EY735845

Overview
NameEY735845
Unique NameEY735845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length818
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4_MEDTR (Cysteine protease ATG4 OS=Medicago truncatula GN=ATG4 PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 5.705e-69
Identity = 126/176 (71.59%), Postives = 137/176 (77.84%), Query Frame = 3
Query:   45 CHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSRDEDGERGGAPVVCIDDA 572
            CHKI+Q               F QDF SRILI+YRKGFD I DSK TSDV WGCMLRSSQMLVAQALLFH+LGR WRK + KP D+EY++IL LFGDSE + FSIHNLLQAGK YGLA GSWVGPYAMCR+WE LAR QR +   G Q LPMAIYVVS DEDGERGGAPVVCI+DA
Sbjct:  121 CHKISQHESTGDVDIRNVFAAFEQDFFSRILITYRKGFDAIEDSKYTSDVNWGCMLRSSQMLVAQALLFHKLGRSWRKTVDKPVDKEYIDILQLFGDSEAAAFSIHNLLQAGKGYGLAVGSWVGPYAMCRTWEVLARNQREKNEQGEQLLPMAIYVVSGDEDGERGGAPVVCIEDA 296          

HSP 2 Score: 26.1794 bits (56), Expect = 5.705e-69
Identity = 11/35 (31.43%), Postives = 16/35 (45.71%), Query Frame = 1
Query:  577 RHCSVFSKRPADWTPIXXXXXXXXXXEKVNPRVVP 681
            + C  FS+    WTP+          +KVN R +P
Sbjct:  298 KRCLEFSRGLVPWTPLLLLVPLVLGLDKVNLRYIP 332          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_ORYSJ (Cysteine protease ATG4B OS=Oryza sativa subsp. japonica GN=ATG4B PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.332e-64
Identity = 117/186 (62.90%), Postives = 139/186 (74.73%), Query Frame = 3
Query:   45 CHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGL--GCQSLPMAIYVVSRDEDGERGGAPVVCIDDAS*TLFCVF 596
            C+K++                F +DFSSRI I+YR+GFD I DSK TSDV WGCM+RSSQMLVAQAL+FH LGR WR+PL+KP++ EY+ ILH+FGDSE   FSIHNLLQAG +YGLAAGSWVGPYAMCR+W+ L R  R +  +  G +S PMA+YVVS DEDGERGGAPVVCID A+  L C F
Sbjct:  111 CYKLSSEESSSDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRRPLEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAWQTLVRTNREQHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVAA-QLCCDF 295          

HSP 2 Score: 29.261 bits (64), Expect = 2.332e-64
Identity = 11/33 (33.33%), Postives = 17/33 (51.52%), Query Frame = 1
Query:  583 CSVFSKRPADWTPIXXXXXXXXXXEKVNPRVVP 681
            C  F+K  + W+PI          +K+NPR +P
Sbjct:  292 CCDFNKGQSTWSPILLLVPLVLGLDKINPRYIP 324          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_ORYSI (Cysteine protease ATG4A OS=Oryza sativa subsp. indica GN=ATG4A PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.170e-64
Identity = 120/186 (64.52%), Postives = 136/186 (73.12%), Query Frame = 3
Query:   45 CHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRA--ETGLGCQSLPMAIYVVSRDEDGERGGAPVVCIDDAS*TLFCVF 596
            C+K++                F +DFSSRI I+YRKGFD I DSK TSDV WGCM+RSSQMLVAQAL+FH LGR WRKP QKP+  EY+ ILH+FGDSE   FSIHNLLQAGK+YGLAAGSWVGPYAMCR+W+ L R  R   E   G  + PMA+YVVS DEDGERGGAPVVCID A+  L C F
Sbjct:  107 CYKLSSEELSNSSDCESGNAAFLEDFSSRIWITYRKGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAWQTLVRTNREHHEAVDGNGNFPMALYVVSGDEDGERGGAPVVCIDVAA-QLCCDF 291          

