EY735982

Overview
NameEY735982
Unique NameEY735982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBC22_ARATH (Ubiquitin carrier protein E2 22 OS=Arabidopsis thaliana GN=UBC22 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.485e-56
Identity = 117/185 (63.24%), Postives = 128/185 (69.19%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFKSGAISESTTALNVDQTITNMDQKNNTPSGGXXXXXXXXXXXXXXXXTRGGNNQDQPSAAVPTVEIGIGGXXXXXXXXXXQKKEVGLAKVQADRKKIDARKKSLKRL 605
            HPN+A+NGEICVNTLKKDWNPSLGLRHVL VVRCLLIEPFPESALNEQAGKMLLENY+EYARHAR+YTGIHAKPKPKFK+GAISESTTALNV QT       N TP                   T    +Q   +  V      +            QK+E GLAKVQAD+KK+DARKKSLKRL
Sbjct:   84 HPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARHARLYTGIHAKPKPKFKTGAISESTTALNVGQT------NNETPGAATAIPSSMTDIKRV---TTSAQDQQHVANVVVAASASV--------VTTTQKREAGLAKVQADKKKVDARKKSLKRL 251          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROAN (Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae GN=GF21161 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.245e-26
Identity = 54/86 (62.79%), Postives = 70/86 (81.40%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFKSGAISES 308
            HPN+A NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P  K  +GA  +S
Sbjct:   88 HPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP-AKCAAGAAGDS 172          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.774e-26
Identity = 53/86 (61.63%), Postives = 70/86 (81.40%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFKSGAISES 308
            HPN+A NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P  K   GA+ ++
Sbjct:   88 HPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP-AKCGVGAVGDA 172          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.623e-26
Identity = 50/74 (67.57%), Postives = 65/74 (87.84%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKP 272
            HPN+A+NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P
Sbjct:   88 HPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP 161          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROGR (Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi GN=GH12079 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.623e-26
Identity = 50/74 (67.57%), Postives = 65/74 (87.84%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKP 272
            HPN+A+NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P
Sbjct:   88 HPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP 161          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKP 272
            HPN+A NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P
Sbjct:   88 HPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP 161          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROWI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila willistoni GN=GK16201 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKP 272
            HPN+A NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P
Sbjct:   88 HPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP 161          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKP 272
            HPN+A NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P
Sbjct:   88 HPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP 161          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26
Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKP 272
            HPN+A NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P
Sbjct:   88 HPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP 161          
BLAST of EY735982 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.732e-26
Identity = 54/86 (62.79%), Postives = 70/86 (81.40%), Query Frame = 3
Query:   51 HPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHAKPKPKFKSGAISES 308
            HPN+A NGEICVNTLKKDW P LG++H+L+ ++CLLI P PESALNE+AGKMLLE Y++Y++ AR+ T IHA+P  K   GA S++
Sbjct:   88 HPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP-AKCGVGAASDA 172          
The following BLAST results are available for this feature:
BLAST of EY735982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
UBC22_ARATH7.485e-5663.24Ubiquitin carrier protein E2 22 OS=Arabidopsis tha... [more]
UBE2S_DROAN1.245e-2662.79Ubiquitin-conjugating enzyme E2 S OS=Drosophila an... [more]
UBE2S_DROME2.774e-2661.63Ubiquitin-conjugating enzyme E2 S OS=Drosophila me... [more]
UBE2S_DROVI3.623e-2667.57Ubiquitin-conjugating enzyme E2 S OS=Drosophila vi... [more]
UBE2S_DROGR3.623e-2667.57Ubiquitin-conjugating enzyme E2 S OS=Drosophila gr... [more]
UBE2S_DROYA4.732e-2667.57Ubiquitin-conjugating enzyme E2 S OS=Drosophila ya... [more]
UBE2S_DROWI4.732e-2667.57Ubiquitin-conjugating enzyme E2 S OS=Drosophila wi... [more]
UBE2S_DROSI4.732e-2667.57Ubiquitin-conjugating enzyme E2 S OS=Drosophila si... [more]
UBE2S_DROSE4.732e-2667.57Ubiquitin-conjugating enzyme E2 S OS=Drosophila se... [more]
UBE2S_DROPS4.732e-2662.79Ubiquitin-conjugating enzyme E2 S OS=Drosophila ps... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-E08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735982 ID=EY735982; Name=EY735982; organism=Citrus sinensis; type=EST; length=890bp
CACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGTCCTGACGAAGATATC
CATCCAAATATTGCAACAAATGGTGAAATTTGTGTGAATACACTAAAAAA
AGATTGGAATCCAAGTCTTGGATTGAGACATGTTCTCATCGTAGTCCGGT
GTTTATTGATTGAACCATTTCCGGAATCAGCATTGAATGAACAGGCTGGT
AAGATGCTGCTTGAAAATTATGAGGAGTATGCCAGACATGCCAGGATTTA
CACTGGGATTCATGCAAAGCCAAAACCAAAATTCAAGTCAGGAGCTATTT
CTGAATCAACAACGGCACTGAATGTTGACCAGACTATCACCAACATGGAC
CAGAAGAACAACACACCATCTGGTGGCGCAATACCATTGCCATTGGCGCA
ACCACTAGCTCCTTCCGCAACAGCCACTAGAGGAGGAAATAATCAGGATC
AGCCATCCGCTGCTGTTCCAACAGTGGAGATAGGAATCGGCGGGTCTGCT
ACAACACCCGCTTCCGCCACTACACAAAAGAAAGAAGTTGGGCTGGCAAA
AGTCCAGGCTGACAGGAAGAAAATAGATGCTAGGAAGAAGAGTTTGAAGA
GATTATAGTTATGGGGGATTTTTTTTGTTTTTTTTGGTTTAAATTGTTGA
AAGTGACGGTCTGAAAAGGATTGGTCGTGCCTGGTGTAATGCGATTATGT
TGGGAAAAGTTCAGTTGGGCTGTTCTCTTTGATTTCATTAACATCCTTTT
TAGCCTTTGTTTTATGAATACTACAAAAAAGGAAGGGGGCTTGGGGTGGC
GCACCTTGGTACTTANTGATCCAATCTTGGATGTGGGATTTCAATAATTA
AATAGAACAGGATTATCAGAAATGAAATAATGGCAGTCTG
back to top