Query:  227 GDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRLVGLXEXKD 844
            GDD +IRQVV      +E  +L +E HFSLFK KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+    +LP DA KAPILPT +LP DFDWRDHGAVT V++ G+CGSCWS SATGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFE   +  GL + +D
Sbjct:   28 GDDLVIRQVVGG----AEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEED 229          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 1.955e-74
Identity = 136/205 (66.34%), Postives = 161/205 (78.54%), Query Frame = 2
Query:  230 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRLVGLXEXKD 844
            +D +IRQVV    +++E  +L++E HF+LFK KF K Y + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR+ LG+    +LP DA +APILPT +LP +FDWRD GAVT V++ G+CGSCWS S TGALEGAHFL+TG+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFE   +  GL   KD
Sbjct:   26 EDVLIRQVV----DETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKD 226          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 2.315e-67
Identity = 128/210 (60.95%), Postives = 150/210 (71.43%), Query Frame = 2
Query:  230 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRLVGLXEXKD 844
            +D +IRQVVP  G    D  LNAE HF  F  +F K+Y   +EH YR  VFK NLRRA+R QLLDP+A HGVTKFSDLTP+EFRR +LGL +  R     L   A +AP+LPT+ LP DFDWRDHGAV  V++ G+CGSCWS SA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E  SCDSGCNGGLM +AF    +  GL   KD
Sbjct:   24 EDPLIRQVVP--GGDDNDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKD 231          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.583e-34
Identity = 81/179 (45.25%), Postives = 106/179 (59.22%), Query Frame = 2
Query:  290 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT---NDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAF 802
            L  +  F  F+ KF+K Y+  EE+  RF +FK+NL + +   L+          GV KF+DL+  EF+  +L  N+      D   A  L     N +PT FDWR  GAVT V++ G CGSCWS S TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+
Sbjct:   23 LEEQSQFLEFQDKFNKKYS-HEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLN-NKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAY 199          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.263e-30
Identity = 77/181 (42.54%), Postives = 107/181 (59.12%), Query Frame = 2
Query:  308 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRLVGLXEXKD 844
            F  F + +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +G+TKFSDLT  EF   +L  N  L+  +  + +P    NDL P ++DWR  GAVT V++ G CGSCW+ S TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+     L GL    D
Sbjct:  165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHTIYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETEDD 334          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.956e-30
Identity = 75/183 (40.98%), Postives = 109/183 (59.56%), Query Frame = 2
Query:  293 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQL-LDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRLVGL 829
            N +  +  FK K+ K Y   E+ + RF +FK+N+ +A+  Q+ +  +A++GVT +SDLT  EF R  L  +    +P+     P       N++P +FDWR+ GAVT V++ G CGSCW+ S TG +E   F  TG+L+SLSEQQLVDCD           D GCNGGL ++A+E   ++ GL
Sbjct:   15 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTAS--WVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGL 185          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.599e-30
Identity = 81/192 (42.19%), Postives = 107/192 (55.73%), Query Frame = 2
Query:  275 SEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-PTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRLVGLXEXKD 844
            S+D  +     F  F   +++TY ++EE  +R  VF  N+ RA++ Q LD  TA +GVTKFSDLT  EFR  +L  N  LR     +        DL P ++DWR  GAVT V+D G CGSCW+ S TG +EG  FL+ G L+SLSEQ+L+DCD           D  C GGL ++A+     L GL    D
Sbjct:  176 SQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYL--NTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSAIKNLGGLETEDD 356          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.916e-29
Identity = 74/175 (42.29%), Postives = 96/175 (54.86%), Query Frame = 2
Query:  299 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAF 802
            E  F+ FK K+ K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F    +RLR      K   + T   P   DWR+ GAVT V+  G CGSCW+ S  G +EG   ++   LVSLSEQ LV CD         + DSGCNGGLM++AF
Sbjct:   38 EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAF 197          
BLAST of EY736000 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.502e-29
Identity = 75/218 (34.40%), Postives = 117/218 (53.67%), Query Frame = 2
Query:  239 MIRQVVPSDGEQSEDHLL----NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK------------APILPTNDLPTDFDWRDHGAVTGVQDXGACGSCWSXSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFE*YSRLVGLXEXKD 844
            MI  ++     Q E HL     +A+H+F  F   ++K Y   +  +YRF++FK NL     +  L+ +A++ + KFSDL+ +E   ++ GL  +   P++  +            AP    ++LP +FDWR +  +T V+D GACGSCW+ +A G LE  + +    L++LSEQQL+DCD         S +  C+GGLM++AFE      GL E  D
Sbjct:    5 MIFTILLVASSQIEGHLKFDIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKK--PSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEID 211          
The following BLAST results are available for this feature:
BLAST of EY736000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
CYSP_PEA3.930e-8372.68Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
RD19A_ARATH1.002e-7869.42Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH1.955e-7466.34Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_MAIZE2.315e-6760.95Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI2.583e-3445.25Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATF_MOUSE2.263e-3042.54Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATL_SCHMA2.956e-3040.98Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATF_HUMAN8.599e-3042.19Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CYSP_TRYBB1.916e-2942.29Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATV_NPVAH2.502e-2934.40Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-G06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736000 ID=EY736000; Name=EY736000; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGAGAAATTAGGTGTC
GAAATCTCATAAGCGGACCCAACCACAAGTTTCTTCTGTCTTTTTGGAAA
CATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTGAAACAAATCAAA
AATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCCTCCTATCTGCTG
TGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCTATGATCAGACAG
GTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCTCCTGAACGCGGA
GCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACTTACGCCACTC
AGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAACCTCCGCCGA
GCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACGGTGTCACCAA
GTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTCCTTGGCTTGA
ATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCTCCTATCCTCCCT
ACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACGGCGCCGTTAC
TGGCGTTCAAGACCNAGGCGCATGTGGATCGTGCTGGTCGTNTAGTGCAA
CCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGAGCTTGTCAGC
CTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTGATCCAGAGGA
ATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATGAACTCTGCCT
TTGAGTAATACTCAAGGCTGGTGGGGTTGANCGAAANAAAGGATACCCTT
ACC
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