HSP 2 Score: 28.4906 bits (62), Expect = 5.170e-64
Identity = 11/33 (33.33%), Postives = 17/33 (51.52%), Query Frame = 1
Query:  583 CSVFSKRPADWTPIXXXXXXXXXXEKVNPRVVP 681
            C  F+K  + W+PI          +K+NPR +P
Sbjct:  288 CCDFNKGQSTWSPILLLVPLVLGLDKLNPRYIP 320          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_ORYSI (Cysteine protease ATG4B OS=Oryza sativa subsp. indica GN=ATG4B PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.146e-63
Identity = 116/186 (62.37%), Postives = 138/186 (74.19%), Query Frame = 3
Query:   45 CHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGL--GCQSLPMAIYVVSRDEDGERGGAPVVCIDDAS*TLFCVF 596
            C+K++                F +DFSSRI I+YR+GFD I DSK TSDV WGCM+RSSQMLVAQAL+FH LGR WR+P +KP++ EY+ ILH+FGDSE   FSIHNLLQAG +YGLAAGSWVGPYAMCR+W+ L R  R +  +  G +S PMA+YVVS DEDGERGGAPVVCID A+  L C F
Sbjct:  111 CYKLSSEESSSDSDSESGHATFLEDFSSRIWITYRRGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRRPSEKPYNPEYIGILHMFGDSEACAFSIHNLLQAGNSYGLAAGSWVGPYAMCRAWQTLVRTNREQHEVVDGNESFPMALYVVSGDEDGERGGAPVVCIDVAA-QLCCDF 295          

HSP 2 Score: 29.261 bits (64), Expect = 1.146e-63
Identity = 11/33 (33.33%), Postives = 17/33 (51.52%), Query Frame = 1
Query:  583 CSVFSKRPADWTPIXXXXXXXXXXEKVNPRVVP 681
            C  F+K  + W+PI          +K+NPR +P
Sbjct:  292 CCDFNKGQSTWSPILLLVPLVLGLDKINPRYIP 324          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_ORYSJ (Cysteine protease ATG4A OS=Oryza sativa subsp. japonica GN=ATG4A PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 6.137e-62
Identity = 119/186 (63.98%), Postives = 135/186 (72.58%), Query Frame = 3
Query:   45 CHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRA--ETGLGCQSLPMAIYVVSRDEDGERGGAPVVCIDDAS*TLFCVF 596
            C+K++                F +DFSSRI I+YRKGFD I DSK TSDV WGCM+RSSQMLVAQAL+FH LGR WRKP QKP+  EY+ ILH+FGDSE   FSIHNLLQAGK+YGLAAGSWVGPYAMCR+W+ L    R   E   G  + PMA+YVVS DEDGERGGAPVVCID A+  L C F
Sbjct:  108 CYKLSSEELSNSSDCESGNAAFLEDFSSRIWITYRKGFDAISDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRKPSQKPYSPEYIGILHMFGDSEACAFSIHNLLQAGKSYGLAAGSWVGPYAMCRAWQTLVCTNREHHEAVDGNGNFPMALYVVSGDEDGERGGAPVVCIDVAA-QLCCDF 292          

HSP 2 Score: 24.6386 bits (52), Expect = 6.137e-62
Identity = 17/44 (38.64%), Postives = 18/44 (40.91%), Query Frame = 2
Query:  593 FQNVQLTGHQFFCLFPWFSDLRK*IPGSFPPVGWTFTVPQSLGI 724
            F   Q T      L P    L K  P   P +  T T PQSLGI
Sbjct:  292 FNKNQSTWSPILLLVPLVLGLDKLNPRYIPLLKETLTFPQSLGI 335          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4B_ARATH (Cysteine protease ATG4b OS=Arabidopsis thaliana GN=ATG4B PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 9.490e-60
Identity = 107/179 (59.78%), Postives = 133/179 (74.30%), Query Frame = 3
Query:   45 CHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSRDEDGERGGAPVVCIDDAS*T 581
            C+KI++               F QDFSS IL++YR+GF+PIGD+  TSDV WGCMLRS QML AQALLF RLGR WRK   +P D +Y+EIL LFGD+E S FSIHNL+ AG++YGLAAGSWVGPYA+CRSWE+LAR  + ET    +S  MA+++VS  EDGERGGAP++CI+D + T
Sbjct:  120 CYKISEGESSEEADAGRVLAAFRQDFSSLILMTYRRGFEPIGDTTYTSDVNWGCMLRSGQMLFAQALLFQRLGRSWRKKDSEPADEKYLEILELFGDTEASAFSIHNLILAGESYGLAAGSWVGPYAVCRSWESLARKNKEETDDKHKSFSMAVHIVSGSEDGERGGAPILCIEDVTKT 298          

