EY735898

Overview
NameEY735898
Unique NameEY735898
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735898_ssr216 microsatellite EY735898_ssr216:216..230. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR7_ARATH (Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic OS=Arabidopsis thaliana GN=PUR7 PE=2 SV=2)

HSP 1 Score: 278.485 bits (711), Expect = 5.596e-75
Identity = 152/271 (56.09%), Postives = 178/271 (65.68%), Query Frame = 2
Query:   17 MAECMRTTLNPPKTPLHSNKISAPKLXXXXXXXXXGTKPNSSNSNNYPRISLSVMSXXXXXXXXXXXXXXXXXYLSLDAVISSNRKAELLGDIKGSLSNRLSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTR 829
            MA+C+R+TLNP +TP    + +  K             P     N YP+    VMS                  LSLD +++SNRK E+LG IK SLSN LSETNL  TVPGLKS+ +GKVRDIYD GDYLVL+TTDR SAFDR LASIPFKGQVLNETSLWWF+ T+HITPNA++SSPD+NV IAKKCSV P+EFVVRG+VTGSTDTSLWTVYNKG+R YCG+ L DG                         L + QKLPANI+TPTT+
Sbjct:    1 MAQCVRSTLNPVRTPQSFTRKAYVKSPAFASVSFLRAVPEF---NKYPKPCSLVMSCQGKAQNQQEERPQ----LSLDDLVTSNRKGEVLGTIKDSLSNCLSETNLLATVPGLKSRIKGKVRDIYDAGDYLVLITTDRLSAFDRNLASIPFKGQVLNETSLWWFNNTQHITPNAIVSSPDRNVVIAKKCSVFPIEFVVRGYVTGSTDTSLWTVYNKGVRNYCGNELSDG-------------------------LVKNQKLPANILTPTTK 239          

HSP 2 Score: 24.2534 bits (51), Expect = 5.596e-75
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  826 KAEDHDVRVTPDEI 867
            KA DHDV ++P+EI
Sbjct:  239 KAADHDVPISPNEI 252          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR7_VIGAC (Phosphoribosylaminoimidazole-succinocarboxamide synthase, chloroplastic (Fragment) OS=Vigna aconitifolia GN=PUR7 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.033e-67
Identity = 128/195 (65.64%), Postives = 148/195 (75.90%), Query Frame = 2
Query:  248 DAVISSNRKAELLGDI-KGSLSNRLSETNLHLTVPGLKSKTRGKVRDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTR 829
            D++++S  + +++  I K ++SN LSETNLH TVPGL SKTRGKVRDIYD GDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWF++T+ I PNAV+S+PDKNVTIAKKCSV PVEFV RGFVTGSTDTSLWTVYNKG R YCG+ LPDG+                          + QKL  NI+TPTT+
Sbjct:   46 DSLVNSPHRNDVVDVIRKSAISNCLSETNLHNTVPGLVSKTRGKVRDIYDAGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFERTKQIVPNAVVSAPDKNVTIAKKCSVFPVEFVARGFVTGSTDTSLWTVYNKGARNYCGNVLPDGMV-------------------------KNQKLSENILTPTTK 215          

HSP 2 Score: 28.1054 bits (61), Expect = 1.033e-67
Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  826 KAEDHDVRVTPDEI 867
            KA DHDV VTPDEI
Sbjct:  215 KAADHDVPVTPDEI 228          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR7_LEGPL (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Legionella pneumophila (strain Lens) GN=purC PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.347e-43
Identity = 87/159 (54.72%), Postives = 105/159 (66.04%), Query Frame = 2
Query:  362 KTRGKVRDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTRPKI 838
            K +GKVRD YD GD L+LVTTDRQSAFDR LA++P+KGQVLN TS+WWF  T+ I PN +I+ PD NV IAKKC + PVEFVVRG+++GST TSLWT Y KG+R YCG   PDG                         L + QKL + +ITPTT+  I
Sbjct:   15 KYKGKVRDTYDLGDQLILVTTDRQSAFDRCLAAVPYKGQVLNLTSVWWFKNTQSIVPNHLIAVPDPNVAIAKKCKIFPVEFVVRGYISGSTSTSLWTQYQKGVREYCGITFPDG-------------------------LRKNQKLESPVITPTTKETI 148          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR7_LEGPA (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Legionella pneumophila (strain Paris) GN=purC PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.191e-42
Identity = 85/156 (54.49%), Postives = 104/156 (66.67%), Query Frame = 2
