EY735841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY735841 vs. ExPASy Swiss-Prot
Match: HDT2_MAIZE (Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.087e-22 Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 3 Query: 420 TPKKAESSKKRPVESASKTYVPDKKAKFVTP--QKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTEXWFAISYKSQAR 710 TPKK E+ KKR E+A KT + DKKAK TP QKT KKG +H+ATPHP+K KTPANND+ ++ KSGGS PCKSC+++F +E A+ S+A+ Sbjct: 205 TPKKPEAGKKRGAENALKTPLSDKKAKVATPPAQKTGGKKGATHVATPHPAK--GKTPANNDKLTEKSPKSGGSVPCKSCSKTFNSE--MALQAHSKAK 299 HSP 2 Score: 24.2534 bits (51), Expect = 3.087e-22 Identity = 9/11 (81.82%), Postives = 11/11 (100.00%), Query Frame = 1 Query: 682 LQSHTKAKHGA 714 LQ+H+KAKHGA Sbjct: 292 LQAHSKAKHGA 302
BLAST of EY735841 vs. ExPASy Swiss-Prot
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.730e-20 Identity = 54/102 (52.94%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 420 TPKKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTEXWFAISYKSQARCSSMK 725 TPKKAE +K+R +SA+KT V DKKAK TPQKT+ KKG H+ATPHPSK+++KTP KS GS CK CNRSF +E A+ S+A+ S+ K Sbjct: 181 TPKKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTP-----------KSAGSHHCKPCNRSFGSEG--ALDSHSKAKHSAGK 269
BLAST of EY735841 vs. ExPASy Swiss-Prot
Match: HDT3_ARATH (Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.703e-19 Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = 3 Query: 420 TPKKAESSKKRPVE-SASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANND----QTKQQPHKSGGSFPCKSCNRSFTTE 674 TPKK E KKR E ++SK +KKAKFVTPQKT+ KK H+ATPHPSK++ K +QQ KS G+F CKSC R+FT+E Sbjct: 190 TPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKTDSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSE 279 HSP 2 Score: 28.1054 bits (61), Expect = 1.703e-19 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 679 GLQSHTKAKHGAPA 720 GLQSHTKAKH A A Sbjct: 281 GLQSHTKAKHSAAA 294
BLAST of EY735841 vs. ExPASy Swiss-Prot
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.733e-18 Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 3 Query: 426 KKAESSKKRPVESASKTYVPDKKAKFVTPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGGSFPCKSCNRSFTTE 674 KK + KKRP ESA+KT + KKAK TP+KT+ KK V H+ATPHPSKK KTP + TK Q S G C SC +SFT E Sbjct: 203 KKVDQGKKRPNESAAKTPISAKKAKTATPEKTDGKKSV-HVATPHPSKKGGKTP---NSTKGQTPNSAGQLSCASCKKSFTNE 281 HSP 2 Score: 23.8682 bits (50), Expect = 6.733e-18 Identity = 9/11 (81.82%), Postives = 9/11 (81.82%), Query Frame = 1 Query: 679 GLQSHTKAKHG 711 GLQ H KAKHG Sbjct: 283 GLQQHKKAKHG 293
BLAST of EY735841 vs. ExPASy Swiss-Prot
Match: HDT1_MAIZE (Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.349e-17 Identity = 55/113 (48.67%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 420 TPKKAESSKKRPVESAS-KTYVPDKKAKFVTP--QKTEEKKGVS-HIATPHPSKKSAKTPANNDQTKQQPH---KSGGSFPCKSCNRSFTTEXWFAISYKSQARCSSMKDGVE 737 TPKK E KKRP ES+ KT + DKKAK TP QKT KKG + H+ATPHP+K KT NND++ + P KSGGS PCK C++SF +E A+ S+A+ + + V+ Sbjct: 199 TPKKPEVGKKRPAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVKSPKSAPKSGGSVPCKPCSKSFISET--ALQAHSRAKMGASESQVQ 307
BLAST of EY735841 vs. ExPASy Swiss-Prot
Match: HDT3_MAIZE (Histone deacetylase HDT3 OS=Zea mays GN=HDT3 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.097e-13 Identity = 47/90 (52.22%), Postives = 59/90 (65.56%), Query Frame = 3 Query: 420 TPKKAESSKKRPVESAS-KTYVPDKKAKFVTP--QKTEEKKGVS-HIATPHPSKKSAKTPANNDQTKQQPHKSGGS-FPCKSCNRSFTTE 674 TPKK E KKR ES+ KT + DKKAK TP QKT KKG + H+ATPHP+K KT NND++ + P + S PCKSC++SF +E Sbjct: 199 TPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGKKGAAVHVATPHPAK--GKTIVNNDKSVKSPKSAPKSGVPCKSCSKSFISE 286 HSP 2 Score: 21.1718 bits (43), Expect = 1.097e-13 Identity = 7/9 (77.78%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 685 QSHTKAKHG 711 Q+H+KAKHG Sbjct: 290 QAHSKAKHG 298
BLAST of EY735841 vs. ExPASy Swiss-Prot
Match: HDT2_ARATH (Histone deacetylase HDT2 OS=Arabidopsis thaliana GN=HDT2 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12 Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 420 TPKKAES-SKKRPVESASKTYVPDKKAKFV-----TPQKTEEKKGVSHIATPHPSKKSAKTPANNDQTKQQPHKSGG 632 TPKK E +KKRP ES SKT V KKAK TPQKTEEKK H ATPHP+KK K+P N +Q+ + +S G Sbjct: 199 TPKKPEPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSSG 275 The following BLAST results are available for this feature:
BLAST of EY735841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735841 ID=EY735841; Name=EY735841; organism=Citrus sinensis; type=EST; length=854bpback to top |