EY735923

Overview
NameEY735923
Unique NameEY735923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735923_ssr834 microsatellite EY735923_ssr834:834..845. BLAST: Citrus ESTs to SwissProt
Homology
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_THETN (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Thermoanaerobacter tengcongensis GN=fabH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.115e-13
Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = -1
Query:    2 EATMIGIKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYSK 448
            E    GI    SY+P   + N+         +E+I  + G       D +Q TSDL  EA       + +LK E +D +IV T   D    P TA IVQ  LG   + AAFDIS+GCSG++YG+   + F+E    +N L++ A+  SK
Sbjct:    3 EKIAAGILGTGSYLPEKILTNFDLEKMVDTSDEWITTRTGIKERRIADPSQATSDLATEASKRAL-EDANLKPEDLDMIIVATVTPDMN-FPSTACIVQANLGA-LNAAAFDISVGCSGFIYGLAIAQQFVETGMYRNVLVIGAETLSK 148          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_NEIG2 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria gonorrhoeae (strain NCCP11945) GN=fabH PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = -1
Query:    2 IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYSK 430
            I    SY+PA+ + N     K    +E+I  + G  F       ++TSDL  EA     A+   L    ID +IV T   D +  P TA IVQ KLG+     AFD+   C+G++Y +     ++++   KN L++ A+ +S+
Sbjct:    6 ISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRALAD-AKLNINDIDLIIVATATPDMQ-FPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSR 146          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_NEIG1 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=fabH PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 45/143 (31.47%), Postives = 71/143 (49.65%), Query Frame = -1
Query:    2 IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYSK 430
            I    SY+PA+ + N     K    +E+I  + G  F       ++TSDL  EA     A+   L    ID +IV T   D +  P TA IVQ KLG+     AFD+   C+G++Y +     ++++   KN L++ A+ +S+
Sbjct:    6 ISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRALAD-AKLNINDIDLIIVATATPDMQ-FPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSR 146          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_NEIMA (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria meningitidis serogroup A GN=fabH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = -1
Query:    2 IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYSK 430
            I    SY+PA+ + N     K    +E+I  + G  F       ++TSDL  EA      +   L    ID +IV T   D +  P TA IVQ KLG+     AFD+   C+G++Y +     ++++   KN L++ A+ +S+
Sbjct:    6 ISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRAL-DAAGLNGNEIDLIIVATATPDMQ-FPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSR 146          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_NEIMB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria meningitidis serogroup B GN=fabH PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 44/143 (30.77%), Postives = 71/143 (49.65%), Query Frame = -1
Query:    2 IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYSK 430
            I    SY+PA+ + N     K    +E+I  + G  F       ++TSDL  EA +    +   L    ID +IV T   D +  P TA IVQ KLG+     AFD+   C+G++Y +     ++++   KN L++ A+ +S+
Sbjct:    6 ISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAAHRAL-DAAGLDSGEIDLIIVATATPDMQ-FPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSR 146          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_SULNB (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Sulfurovum sp. (strain NBC37-1) GN=fabH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 49/143 (34.27%), Postives = 77/143 (53.85%), Query Frame = -1
Query:    5 KSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQE--TSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYS 427
            +SI +YVP+  + N          +E+I+ + G     R  AA +  TSD+  +A   L      +++E ID ++  T   D   +P TA I+ DKLG+  +V AFDIS  CSG+VY +   K F+E+   KN L++ A+ +S
Sbjct:   12 RSIGAYVPSKILSNADLEKMVDTTDEWIVKRTG--IKERHIAADDEYTSDMGAKAAK-LAIERAGIEKEDIDLVLCATVTPDYFNMPSTACIISDKLGI-RNVQAFDISAACSGFVYLLTVAKAFIESGMKKNVLIIGAEKFS 150          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_NEIMF (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=fabH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = -1
Query:    2 IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYSK 430
