EY735887

Overview
NameEY735887
Unique NameEY735887
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5762 contig Csv1_Contig5762:616..1495. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: SF3B4_RAT (Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.162e-93
Identity = 173/261 (66.28%), Postives = 201/261 (77.01%), Query Frame = 1
Query:  100 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTKGDRHGTPAERIWAANNPSSQKSRPHTLFASGTSIIQNAPQANGSCGGTVPPPAY-SNGAASWPLPPGRATRARGETCTSPPHPV 879
            +ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT  HQGYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+K+D+KG+RHG+ AER+ AA NP SQ  RPH LFA              S G  +PPP     G+   P+PP  A    G     PP P+
Sbjct:    7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGAL-PPGIPPAMPPPPM 266          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: SF3B4_MOUSE (Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.162e-93
Identity = 173/261 (66.28%), Postives = 201/261 (77.01%), Query Frame = 1
Query:  100 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTKGDRHGTPAERIWAANNPSSQKSRPHTLFASGTSIIQNAPQANGSCGGTVPPPAY-SNGAASWPLPPGRATRARGETCTSPPHPV 879
            +ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT  HQGYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+K+D+KG+RHG+ AER+ AA NP SQ  RPH LFA              S G  +PPP     G+   P+PP  A    G     PP P+
Sbjct:    7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGAL-PPGIPPAMPPPPM 266          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: SF3B4_HUMAN (Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1)

HSP 1 Score: 343.199 bits (879), Expect = 1.162e-93
Identity = 173/261 (66.28%), Postives = 201/261 (77.01%), Query Frame = 1
Query:  100 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTKGDRHGTPAERIWAANNPSSQKSRPHTLFASGTSIIQNAPQANGSCGGTVPPPAY-SNGAASWPLPPGRATRARGETCTSPPHPV 879
            +ERNQDAT YVG LD +V+E LLWELF+QAGPVVN ++PKDRVT  HQGYGFVEF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+K+D+KG+RHG+ AER+ AA NP SQ  RPH LFA              S G  +PPP     G+   P+PP  A    G     PP P+
Sbjct:    7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGAL-PPGIPPAMPPPPM 266          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: SF3B4_CAEEL (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2)

HSP 1 Score: 318.161 bits (814), Expect = 4.001e-86
Identity = 161/259 (62.16%), Postives = 193/259 (74.52%), Query Frame = 1
Query:  103 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTKGDRHGTPAERIWAANNPSSQKSRPHTLFAS-GTSIIQNAPQANGSCGGTVPPPAYSNGAASWPLPPGRATRARGETCTSPPHP 876
            ERNQDAT YVG LD +V+E +LWEL VQAGPVV+V +PKDRVT  HQG+GFVEF  EEDADYAIK+LNMIKLYGKPI+VNKAS  +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI+  PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+KRD+KG+RHGT AER+ AA NP   K RPH +F+     +  N P A       +   A++ G   +  PP       G     PP P
Sbjct:    8 ERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAI--AAHATGRPGYQPPPLMGMAQSGYQGQYPPVP 264          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: SAP49_SCHPO (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe GN=sap49 PE=2 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 3.522e-66
Identity = 131/258 (50.78%), Postives = 177/258 (68.60%), Query Frame = 1
Query:  103 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTKGDRHGTPAER-IWAANNPSSQKSRPHTLFASGTSIIQNAPQANGSCGGTVPPPAYSNGAASWPLPPGRATRARGETCTSPP 870
            +RNQDAT Y+GNLD +VT+ +L+EL +QAGPVVN+++P+DRV N H G+GF EF  E+D +YA ++LN +KL+GKPIRVN+ASQD+  +  +GANLF+GNLDP VDE++LYDTFSA G +V  P++ RD + G S+G+GF+SYDSFE +DAAIEAMN Q+L N+ ITVSYA+KR+ KG+RHG  AER + AA   +     P +    G S    AP +  +   T+         A+  +PP       G T   PP
Sbjct:    6 DRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARD-ENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGERHGDIAERKLAAAAKKNKVAVTPQSTLPPGFSPATPAPTSAANTPATI---------AATSIPPVPNVPLVGATTAVPP 253          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: SF3B4_DICDI (Splicing factor 3B subunit 4 OS=Dictyostelium discoideum GN=sf3b4 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.296e-60
Identity = 120/238 (50.42%), Postives = 168/238 (70.59%), Query Frame = 1
Query:  103 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTKGDRHGTPAERIWAANNPS---SQKSRPHTLFASGTSIIQNA--PQANGSCGGTVPPPAYSNG 801
            ERN +A   + +LDP VTE LL ELF+QA PVV V++PKD++T  H G  +VEF+S  DA+YA+KV+  ++L+ K I++ K ++DK  +D+GANLFIGNLD DVDE++L+DTFS FG I+  PK+MRD + G S+GF FI++DSFEASDAAIEAMN Q+LCN+ I+V+YA K+D+  +RHG+ AERI AA+  +   +Q+ +  +   S TS I  +   Q        +PPP  + G
Sbjct:    8 ERNHEACLLIRDLDPMVTESLLMELFIQAAPVVKVFIPKDKLTQQHSGRAYVEFQSSSDAEYALKVMKFVRLFNKEIKIKKENKDK--VDIGANLFIGNLDADVDERILHDTFSRFGTIIFTPKVMRD-ENGVSKGFAFINFDSFEASDAAIEAMNSQFLCNKPISVTYARKKDS-NERHGSSAERIIAASRNTGYLNQQQQQQSSSTSSTSTISTSTPQQQQQQQSQPLPPPIVTAG 241          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 6.274e-31
Identity = 72/169 (42.60%), Postives = 109/169 (64.50%), Query Frame = 1
Query:  118 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKR 621
            A+ YVG LDP VTE +L+ELF   GPV ++ V +D VT    GY +V F + ED + A+  LN   + G+P R+  + +D     +G  N+FI NLDP +D K L+DTFSAFG I+ + K+  D + GN++G+GF+ +DS E+++AAIE +NG  L ++++ V +   R
Sbjct:   80 ASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKIL-SCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSR 246          

