EY735905

Overview
NameEY735905
Unique NameEY735905
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length529
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3254 contig Csv1_Contig3254:258..786. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY735905 vs. ExPASy Swiss-Prot
Match: NAC8_ARATH (NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.791e-18
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 3 
Query:    6 RPGNANDGTSKGK-PGLSDYARLGSEHLKKDLEECQMLVHDPANIELDTPPEFGLSQLEFNSQDSFIPFGGSK 221
            R  N N G+ K K P ++DYA LG E  K+DLEECQ +V DP+NIELDTPPEF LSQLEF SQDSF+ +G  K
Sbjct:  375 REENTNSGSLKDKQPCIADYAHLGPEDFKRDLEECQKIVLDPSNIELDTPPEFRLSQLEFGSQDSFLAWGTGK 447
The following BLAST results are available for this feature:
BLAST of EY735905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NAC8_ARATH1.791e-1863.01NAC domain-containing protein 8 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-E09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735905 ID=EY735905; Name=EY735905; organism=Citrus sinensis; type=EST; length=529bp
CCACGCGTCCGGGAAATGCGAATGATGGAACATCAAAGGGAAAACCTGGT
CTTTCTGATTATGCTCGGTTAGGATCTGAACATTTGAAGAAGGATTTGGA
GGAGTGTCAGATGCTAGTCCATGATCCTGCAAACATCGAACTCGATACAC
CTCCAGAATTTGGACTGAGCCAGCTTGAATTTAACTCACAGGATAGTTTC
ATTCCATTCGGTGGAAGCAAGGCAATAAACTAATTTGTGGATTTCCAGTG
GTTGCTTTTATGACAAACTTGCCTTCTAAACCTTCCTCGGGACTTTTGAG
CCACAATTTCTTGCCCGATATCCAAACTAAGCTACTGATTTGTAATTGTA
AACTGATGCTGAAATTTATCTTCTTTGGGACAAGCTCATAGCCATGTCTC
TTAAGAAAGATTTCTGAAGCTTTTTATTAGGCCAAACAATGTAGAGCTGT
TAACGATTTGCATGTAATCTTTNCATGTTGGAGGGAACTTCTAAGTTCTA
AAAAAAAANNAAAAAAAAAAAAAAAAAAG
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