HSP 2 Score: 28.4906 bits (62), Expect = 9.490e-60
Identity = 11/34 (32.35%), Postives = 17/34 (50.00%), Query Frame = 1
Query:  583 CSVFSKRPADWTPIXXXXXXXXXXEKVNPRVVPT 684
            C  FS+   +W PI          ++VNPR +P+
Sbjct:  299 CLEFSEGETEWPPILLLVPLVLGLDRVNPRYIPS 332          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_ARATH (Cysteine protease ATG4a OS=Arabidopsis thaliana GN=ATG4A PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 7.473e-58
Identity = 103/177 (58.19%), Postives = 130/177 (73.45%), Query Frame = 3
Query:   45 CHKIAQXXXXXXXXXXXXXXXFNQDFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALARCQRAETGLGCQSLPMAIYVVSRDEDGERGGAPVVCIDDAS 575
            C+KI+                   DFSS+IL++YRKGF+P  D+  TSDV WGCM+RSSQML AQALLFHRLGR W K  + P ++EY+E L  FGDSE S FSIHNL+ AG +YGLAAGSWVGPYA+CR+WE+LA  +R +T    Q+LPMA+++VS  EDGERGGAP++CI+DA+
Sbjct:  117 CYKISADENSGETDTGTVLAALQLDFSSKILMTYRKGFEPFRDTTYTSDVNWGCMIRSSQMLFAQALLFHRLGRAWTKKSELP-EQEYLETLEPFGDSEPSAFSIHNLIIAGASYGLAAGSWVGPYAICRAWESLACKKRKQTDSKNQTLPMAVHIVSGSEDGERGGAPILCIEDAT 292          

HSP 2 Score: 32.3426 bits (72), Expect = 7.473e-58
Identity = 13/36 (36.11%), Postives = 19/36 (52.78%), Query Frame = 1
Query:  577 RHCSVFSKRPADWTPIXXXXXXXXXXEKVNPRVVPT 684
            + C  FSK  ++WTPI          + VNPR +P+
Sbjct:  293 KSCLEFSKGQSEWTPIILLVPLVLGLDSVNPRYIPS 328          

