EY735896

Overview
NameEY735896
Unique NameEY735896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CLL7_ARATH (4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana GN=4CLL7 PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 3.384e-69
Identity = 136/244 (55.74%), Postives = 175/244 (71.72%), Query Frame = 3
Query:   72 MEKSGYGRDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIAASLMTSAHQQFVGELDRLMRRALPI 803
            MEKSGYGRDGIYRSL P LVLP DP+ S+V+FLFRNS+SY SKLA+ D+++ +SL+FSQ KS V +++H F  LGI K DVVLIFAPNS  FP+CFL V AIG + +TANP+YTV+E+SKQ+KDSNPK++I+V +L+DK+K  +LP VLLGSKD                F +++E S  V++ P V +KQ+  AAL YSSGTT   +GV LTH N IAASLM +  Q  +GE   +    LP+
Sbjct:    1 MEKSGYGRDGIYRSLRPTLVLPKDPNTSLVSFLFRNSSSYPSKLAIADSDTGDSLTFSQLKSAVARLAHGFHRLGIRKNDVVLIFAPNSYQFPLCFLAVTAIGGVFTTANPLYTVNEVSKQIKDSNPKIIISVNQLFDKIKGFDLPVVLLGSKD--TVEIPPGSNSKILSFDNVMELSEPVSEYPFVEIKQSDTAALLYSSGTTGTSKGVELTHGNFIAASLMVTMDQDLMGEYHGVFLCFLPM 242          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 3.776e-36
Identity = 88/231 (38.10%), Postives = 131/231 (56.71%), Query Frame = 3
Query:   69 SMEKSGYGRDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSD-ESLSFSQFKSIVIKVSHSFR-HLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIAASLMTSAHQ 755
            S+  +GYG DG+YRSL PP  + SDP  S+ + L R + +  S +AL DA +   +L+F++ +S V+  + +     G+   D VL+ APN + +P+CF  V A+GA+ +T NP YT  E++KQV D+  KLVIT+  L  K+  L LP +LL   D                + +L+       D     +KQ+  AAL YSSGTT   +GV+LTH+N IAA+ M ++ Q
Sbjct:    5 SVPAAGYGADGVYRSLRPPAPVASDPGLSLTDLLLRRADACPSAVALADAAAGGRALTFAELRSAVLSTAVALSSRAGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTTVNPDYTPREIAKQVSDARAKLVITISALVPKIAGLRLPVILL-DDDANAAAASLPPDATVTLYTNLVA-GVKEADYRRPPIKQSDTAALLYSSGTTGDSKGVILTHRNFIAAARMVTSDQ 233          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CLL2_ORYSJ (4-coumarate--CoA ligase-like 2 OS=Oryza sativa subsp. japonica GN=4CLL2 PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.590e-26
Identity = 78/211 (36.97%), Postives = 115/211 (54.50%), Query Frame = 3
Query:   99 GIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIA 728
            G+Y SL PPL LPSDPS S+V  LF +   +   L L+DA +  +LS + F+ +V  ++   R  L I +  +VL+  PNS+ FP+ FL V+A GA+A+T NP    +E++ +++D+ P LV+       K+  L  P VL+                    FH L+E          V V Q  AAA+ YSSGT+   +GV++TH+NLIA
Sbjct:   21 GLYSSLHPPLPLPSDPSLSLVPHLFSHLPLHHHSL-LVDAPTAATLSCADFRRLVSSLAAGLRRRLHIARGSLVLLLLPNSLTFPVAFLAVLATGAVATTMNPSSAPAEIAARLRDTAPSLVLASTHNAAKLPPLAAPLVLV----PDTFQQQHDDDQFDFFFHALLETDPETPVEMGVGVGQDDAAAVLYSSGTSGRSKGVVVTHRNLIA 226          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.116e-25