Query:  362 KTRGKVRDIYDGGDYLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTR 829
            K +GKVRD YD GD L+LVTTDRQSAFDR LA++P+KGQVLN TS+WWF  T+ I PN +I+ PD NV IAKKC + P+EFVVRG+++GST TSLWT Y KG+R YCG   PDG                         L + QKL + +ITPTT+
Sbjct:   15 KYKGKVRDTYDLGDQLILVTTDRQSAFDRCLAAVPYKGQVLNLTSVWWFKNTQSIVPNHLIAVPDPNVAIAKKCKIFPIEFVVRGYISGSTSTSLWTQYQKGVREYCGITFPDG-------------------------LRKNQKLESPVITPTTK 145          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR72_AGRT5 (Putative phosphoribosylaminoimidazole-succinocarboxamide synthase 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=purC2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.157e-29
Identity = 70/163 (42.94%), Postives = 99/163 (60.74%), Query Frame = 2
Query:  344 VPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTR 829
            +P L +  RGKVR+ YD  D   ++++TDR SAFD+IL  IP+KGQVL +T+ +WF+QT+ I PN V+S PD NV I K+  ++PVE VVRG++ G+T TS+ T+Y KG R   G +LPDG                         + + Q LP  +ITPT++
Sbjct:    9 IPELPNYYRGKVRENYDLPDGNRIIISTDRLSAFDQILTCIPYKGQVLTQTARYWFEQTKDICPNHVVSYPDPNVVIGKRLDILPVEVVVRGYLAGTTGTSILTLYKKGERQMYGMSLPDG-------------------------MKDNQILPEPVITPTSK 146          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR72_CAUCR (Putative phosphoribosylaminoimidazole-succinocarboxamide synthase 2 OS=Caulobacter crescentus GN=purC2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.279e-28
Identity = 73/163 (44.79%), Postives = 95/163 (58.28%), Query Frame = 2
Query:  344 VPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTR 829
            +P L +  RGKVRD YD  D   V+V +DR SAFDR L ++P KGQVL ET+ +WFD T  I PN V++ PD NV I K+  ++PVE VVRG++ G+T TS+ T+YNKG R   G  LPDG                         L   Q+LP  I+TPT++
Sbjct:   14 LPCLPNHYRGKVRDNYDLPDGRRVIVASDRLSAFDRNLCAVPGKGQVLTETARFWFDATADICPNHVVAYPDPNVLIGKRLKMLPVELVVRGYLAGTTSTSILTLYNKGERQMYGVTLPDG-------------------------LKANQRLPQAILTPTSK 151          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR72_RHILO (Putative phosphoribosylaminoimidazole-succinocarboxamide synthase 2 OS=Rhizobium loti GN=purC2 PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 7.016e-27
Identity = 65/163 (39.88%), Postives = 93/163 (57.06%), Query Frame = 2
Query:  344 VPGLKSKTRGKVRDIYDGGD-YLVLVTTDRQSAFDRILASIPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTR 829
            +P L    +GKVR+ YD  D   +++ TDR SAFD IL SIPFKG++L +T+ +WF++T  I PN V+  PD NV +  +  ++PVE VVRG++ G+T TS+ T Y +G R   G  LPDG                         L + +KL A +ITPT++
Sbjct:    9 IPELPGYYKGKVRENYDLADGRRIIIATDRLSAFDIILTSIPFKGEILTQTARYWFEETADICPNHVLEYPDPNVVVGTRLDILPVEIVVRGYLAGTTSTSILTRYRRGEREMYGMRLPDG-------------------------LRDNEKLAAPVITPTSK 146          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR7_BACFR (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Bacteroides fragilis GN=purC PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.496e-24
Identity = 66/173 (38.15%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  326 TNLHLTVPGLKSKTRGKVRDIYD-GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTRPKI 838
            T      PG KS   GKVRD+Y+  G+ LV+V TDR SAFD +L   IP+KGQ+LN+ +  + D T  I PN  +++PD  VT+   C   PVE +VRG++ GS     W  Y  G+R  CG  LP+G                         + E QK P  I+TPTT+ ++
Sbjct:    5 TKTDFNFPGQKSVYHGKVRDVYNINGEQLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKLATPDPMVTVGVLCEGFPVEMIVRGYLCGSA----WRAYKNGVREICGVKLPEG-------------------------MKENQKFPEPIVTPTTKAEM 148          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR7_BACFN (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=purC PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.496e-24