HSP 2 Score: 98.2117 bits (243), Expect = 6.508e-20
Identity = 80/254 (31.50%), Postives = 125/254 (49.21%), Query Frame = 1
Query:  127 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTKGDRHGTPAERIWAANNPSSQKSRPHTLFASGTSIIQ---NAPQANGSCGGTVPPPAYSNGAASWPLPPG 828
            Y+ NLD ++TE+   +LF Q G + ++ + KD+  +  +G+GFV + + E A  A+  LN  +  GK + V +A +                 +K +   G NLFI NL  +VD++ L   FSAFG I T+ KIM D + G S+GFGF+ Y + E ++ A+  MN + L  + + V+ A +++    R      +I A N    Q+       A+G   +Q     P   G   G  P PA  NG    P+ PG
Sbjct:  264 YIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTI-TSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRKEV---RRSQLEAQIQARNQFRLQQ---QVAAAAGIPAVQYGATGPLIYGP--GGYPIPAAVNG-RGMPMVPG 505          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: HSH49_YEAST (Protein HSH49 OS=Saccharomyces cerevisiae GN=HSH49 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.312e-30
Identity = 68/194 (35.05%), Postives = 116/194 (59.79%), Query Frame = 1
Query:  121 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVL-NMIKLYGKPIRVNKASQDKKSLDVGAN-----------LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTKGD-RHGTPAERI 663
            T YVGN+DP++T+E L+ELF+Q  PV+ +  PKD+V   +QGY F+EF ++ DA YAIK++ N ++LY + I+V + +    + ++ +N           LFI NL   +D   L   F+ FG ++  P+I     +       ++ ++ FE +D AI+++N Q + N +ITV YA+K + KG+ ++G   +R+
Sbjct:   10 TVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKIMNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNLADSIDSDQLVKIFNKFGKLIREPEIFY--LSNGKLKCAYVYFEDFEKADLAIKSLNNQLVANNRITVDYAFKENGKGNAKYGDDVDRL 201          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: PABP_YARLI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.183e-29
Identity = 70/168 (41.67%), Postives = 109/168 (64.88%), Query Frame = 1
Query:  103 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 603
            ++  +A+ YVG LDP VTE +L+E+F   GPV +V V +D +T    GY +V F ++ D   A++ LN   +  +P R+  + +D      GA N++I NLDP +D K L+DTFSAFG I+ + KI  D + GNSRGFGF+ Y+S E++++AI+ +NG  L ++++ V
Sbjct:   41 DQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQIL-SCKIATD-EFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFV 206          