            I    SY+PA+ + N     K    +E+I  + G  F       ++TSDL  EA      +   L    ID +IV T   D +  P TA IVQ KLG+     AFD+   C+G++Y +     ++++   KN L++ A+ +S+
Sbjct:    6 ISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRAL-DAAGLDSGEIDLIIVATATPDMQ-FPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSR 146          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_NEIM0 (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Neisseria meningitidis serogroup C (strain 053442) GN=fabH PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = -1
Query:    2 IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYSK 430
            I    SY+PA+ + N     K    +E+I  + G  F       ++TSDL  EA      +   L    ID +IV T   D +  P TA IVQ KLG+     AFD+   C+G++Y +     ++++   KN L++ A+ +S+
Sbjct:    6 ISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRAL-DAAGLDSGEIDLIIVATATPDMQ-FPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSR 146          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_HELHP (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Helicobacter hepaticus GN=fabH PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 51/142 (35.92%), Postives = 73/142 (51.41%), Query Frame = -1
Query:    5 IKSIASYVPADGIDNYAQGAKFAKDEEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYS 430
            +KSIASY+P   I N         ++E+I  + G         +Q+TSDL  EA          ++ + IDA+IV T + D   +P TA I   KLG+    AAFDIS  CSG+VY +   K F+E+   K  L++ A+  S
Sbjct:    8 LKSIASYIPPTCISNVDFEKTLDTNDEWITKRTGIKTRYFALPSQQTSDLAYEAGKKAI-ERAGIEPKDIDAVIVATLSPDYLTMPSTACITSFKLGIENK-AAFDISAACSGFVYLLSLAKSFIESGTYKQILIIGAEKTS 147          
BLAST of EY735923 vs. ExPASy Swiss-Prot
Match: FABH_RALSO (3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ralstonia solanacearum GN=fabH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.990e-12
Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = -1
Query:    2 SYVPADGIDNYAQGAKFAKD-----EEFIIGKIGSAFLPRKDAAQETSDLCVEAVNALFANNPDLKRESIDALIVVTQNGDEEGLPHTAAIVQDKLGLPTHVAAFDISLGCSGYVYGIYAMKGFMEATGLKNGLLVTADPYSK 415
            SY+P   + N+   A+ A+      +E+I+ + G       +     SDL  +A          + R  ID ++V T   D    P  A +VQ KLGL  H AAFD+   CSG+VYG+     F+ A G +N L++ A+ +S+
Sbjct:   12 SYLPPKRVTNHELAAQLAEQGIETSDEWIVTRSGIRARHYAEPDVTCSDLAAKAAERAI-EAAGIDRAEIDLILVATSTPDFV-FPSAACLVQQKLGLSNHCAAFDLQAVCSGFVYGLATADKFIRAGGYRNALVIGAEVFSR 152          
The following BLAST results are available for this feature:
BLAST of EY735923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
FABH_THETN1.115e-1335.573-oxoacyl-[acyl-carrier-protein] synthase 3 OS=The... [more]
FABH_NEIG25.533e-1331.473-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nei... [more]
FABH_NEIG15.533e-1331.473-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nei... [more]
FABH_NEIMA2.103e-1230.773-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nei... [more]
FABH_NEIMB2.746e-1230.773-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nei... [more]
FABH_SULNB3.587e-1234.273-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Sul... [more]
FABH_NEIMF3.587e-1230.773-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nei... [more]
FABH_NEIM03.587e-1230.773-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Nei... [more]
FABH_HELHP4.684e-1235.923-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Hel... [more]
FABH_RALSO7.990e-1231.473-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Ral... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735923 ID=EY735923; Name=EY735923; organism=Citrus sinensis; type=EST; length=847bp
TCTTCGAGTACGGGTCGGCGGTCACCAGCAGGCCGTTTTTCAGGCCCGTG
GCTTCCATGAAGCCCTTCATCGCATAGATGCCGTAGACATAGCCCGAGCA
GCCCAGGGAAATATCAAAGGCCGCCACGTGAGTCGGCAGGCCCAGTTTGT
CCTGGACGATGGCGGCGGTGTGAGGCAAGCCCTCTTCGTCGCCGTTCTGG
GTGACGACGATCAGCGCATCGATGGATTCGCGCTTCAAATCGGGGTTGTT
GGCAAACAAGGCGTTGACCGCCTCGACGCACAGATCGGAGGTTTCCTGTG
CAGCATCCTTGCGCGGCAGGAACGCCGAACCGATCTTGCCAATGATGAAT
TCTTCATCCTTGGCGAATTTGGCACCCTGGGCGTAGTTATCGATCCCGTC
TGCCGGCACGTAACTGGCGATGCTTTTTATGCCAATCATTGTGGCTTCCC
AATACTAAATAGCTGGAGAACACCCCGCGAGACACGTCGCCGGGTGCTGA
CAATAATGGGGATAACCCCGCAAAAAACTCGCCGAAAACCGCCTTTACAC
CTTGGGCGGCAGGCCCTCGCAGAGACCTGGCGACGACCTATCCTTTTCAC
ACGATACAGGGGAGGATGCGCTTTATACATCACAGGTCCCGCAATGTTCG
TGCGCTTGGTGGGAGAAGAGGGGGGACAGCAAGGCTCCAGTGGCGAGACG
GGCCATCGCGGGGTCGGGGGTGAGCCGGAGGTGTGCAGTCGGTGGAGTGC
GGGTTGTCTGGGAGCGGCTCCCCCGGGGGCGCGTGCGCCGGGGCCGCTCC
TGCACCGGGCACCTGTCGGTGCCTCCCGGGTCGGGGCGGGCGGGCGG
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