Identity = 73/220 (33.18%), Postives = 122/220 (55.45%), Query Frame = 3
Query:   78 KSGY-GRDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDL--NLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIA 728
            +SG+   +  + S   P+ LP +PS  +  F+  +S ++  ++A IDA++ ++L+F++    V  V+     +GI K  VVL+ +PNSI FP+  L V+++GAI +T NP+ T +E++KQ+KDSNP L  T  +L  K+      LP VL+  +                   ++++   S   + +  V Q   A L YSSGTT + +GV+ +H+NLIA
Sbjct:    7 RSGFCNSNSTFYSKRTPIPLPPNPSLDVTTFI--SSQAHRGRIAFIDASTGQNLTFTELWRAVESVADCLSEIGIRKGHVVLLLSPNSILFPVVCLSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEERVDSVGDVRRLV-------EMMKKEPSGNRVKE-RVDQDDTATLLYSSGTTGMSKGVISSHRNLIA 216          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CLL8_ARATH (4-coumarate--CoA ligase-like 8 OS=Arabidopsis thaliana GN=4CLL8 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.726e-25
Identity = 78/209 (37.32%), Postives = 107/209 (51.20%), Query Frame = 3
Query:  105 YRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIA 728
            + S   PL LPS  S  +  F+  +S +Y  K A IDA +D  +SFS     V +V+    H +GI + DVVL+ +PN+I  PI  L V+++GA+ +TANP+ T SE+ +Q+ DSNPKL  T PEL  K+    +  VL   +D                     E SG         V +   A L YSSGTT   +GV  +H NLIA
Sbjct:   24 FYSKRKPLALPSKESLDITTFI--SSQTYRGKTAFIDAATDHRISFSDLWMAVDRVADCLLHDVGIRRGDVVLVLSPNTISIPIVCLSVMSLGAVLTTANPLNTASEILRQIADSNPKLAFTTPELAPKIASSGISIVLERVEDTLRVPRGLKVVGNLTEMMKK-EPSGQAV---RNQVHKDDTAMLLYSSGTTGRSKGVNSSHGNLIA 226          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.140e-24
Identity = 78/242 (32.23%), Postives = 125/242 (51.65%), Query Frame = 3
Query:   93 RDGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRH-LGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIAAS---LMTSAHQQFVGELDRLMRRALPIC 806
            + GIY S  P L LP DP+   V+ LF  S  +    ALID+ +  S+S ++ + +V  ++    H LG+ + DVV +  PNS++FP+ FL +I++GAI +T NP  ++ E+ KQV + +  L  T  E  +K+  L +  + +                    F+ +++   S   +P   +KQ   AA+ YSSGTT   +GV+LTH+NLIA+    +   A Q        +   ALP+C
Sbjct:   28 KTGIYTSKFPSLHLPVDPNLDAVSALF--SHKHHGDTALIDSLTGFSISHTELQIMVQSMAAGIYHVLGVRQGDVVSLVLPNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIKKQVSECSVGLAFTSTENVEKLSSLGVSVISVSES-----YDFDSIRIENPKFYSIMK--ESFGFVPKPLIKQDDVAAIMYSSGTTGASKGVLLTHRNLIASMELFVRFEASQYEYPGSSNVYLAALPLC 260          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CLL2_ARATH (4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana GN=4CLL2 PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.539e-24
Identity = 85/247 (34.41%), Postives = 126/247 (51.01%), Query Frame = 3
Query:   78 KSGYGRD-GIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKV---KDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIAASLMTSAHQQFVGELDRLMRRALPIC 806