Identity = 66/173 (38.15%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  326 TNLHLTVPGLKSKTRGKVRDIYD-GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTRPKI 838
            T      PG KS   GKVRD+Y+  G+ LV+V TDR SAFD +L   IP+KGQ+LN+ +  + D T  I PN  +++PD  VT+   C   PVE +VRG++ GS     W  Y  G+R  CG  LP+G                         + E QK P  I+TPTT+ ++
Sbjct:    5 TKTDFNFPGQKSVYHGKVRDVYNINGEQLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKLATPDPMVTVGVLCEGFPVEMIVRGYLCGSA----WRAYKNGVREICGVKLPEG-------------------------MKENQKFPEPIVTPTTKAEM 148          
BLAST of EY735898 vs. ExPASy Swiss-Prot
Match: PUR7_BACTN (Phosphoribosylaminoimidazole-succinocarboxamide synthase OS=Bacteroides thetaiotaomicron GN=purC PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.259e-24
Identity = 66/173 (38.15%), Postives = 90/173 (52.02%), Query Frame = 2
Query:  326 TNLHLTVPGLKSKTRGKVRDIYD-GGDYLVLVTTDRQSAFDRILAS-IPFKGQVLNETSLWWFDQTRHITPNAVISSPDKNVTIAKKCSVIPVEFVVRGFVTGSTDTSLWTVYNKGIRXYCGHALPDGVCSI*SLTICSWENFTI*CPIMCYRLGEKQKLPANIITPTTRPKI 838
            T      PG KS   GKVRD+Y+  G+ LV+V TDR SAFD +L   IP+KGQ+LN+ +  + D T  I PN  +++PD  VT+   C   PVE +VRG++ GS     W  Y  G+R  CG  LPDG                         + E +K P  I+TPTT+ ++
Sbjct:    5 TKTDFNFPGQKSVYHGKVRDVYNINGEKLVMVATDRISAFDVVLPEGIPYKGQMLNQIAAKFLDATTDICPNWKMATPDPMVTVGVLCEGFPVEMIVRGYLCGSA----WRTYKSGVREICGVKLPDG-------------------------MRENEKFPEPIVTPTTKAEM 148          
The following BLAST results are available for this feature:
BLAST of EY735898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PUR7_ARATH5.596e-7556.09Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_VIGAC1.033e-6765.64Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_LEGPL5.347e-4354.72Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_LEGPA1.191e-4254.49Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR72_AGRT51.157e-2942.94Putative phosphoribosylaminoimidazole-succinocarbo... [more]
PUR72_CAUCR1.279e-2844.79Putative phosphoribosylaminoimidazole-succinocarbo... [more]
PUR72_RHILO7.016e-2739.88Putative phosphoribosylaminoimidazole-succinocarbo... [more]
PUR7_BACFR2.496e-2438.15Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_BACFN2.496e-2438.15Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]
PUR7_BACTN3.259e-2438.15Phosphoribosylaminoimidazole-succinocarboxamide sy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-D12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735898 ID=EY735898; Name=EY735898; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGCAACAATGGCTGAGTGTATGCGTACAACCTTAAACCCTC
CAAAAACCCCACTTCACAGCAACAAAATCTCAGCTCCAAAACTCTCATTC
TCATCTTCTTTCTCTTCATTTGGAACAAAACCCAATTCTTCTAATTCAAA
CAATTATCCAAGAATCTCTCTATCTGTCATGTCCAACAAGAACCAGAACC
AGAACCAGAACCAAAACCACCACCACCACCAACAATACTTGTCTCTTGAT
GCTGTGATTAGCAGCAATCGCAAAGCAGAGCTTCTTGGTGACATCAAAGG
CTCGCTTTCGAACCGTCTCTCCGAGACAAATCTTCACTTGACTGTTCCCG
GTCTCAAATCCAAAACCAGGGGCAAGGTGAGAGATATTTATGATGGCGGG
GATTATCTTGTTCTGGTGACAACGGACCGCCAAAGTGCGTTCGATAGAAT
TCTTGCTTCTATTCCCTTCAAAGGCCAGGTTCTTAATGAAACGAGTTTGT
GGTGGTTTGATCAAACTAGGCACATAACTCCAAATGCAGTCATTTCATCT
CCGGATAAAAATGTTACAATTGCGAAGAAGTGTTCTGTTATCCCTGTTGA
ATTTGTAGTCAGAGGTTTTGTGACTGGAAGTACTGATACCTCTCTGTGGA
CGGTTTACAATAAAGGCATCCGANATTATTGTGGCCATGCTCTCCCAGAT
GGTGTGTGTTCCATTTGATCATTGACCATTTGTTCCTGGGAAAATTTTAC
TATTTGATGCCCCATTATGTGTTATAGGCTTGGTGAAAAACAAAAACTTC
CTGCAAACATAATCACTCCAACTACAAGGCCGAAGATCATGATGTTCGTG
TAACTCCAGATGAGATAG
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