EY735891

Overview
NameEY735891
Unique NameEY735891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735891 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.263e-24
Identity = 37/82 (45.12%), Postives = 45/82 (54.88%), Query Frame = 1 
Query:   58 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXXXXXXXXXXXXRKDNVWRSVFHP 303
            +L+KLWDD+VAGPQP+RGLG LRK+   PL +K+ GE+           S                    RKDNVWRSVFHP
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKV-PQPLNLKDEGES-----------SKITMPTTPTTPVTPTTPISARKDNVWRSVFHP 72

HSP 2 Score: 66.2402 bits (160), Expect = 4.263e-24
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 2 
Query:  296 FTPXSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 421
            F P SNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   70 FHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of EY735891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN4.263e-2445.12Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-D05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735891 ID=EY735891; Name=EY735891; organism=Citrus sinensis; type=EST; length=796bp
CCACGCGTCCGAGAGGTTAAAGATTTAGAAACTAGCAGCTAAATTGTAAA
TTTAAAGATGCTAGAGAAGCTTTGGGACGATGTTGTGGCAGGGCCTCAGC
CTGATCGTGGCCTTGGCAGGCTGAGGAAAATCACCACAACACCCTTAGCA
GTCAAAGAGGGTGGTGAGGCGGAGTCGTCGTCGGGCAAGTTCCAGAGGTC
TCTGTCAATGCCAGCGAGTCCAGGGGCACCGTCGACGCCAGTGACGCCGA
CGACGCCGCTGTCGGCGCGTAAGGACAACGTGTGGAGGAGCGTGTTTCAC
CCCGNGTAGCAACCTTGCTACTAGGGGTATCGGTGCAGAGGTCTTTGACA
AGCCCACACATCCTAACTCTCCCACTGTTTATGACTGGCTTTACAGTGGG
GAGACTAGGAGCAAGCATCATCACTAGTGGATGATACGCTACAGCGATGT
AAATGAATGTGATGGGTCACCAACTCACCGGATGAGTTGCCTGTAGTCTG
TAGATAGTGTCGTTTCGTTTTGGATTTCGCAACGTGTCCTTGTCGTTTTG
TTAATGCTATTTGTATTACGTGTCCTTCCTATCTAGAGTTTGGGTTTAAA
ATGCTGCTGACTAAAAGTCAATTACAGACTGTGAGGTTNNNANNACATAT
AATTTAATACTTGTATGTAATTTGAAGATTTCTCACCTCTTNCCTCAAAA
CAAACAGTTCCTCTTTATGGGCTACATAACATTCTCCCACGTGCACCTTC
GCGGCGACCCCATCCCCCGTGCGGGGCGGGCGGCGGGCGGCGGGGT
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