EY735911

Overview
NameEY735911
Unique NameEY735911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length333
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11393 contig Csv1_Contig11393:91..423. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_YERPS (Multidrug resistance protein mdtB OS=Yersinia pseudotuberculosis GN=mdtB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.151e-35
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN +LAAWAN   A++LNIQRQPG NVI   D I+ +LP +  +LP  +DV VLTDRT TIRASV DVQ ELL+AIALVVMV +LFLR  +ATIIPSIAVPLSLVGTF
Sbjct:  275 AENNKLAAWANTQSAIVLNIQRQPGVNVIATADSIREMLPELIKSLPKSVDVKVLTDRTSTIRASVNDVQFELLLAIALVVMVIYLFLRNAAATIIPSIAVPLSLVGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_YERPE (Multidrug resistance protein mdtB OS=Yersinia pestis GN=mdtB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.151e-35
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN +LAAWAN   A++LNIQRQPG NVI   D I+ +LP +  +LP  +DV VLTDRT TIRASV DVQ ELL+AIALVVMV +LFLR  +ATIIPSIAVPLSLVGTF
Sbjct:  275 AENNKLAAWANTQSAIVLNIQRQPGVNVIATADSIREMLPELIKSLPKSVDVKVLTDRTSTIRASVNDVQFELLLAIALVVMVIYLFLRNAAATIIPSIAVPLSLVGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_PHOLL (Multidrug resistance protein mdtB OS=Photorhabdus luminescens subsp. laumondii GN=mdtB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.151e-35
Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN +L AW+N  QA+++N+QRQPGANVIE  D I+ +LP +  +LP  +D+ +LTDRT TIRASVKDVQ ELL+AIALVVMV +LFLR   AT+IPSIAVPLSL+GTF
Sbjct:  275 AENTKLGAWSNNTQAIVINVQRQPGANVIETTDNIRQMLPELISSLPKSVDMKILTDRTTTIRASVKDVQFELLLAIALVVMVIYLFLRNGIATLIPSIAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SERP5 (Multidrug resistance protein mdtB OS=Serratia proteamaculans (strain 568) GN=mdtB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.374e-35
Identity = 73/109 (66.97%), Postives = 87/109 (79.82%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN RLAAWAN+  A++LNIQRQPG NVI   D I+ +LP +  +LP  +DV VLTDRT TIRASV DVQ ELL+A+ALVVMV ++FLR   ATIIPS+AVPLSL+GTF
Sbjct:  275 AENTRLAAWANKQPAIVLNIQRQPGVNVITTADSIREMLPQLIKSLPKSVDVKVLTDRTTTIRASVSDVQFELLLAVALVVMVIYVFLRNVPATIIPSVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_CITK8 (Multidrug resistance protein mdtB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtB PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.249e-34
Identity = 67/109 (61.47%), Postives = 87/109 (79.82%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  ++VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVNVTVLSDRTTNIRASVTDTQFELMLAIALVVMIIYLFLRNVPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SHIB3 (Multidrug resistance protein mdtB OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mdtB PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.077e-33
Identity = 67/109 (61.47%), Postives = 87/109 (79.82%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  ++VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVEVTVLSDRTTNIRASVDDTQCELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ESCF3 (Multidrug resistance protein mdtB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.077e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVNDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_ECOLU (Multidrug resistance protein mdtB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mdtB PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.077e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVNDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SHISS (Multidrug resistance protein mdtB OS=Shigella sonnei (strain Ss046) GN=mdtB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
[Close]
BLAST of EY735911 vs. ExPASy Swiss-Prot
Match: MDTB_SHIFL (Multidrug resistance protein mdtB OS=Shigella flexneri GN=mdtB PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.407e-33
Identity = 67/109 (61.47%), Postives = 86/109 (78.90%), Query Frame = 3 
Query:    3 AENERLAAWANENQAVLLNIQRQPGANVIEVVDRIKALLPSITDNLPAGLDVTVLTDRTQTIRASVKDVQHELLIAIALVVMVTFLFLRRFSATIIPSIAVPLSLVGTF 329
            AEN  L AWAN+ QA+++N+QRQPGAN+I   D I+ +LP +T++LP  + VTVL+DRT  IRASV D Q EL++AIALVVM+ +LFLR   ATIIP +AVPLSL+GTF
Sbjct:  275 AENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTF 383
The following BLAST results are available for this feature:
BLAST of EY735911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MDTB_YERPS1.151e-3569.72Multidrug resistance protein mdtB OS=Yersinia pseu... [more]
MDTB_YERPE1.151e-3569.72Multidrug resistance protein mdtB OS=Yersinia pest... [more]
MDTB_PHOLL1.151e-3566.06Multidrug resistance protein mdtB OS=Photorhabdus ... [more]
MDTB_SERP54.374e-3566.97Multidrug resistance protein mdtB OS=Serratia prot... [more]
MDTB_CITK88.249e-3461.47Multidrug resistance protein mdtB OS=Citrobacter k... [more]
MDTB_SHIB31.077e-3361.47Multidrug resistance protein mdtB OS=Shigella boyd... [more]
MDTB_ESCF31.077e-3361.47Multidrug resistance protein mdtB OS=Escherichia f... [more]
MDTB_ECOLU1.077e-3361.47Multidrug resistance protein mdtB OS=Escherichia c... [more]
MDTB_SHISS1.407e-3361.47Multidrug resistance protein mdtB OS=Shigella sonn... [more]
MDTB_SHIFL1.407e-3361.47Multidrug resistance protein mdtB OS=Shigella flex... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-F05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735911 ID=EY735911; Name=EY735911; organism=Citrus sinensis; type=EST; length=333bp
GAGCCGAGAACGAACGCCTCGCGGCCTGGGCCAATGAAAACCAGGCGGTC
TTGCTGAACATTCAGCGCCAGCCCGGGGCCAACGTCATCGAAGTGGTGGA
CCGGATCAAGGCATTGTTGCCGAGCATCACCGACAACCTGCCGGCCGGCC
TGGACGTGACGGTGCTCACTGACCGGACCCAGACCATCCGGGCCTCGGTC
AAGGACGTACAACACGAATTGCTGATCGCCATTGCCCTGGTGGTGATGGT
GACGTTCCTGTTCCTGCGCCGCTTCAGCGCGACCATCATCCCGTCCATTG
CCGTGCCACTGTCCCTGGTGGGCACCTTTGGCG
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