HSP 2 Score: 72.0182 bits (175), Expect = 4.995e-12
Identity = 51/193 (26.42%), Postives = 91/193 (47.15%), Query Frame = 1
Query:  103 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTK 630
            ++N     ++ NL  ++TE    EL  + G   +V++  +       G+GFV+++  + A  AI  L+  +  G  +   +A +  +  D                  G NL+I NLD  +D+  L   F+  G I T+ K+M D + G S+GFGF+ Y S E +  A+  MN + +  + + V  A ++D +
Sbjct:  222 QKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTND-EGKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTI-TSAKVMVD-EAGKSKGFGFVCYSSPEEATKAVTEMNHRLVAGKPLYVVLAQRKDVR 411          
BLAST of EY735887 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.183e-29
Identity = 78/182 (42.86%), Postives = 112/182 (61.54%), Query Frame = 1
Query:   88 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTK 630
            G  +A +  + + YVG+LD  VT+  L++ F Q G VV V V +D VT    GYG+V F + +DA  AI+ LN I LYGKPIRV  + +D      GA N+FI NLD  +D K L+DTFS+FG IV + K+  D  +G S+G+GF+ Y + E++  AIE +NG  L ++Q+ V    +R  +
Sbjct:   26 GGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIV-SCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQER 205          

HSP 2 Score: 84.3445 bits (207), Expect = 9.725e-16
Identity = 57/195 (29.23%), Postives = 102/195 (52.31%), Query Frame = 1
Query:   97 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSLDV--------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKRDTK 630
            +A + +    YV NL    T++ L   F + G + +  V KD      +G+GFV F + +DA  A++ LN  K   K     R  K S+ +  L V               +NL++ NLDP + ++ L + FS FG  VT+ K+MRDP+ G S+G GF+++ + E +  A+  ++G+ + ++ + V+ A +++ +
Sbjct:  208 TANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGT-VTSSKVMRDPN-GTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDR 399          
The following BLAST results are available for this feature:
BLAST of EY735887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
SF3B4_RAT1.162e-9366.28Splicing factor 3B subunit 4 OS=Rattus norvegicus ... [more]
SF3B4_MOUSE1.162e-9366.28Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf... [more]
SF3B4_HUMAN1.162e-9366.28Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF... [more]
SF3B4_CAEEL4.001e-8662.16Splicing factor 3B subunit 4 OS=Caenorhabditis ele... [more]
SAP49_SCHPO3.522e-6650.78Spliceosome-associated protein 49 OS=Schizosacchar... [more]
SF3B4_DICDI1.296e-6050.42Splicing factor 3B subunit 4 OS=Dictyostelium disc... [more]
PABP_SCHPO6.274e-3142.60Polyadenylate-binding protein, cytoplasmic and nuc... [more]
HSH49_YEAST5.312e-3035.05Protein HSH49 OS=Saccharomyces cerevisiae GN=HSH49... [more]
PABP_YARLI1.183e-2941.67Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP2_ARATH1.183e-2942.86Polyadenylate-binding protein 2 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-D01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735887 ID=EY735887; Name=EY735887; organism=Citrus sinensis; type=EST; length=880bp
CACGCGTCCGCCCACGCGTCCGAAGAAGTATAACGAGTAAAAGGCATGAC
CACTCGAATCGCTCCTGGAGTTGGGGCCAATTTGCTGGGCCAACACTCCG
CCGAGAGAAATCAAGATGCCACAGCTTATGTCGGCAATCTCGATCCCCAG
GTTACTGAGGAGCTACTTTGGGAGTTGTTTGTTCAAGCAGGTCCTGTTGT
TAATGTGTATGTTCCAAAAGATAGAGTGACAAACCTTCATCAAGGATACG
GATTTGTAGAGTTCCGAAGTGAGGAAGATGCTGATTATGCAATAAAGGTG
CTGAATATGATAAAGCTTTATGGGAAGCCGATACGTGTGAATAAGGCATC
CCAAGACAAAAAGAGCTTAGATGTGGGGGCAAACCTTTTTATTGGAAACC
TTGACCCAGATGTGGATGAGAAACTACTATATGATACATTCAGTGCGTTT
GGAGTCATTGTTACGAATCCCAAGATTATGCGAGATCCTGACACTGGAAA
TTCTCGTGGTTTTGGTTTCATTAGCTATGATTCCTTTGAGGCATCCGATG
CAGCTATTGAGGCAATGAATGGCCAATACCTTTGCAACCGTCAAATTACT
GTCTCATATGCATATAAGAGAGACACTAAAGGAGACCGCCACGGTACTCC
AGCAGAGAGAATTTGGGCAGCAAACAATCCGAGTTCCCAGAAGAGTAGGC
CCCACACTTTATTTGCGAGTGGGACGTCCATCATACAGAATGCTCCTCAG
GCCAATGGTAGCTGTGGGGGGACAGTGCCTCCACCCGCATATTCAAATGG
TGCTGCTTCATGGCCACTTCCCCCGGGTCGAGCAACGAGAGCACGGGGCG
AAACGTGCACATCCCCACCACACCCAGTGG
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