HSP 3 Score: 22.3274 bits (46), Expect = 7.473e-58
Identity = 10/19 (52.63%), Postives = 12/19 (63.16%), Query Frame = 2
Query:  668 PGSFPPVGWTFTVPQSLGI 724
            P   P +  TFT PQS+GI
Sbjct:  323 PRYIPSLVATFTFPQSVGI 341          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_XENLA (Cysteine protease ATG4A OS=Xenopus laevis GN=atg4a PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20
Identity = 49/112 (43.75%), Postives = 64/112 (57.14%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D  SR+  +YRK F PIG +  +SD GWGCMLR  QM++AQAL+   LGR WR    K    EY +IL  F D +   +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   50 DIVSRLWFTYRKKFSPIGGTGPSSDTGWGCMLRCGQMMLAQALVCQHLGRDWRWEKHKNHPEEYQQILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLA 161          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_CHICK (Cysteine protease ATG4A OS=Gallus gallus GN=ATG4A PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20
Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D S+R+  +YR+ F PIG +  +SD GWGCMLR  QM++AQAL+   LGR W+    K    EY  ILH F D +   +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   31 DVSARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWQWEKHKKQPEEYHRILHCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLA 142          
BLAST of EY735845 vs. ExPASy Swiss-Prot
Match: ATG4A_BOVIN (Cysteine protease ATG4A OS=Bos taurus GN=ATG4A PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20
Identity = 48/112 (42.86%), Postives = 65/112 (58.04%), Query Frame = 3
Query:  117 DFSSRILISYRKGFDPIGDSKITSDVGWGCMLRSSQMLVAQALLFHRLGRPWRKPLQKPFDREYVEILHLFGDSETSPFSIHNLLQAGKAYGLAAGSWVGPYAMCRSWEALA 452
            D S+R+  +YR+ F PIG +  +SD GWGCMLR  QM++AQAL+   LGR W    QK   +EY  IL  F D +   +SIH + Q G   G + G W GP  + +  + LA
Sbjct:   48 DISARLWFTYRRKFSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQPKEYQRILQCFLDRKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLA 159          
The following BLAST results are available for this feature:
BLAST of EY735845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
ATG4_MEDTR5.705e-6971.59Cysteine protease ATG4 OS=Medicago truncatula GN=A... [more]
ATG4B_ORYSJ2.332e-6462.90Cysteine protease ATG4B OS=Oryza sativa subsp. jap... [more]
ATG4A_ORYSI5.170e-6464.52Cysteine protease ATG4A OS=Oryza sativa subsp. ind... [more]
ATG4B_ORYSI1.146e-6362.37Cysteine protease ATG4B OS=Oryza sativa subsp. ind... [more]
ATG4A_ORYSJ6.137e-6263.98Cysteine protease ATG4A OS=Oryza sativa subsp. jap... [more]
ATG4B_ARATH9.490e-6059.78Cysteine protease ATG4b OS=Arabidopsis thaliana GN... [more]
ATG4A_ARATH7.473e-5858.19Cysteine protease ATG4a OS=Arabidopsis thaliana GN... [more]
ATG4A_XENLA7.571e-2043.75Cysteine protease ATG4A OS=Xenopus laevis GN=atg4a... [more]
ATG4A_CHICK7.571e-2042.86Cysteine protease ATG4A OS=Gallus gallus GN=ATG4A ... [more]
ATG4A_BOVIN7.571e-2042.86Cysteine protease ATG4A OS=Bos taurus GN=ATG4A PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-G12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735845 ID=EY735845; Name=EY735845; organism=Citrus sinensis; type=EST; length=818bp
CACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGTCTTGGTGTGTGCCAT
AAAATTGCACAGGATGAGGCCTTGGGTGATGCAGCTGGTAACAATGGATT
AGCGGAATTCAATCAAGATTTTTCATCAAGAATTCTGATTTCATATCGTA
AAGGTTTTGATCCTATTGGTGATTCAAAGATTACAAGTGATGTAGGCTGG
GGTTGCATGCTTCGAAGTAGTCAGATGCTTGTTGCACAGGCATTGCTTTT
TCATCGATTGGGGAGACCTTGGAGAAAACCTTTGCAGAAGCCATTTGATC
GTGAATATGTTGAGATCTTGCACCTTTTTGGTGATTCTGAGACATCACCT
TTCTCCATTCACAATCTTCTTCAAGCTGGAAAGGCTTATGGCCTTGCAGC
TGGATCATGGGTTGGCCCATATGCCATGTGTCGCTCATGGGAAGCTCTAG
CTCGTTGTCAGAGAGCGGAAACTGGCCTTGGATGCCAGTCACTTCCAATG
GCTATTTATGTTGTTTCACGTGATGAAGATGGGGAGCGAGGTGGAGCTCC
AGTTGTGTGTATTGACGATGCATCCTAGACATTGTTCTGTGTTTTCAAAA
CGTCCAGCTGACTGGACACCAATTCTTCTGCTTGTTCCCTTGGTTCTCGG
ACTTGAGAAAGTAAATCCCAGGGTCGTTCCCACCCGTGGGGTGGACGTTC
ACCGTTCCCCAAAGCCTGGGCATCCGGGGGGGGGAACCCCCGCTCCCCCA
GCTCACTTTGGGGGGGGGCGGGAAAGAGCCGGGTATCGACGTTGAATGCC
ATGAGGTTAGGCGGGCTA
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