            KSG+     I+ S   P+ LP +    + +F+   S  +  K   +DA +   LSF +    V +V+     LG+ K +VV+I +PNSI FPI  L V+++GAI +TANP+ T  E+SKQ+ DS P L  T  +L  K+    + NLP VL+                       +IE   S + +    V Q   AAL YSSGTT   +GVML+H+NLIA   +  A++   G L++     +P+C
Sbjct:   24 KSGFCESTSIFYSKREPMALPPNQFLDVTSFIA--SQPHRGKTVFVDAVTGRRLSFPELWLGVERVAGCLYALGVRKGNVVIILSPNSILFPIVSLSVMSLGAIITTANPINTSDEISKQIGDSRPVLAFTTCKLVSKLAAASNFNLPVVLMDDY-HVPSQSYGDRVKLVGRLETMIETEPSESRVKQ-RVNQDDTAALLYSSGTTGTSKGVMLSHRNLIA---LVQAYRARFG-LEQRTICTIPMC 262          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CLL1_ARATH (4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana GN=4CLL1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.539e-24
Identity = 67/226 (29.65%), Postives = 119/226 (52.65%), Query Frame = 3
Query:  102 IYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIA--ASLMTSAHQQFVGEL 773
            I+RSL P + +P     ++  F+ +    Y+  +A ++A + +++++        +++ +   LG+ K  V+++  PN   + I  LG+++ G + S ANP   VSE+ KQV+ S  + +IT    ++KVK L LP ++LG +                 + DL+E      D  +  + QT   AL +SSGTT +Q+GVMLTH+NLIA   S +     + +G++
Sbjct:   12 IFRSLYPSVPIPD--KLTLPEFVLQGVEEYTENVAFVEAVTGKAVTYGDVVRDTKRLAKALTSLGLRKGQVMVVVLPNVAEYGIIALGIMSAGGVFSGANPTALVSEIKKQVEASGARGIITDATNYEKVKSLGLPVIVLGEE----------KIEGAVNWKDLLEAGDKCGDTDNEEILQTDLCALPFSSGTTGLQKGVMLTHRNLIANLCSTLFGVRSEMIGQI 225          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CL2_SOLTU (4-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=4CL2 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.316e-24
Identity = 74/225 (32.89%), Postives = 116/225 (51.56%), Query Frame = 3
Query:   96 DGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIAASLMTSAHQQFVGE 770
            D I+RS  P + +P      + ++ F N + ++S+  LID  +D   ++++ +    KV+     LGI +KD ++I  PN   F   F+G   +GAI++ ANP++T +E+ KQ K S+ K+VIT      KVKD  +       ++                F +LI+      +IPDV ++     AL YSSGTT + +GVMLTH+ L+     TS  QQ  GE
Sbjct:   12 DLIFRSKLPDIYIPKH--LPLHSYCFENLSEFNSRPCLIDGANDRIYTYAEVELTSRKVAVGLNKLGIQQKDTIMILLPNCPEFVFAFIGASYLGAISTMANPLFTPAEVVKQAKASSAKIVITQACFAGKVKDYAI-------ENDLKVICVDSAPEGCVHFSELIQ--SDEHEIPDVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLV-----TSVAQQVDGE 220          
BLAST of EY735896 vs. ExPASy Swiss-Prot
Match: 4CL1_TOBAC (4-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=4CL1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.316e-24
Identity = 73/225 (32.44%), Postives = 117/225 (52.00%), Query Frame = 3
Query:   96 DGIYRSLTPPLVLPSDPSFSMVNFLFRNSASYSSKLALIDANSDESLSFSQFKSIVIKVSHSFRHLGITKKDVVLIFAPNSIHFPICFLGVIAIGAIASTANPVYTVSELSKQVKDSNPKLVITVPELWDKVKDLNLPAVLLGSKDXXXXXXXXXXXXXXXXFHDLIE*SGSVTDIPDVSVKQTHAAAL*YSSGTTAVQEGVMLTHQNLIAASLMTSAHQQFVGE 770
