EY735924

Overview
NameEY735924
Unique NameEY735924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12327 contig Csv1_Contig12327:1..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY735924 vs. ExPASy Swiss-Prot
Match: PAP8_ARATH (Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 9.888e-70
Identity = 137/229 (59.83%), Postives = 169/229 (73.80%), Query Frame = 2 
Query:   29 MAAAAFSLTLSSPVSKPHTFCTSHYSKPINASFSASLPCK----RSPRTALKIVRAVSISSPDLRTGPDDLVASILSKVNQSDGGVSLXXXXXXXXXXXXXXLQKYCVEAPVKCPLIFGEWDVVYCSVPTSPGGGYRSAFGRLFFKTKEMIQAVEAPDTVRNKVSFTALGFLDGEVSLKGKLNALDEKWIQVVFEPPELKVGGLESRYGGQSEVKLQITYINEQIRLGL 703
            MAA A SLT++S  S+P T    H S+ +N     S+P K    RS R  L +V +VS  + +LRTGPDDL++++LSKV  SDGGV+L              LQKYCV+ PVK PLIFG+W+VVYCS PTSPGGGYRS  GRLFFKTKEMIQA++APD VRNKVS  A GFLDG+VSL GKL ALD +W+QV+FEPPE+KVG LE +YG +SEVKL+ITY++E++RLGL
Sbjct:    1 MAATASSLTIASSFSEPRT--QIHSSRRLNLPLQYSIPYKVLRSRSRRLGL-VVSSVSAPNVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPLIFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTGKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGL 226
The following BLAST results are available for this feature:
BLAST of EY735924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAP8_ARATH9.888e-7059.83Probable plastid-lipid-associated protein 8, chlor... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735924 ID=EY735924; Name=EY735924; organism=Citrus sinensis; type=EST; length=793bp
CCACGCGTCCGGCCTTCATCACCTCTCCATGGCCGCTGCTGCTTTTTCTC
TTACACTCTCATCCCCTGTTTCTAAACCCCACACATTCTGCACAAGTCAT
TATTCAAAACCCATAAACGCAAGTTTTTCAGCTTCACTTCCTTGCAAAAG
AAGTCCTCGCACCGCACTGAAAATCGTCAGGGCTGTTTCCATCTCCAGCC
CAGATCTGCGAACCGGTCCCGACGATTTGGTTGCTTCTATCCTCTCCAAG
GTGAACCAATCGGATGGAGGAGTTTCACTAGCCAAAGAAGAACACAAAGA
GGTCGCTGAAGTTGCTCAAGAGTTGCAAAAATATTGTGTTGAAGCACCAG
TAAAATGCCCTCTAATCTTTGGAGAATGGGATGTCGTGTACTGTTCAGTG
CCAACTTCACCTGGGGGTGGCTACAGAAGTGCATTTGGCCGTCTTTTCTT
CAAAACAAAGGAAATGATTCAGGCTGTTGAAGCTCCTGACACTGTTAGAA
ACAAGGTTTCCTTCACCGCTCTGGGTTTTCTTGACGGAGAGGTCTCTTTG
AAAGGAAAGCTTAATGCTCTGGATGAGAAATGGATTCAAGTTGTATTTGA
ACCACCTGAACTGAAAGTTGGAGGATTGGAGTCCCGATATGGCGGTCAGA
GTGAGGTTAAGTTGCAGATTACATACATAAATGAACAGATCAGGCTGGGG
TTACGATCGAGAGGGTCAGTATTTGGTTTCAGGAGACGCCCGCAAGCGGA
TAGGTGGGACGAGGTAGGGGGGGGGCGGGTGGTCTGGACGGGG
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