EY735913

Overview
NameEY735913
Unique NameEY735913
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10021 contig Csv1_Contig10021:538..1128. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY735913 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.143e-26
Identity = 79/188 (42.02%), Postives = 108/188 (57.45%), Query Frame = 1 
Query:    7 VRSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQLEYQTESPIKLVGT-KKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKEDT-EYEASNKPSKILDINX*SI*DSKELPSLETQLKRLRGVXDMXDNIQDDRNVLRRSDSSAFSRYNTASN 564
            V SN E   ++ V   A KE Q+H+++ E+     RDL++  +R+ DL LE + E   K  G  ++ N  +  SSK   ++ +G LDL+SESPSSK  +E     G+  K + S  +D  E EA N   K LD N  S+  S+EL  +E   KR RG  D    ++DDRNVLRRS+ SAFSRYN ASN
Sbjct:  288 VHSNPEFPSNQLVAPPAEKETQEHDDKFEDVTM-GRDLEISIRRNCDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVGKGPLDLSSESPSSKQMHEDG---GSSFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISEELMHVEHSSKRHRGTKDDGTLVRDDRNVLRRSEGSAFSRYNPASN 471
The following BLAST results are available for this feature:
BLAST of EY735913 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
APRR7_ARATH5.143e-2642.02Two-component response regulator-like APRR7 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-F07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735913 ID=EY735913; Name=EY735913; organism=Citrus sinensis; type=EST; length=591bp
CCACGCGTCCGCTCAAATGCTGAGATAACTGGTAGCAGAAGGGTTCCTGT
GACTGCAGCAAAAGAGTGTCAAGACCACGAGGAACGATGTGAAAATTTTG
CAAAACGCAGCAGAGACCTGGATGTAGGTGGCCAAAGAAGTCTAGATTTG
CAACTTGAGTACCAAACTGAGTCTCCCATCAAACTTGTAGGCACAAAAAA
AACTAACCGGCTTGATCTGGGCTCCTCTAAATTGAGTGAGCAAATTGACA
GAGGACAGCTGGACCTCAATAGTGAGAGTCCATCTAGCAAACTGAAGTAT
GAAGCTGCTAAACTTGCAGGGGCCATAACCAAGATTATTGATTCTGATAA
GGAGGATACAGAGTATGAGGCTTCAAACAAGCCTTCCAAGATCTTAGATA
TAAACAGNTAATCCATTTAGGATTCCAAAGAATTACCATCCCTGGAAACT
CAGTTAAAGAGACTTAGAGGAGTTNAAGACATGGNNGACAACATTCAGGA
TGACCGCAATGTGTTGAGACGTTCCGACTCTTCAGCCTTCTCAAGGTATA
ACACAGCCTCCAATGTAAAATAAGGGTCCTGGTGGGAACAT
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