            D I+RS  P + +P      + ++ F N + +SS+  LI+  +D+  ++++ +    KV+     LGI +KD ++I  PNS  F   F+G   +GAI++ ANP++T +E+ KQ K S+ K++IT      KVKD         S++                F +L +      +IP+V ++     AL YSSGTT + +GVMLTH+ L+     TS  QQ  GE
Sbjct:   14 DLIFRSKLPDIYIPKH--LPLHSYCFENISEFSSRPCLINGANDQIYTYAEVELTCRKVAVGLNKLGIQQKDTIMILLPNSPEFVFAFMGASYLGAISTMANPLFTPAEVVKQAKASSAKIIITQSCFVGKVKD-------YASENDVKVICIDSAPEGCLHFSELTQ--SDEHEIPEVKIQPDDVVALPYSSGTTGLPKGVMLTHKGLV-----TSVAQQVDGE 222          
The following BLAST results are available for this feature:
BLAST of EY735896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
4CLL7_ARATH3.384e-6955.744-coumarate--CoA ligase-like 7 OS=Arabidopsis thal... [more]
4CLL1_ORYSJ3.776e-3638.104-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
4CLL2_ORYSJ1.590e-2636.974-coumarate--CoA ligase-like 2 OS=Oryza sativa sub... [more]
4CLL5_ARATH5.116e-2533.184-coumarate--CoA ligase-like 5 OS=Arabidopsis thal... [more]
4CLL8_ARATH8.726e-2537.324-coumarate--CoA ligase-like 8 OS=Arabidopsis thal... [more]
4CLL6_ARATH1.140e-2432.234-coumarate--CoA ligase-like 6 OS=Arabidopsis thal... [more]
4CLL2_ARATH2.539e-2434.414-coumarate--CoA ligase-like 2 OS=Arabidopsis thal... [more]
4CLL1_ARATH2.539e-2429.654-coumarate--CoA ligase-like 1 OS=Arabidopsis thal... [more]
4CL2_SOLTU3.316e-2432.894-coumarate--CoA ligase 2 OS=Solanum tuberosum GN=... [more]
4CL1_TOBAC3.316e-2432.444-coumarate--CoA ligase 1 OS=Nicotiana tabacum GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-D10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735896 ID=EY735896; Name=EY735896; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGATCTGATCAAAGTTTGAAAAACAAAATCATTAATTCTCG
TGTCGTTATTGTTTAGTTTCAATGGAGAAATCTGGTTATGGCCGTGATGG
TATCTACAGATCTTTAACGCCACCTTTGGTTCTTCCCAGTGACCCCAGTT
TTTCTATGGTTAATTTTCTCTTTAGAAACTCTGCTTCTTATAGCTCCAAA
TTAGCACTTATTGATGCTAATTCTGATGAATCTTTGTCTTTTTCCCAGTT
CAAATCCATTGTGATCAAGGTTTCTCATAGCTTTCGCCATCTGGGCATTA
CGAAAAAAGATGTTGTTTTGATTTTTGCTCCAAATTCAATTCATTTCCCT
ATTTGCTTTCTTGGTGTCATTGCTATAGGCGCTATAGCATCAACTGCGAA
TCCTGTTTACACGGTCTCTGAGCTTTCAAAGCAAGTCAAGGATTCCAATC
CAAAACTTGTTATTACAGTCCCTGAATTATGGGACAAAGTTAAAGACTTA
AACTTGCCAGCTGTCCTTTTAGGTTCAAAAGATAAGGTTTCTTCTTCTGG
TCTTATTTCAAGAAGCTCTAAGATTGTGTCTTTTCATGACTTGATTGAAT
GATCTGGGAGTGTAACAGATATTCCAGATGTGTCTGTTAAGCAAACACAT
GCTGCTGCTCTGTAGTACTCTTCAGGGACAACTGCTGTGCAGGAGGGTGT
CATGTTGACGCACCAAAATCTCATTGCAGCATCTTTGATGACAAGTGCGC
ACCAACAATTCGTCGGTGAGTTAGATCGCCTGATGCGACGTGCTCTGCCC
ATATGTATTTAATAAGGCCCACCCTACTTTCCACCACAACTCCCCAGCGG
ACACTCGTGTTGGGAAAAGGGGGAGTGG
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