EY735830

Overview
NameEY735830
Unique NameEY735830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735830_ssr258 microsatellite EY735830_ssr258:258..269. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.018e-40
Identity = 93/190 (48.95%), Postives = 125/190 (65.79%), Query Frame = 1
Query:  166 SETFDHFHEDKTSTKRKQIYGR------------EFQAMMDCLEEEDCREE-------ASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQEN----EETSHAVEAEAPVSEQSKNHV 666
            S++   F   + ST  KQI  R            ++  M D LE++   E+       +S A EKKRRL V+QVKALEKNFE+DNKLEP+RKVKLA+ELGLQPRQ+A+WFQNRRAR K+K+LERDYG+LK+N+DAL+ + ++LQ++N++L  +++ELKAKL  E     EE       EA  S  + N V
Sbjct:    8 SDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKGIEENGALKAVEANQSVMANNEV 197          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.197e-39
Identity = 98/208 (47.12%), Postives = 134/208 (64.42%), Query Frame = 1
Query:   49 MKRFSSSDSFDALITVYKSAGKHNSTTDLS*S*VFLFMGSETFDHFHEDKTSTKRKQIYGREFQAMMDCLEEED--CREEASQA--TEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLC-----QENEETSHAVEAEAPVS 645
            MKR SSSDS   LI++  +                             D+ S +R    GREFQ+M++  EEE+    EE      +EKKRRL+++QVKALEKNFE++NKLEP+RKVKLA+ELGLQPRQ+AVWFQNRRAR K+K+LE+DYG+LK  YD+LR + ++L+++NE+L  E+ +LK KL      +E EE + AV  E+ +S
Sbjct:    2 MKRLSSSDSVGGLISLCPTTST--------------------------DEQSPRRYG--GREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESDIS 181          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 8.030e-36
Identity = 75/150 (50.00%), Postives = 107/150 (71.33%), Query Frame = 1
Query:  223 YGREFQAMMD-------CLEEEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQ 651
            YG  +Q+M++        +EE          +EKKRRL VDQVKALEKNFE++NKLEP+RK KLA+ELGLQPRQ+AVWFQNRRAR K+K+LE+DYG+LK  YD+LR + ++L+++N++L  E+ ++KAK+  E +  ++    E    E+
Sbjct:   26 YGSNYQSMLEGYDEDATLIEEYSGNHHHMGLSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEGVKEEE 175          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.985e-35
Identity = 71/116 (61.21%), Postives = 94/116 (81.03%), Query Frame = 1
Query:  298 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVS 645
            EKKRRL+V+QV+ALE++FEV+NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY  L+ +YD+LRLDH+ L+++ +AL AE++ELKAKL  E    S     E P +
Sbjct:   50 EKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAA 165          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.985e-35
Identity = 71/116 (61.21%), Postives = 94/116 (81.03%), Query Frame = 1
Query:  298 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVS 645
            EKKRRL+V+QV+ALE++FEV+NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY  L+ +YD+LRLDH+ L+++ +AL AE++ELKAKL  E    S     E P +
Sbjct:   50 EKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEEAAASFTSVKEEPAA 165          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.516e-34
Identity = 73/147 (49.66%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  271 CREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQEN----------EETSHAVEAEAPVSEQSKNHVSSENA 681
            C        EKKRRL+V+QV+ALE++FE +NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY  L+ +YDALR DH+ L+++ +AL AE++ELK KL  E+          EE   A +A+ P +   +    S+++
Sbjct:   33 CGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDADPPATGAPQGSSESDSS 179          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.516e-34
Identity = 73/147 (49.66%), Postives = 102/147 (69.39%), Query Frame = 1
Query:  271 CREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQEN----------EETSHAVEAEAPVSEQSKNHVSSENA 681
            C        EKKRRL+V+QV+ALE++FE +NKLEP+RK +LA +LGLQPRQ+AVWFQNRRAR K+K+LERDY  L+ +YDALR DH+ L+++ +AL AE++ELK KL  E+          EE   A +A+ P +   +    S+++
Sbjct:   33 CGGRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDADPPATGAPQGSSESDSS 179          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.418e-32
Identity = 65/113 (57.52%), Postives = 93/113 (82.30%), Query Frame = 1
Query:  298 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQENEETSHAVEAEA 636
            EKKRRL ++QV+ALE++F+ DNKL+PDRK ++A +LGLQPRQ+AVWFQNRRAR K+K+LERD+  L+A +DALR D + L+++ +AL AE+REL+ KL  +  +T+ +V+ EA
Sbjct:   71 EKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIRELREKLPTKPADTAASVKVEA 183          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 5.386e-32
Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 1
Query:  262 EEDCREEASQATEKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANYDALRLDHNNLQQENEALTAELRELKAKLCQENEETSHAVEAEAPVSEQSKNHVSSEN 678
            EED  ++ SQ  EKKRRL ++QVK LEKNFE+ NKLEP+RK++LA  LGLQPRQIA+WFQNRRAR K+K+LE+DY  LK  +D L+ +++ LQ  N+ L AE+  LK +  ++ E  +   E E   S +S N  SS+N
Sbjct:   72 EEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNR--EQTESINLNKETEGSCSNRSDN--SSDN 206          
BLAST of EY735830 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.955e-31
Identity = 65/114 (57.02%), Postives = 93/114 (81.58%), Query Frame = 1
Query:  298 EKKRRLTVDQVKALEKNFEVDNKLEPDRKVKLAEELGLQPRQIAVWFQNRRARLKSKELERDYGLLKANY-DALRLDHNNLQQENEALTAELRELKAKLCQENEETSHAVEAEA 636
            EKKRRL ++QV+ALE++F+ DNKL+PDRK ++A +LGLQPRQ+AVWFQNRRAR K+K+LERD+  L+A + DALR D + L+++ +AL AE+REL+ KL  +  +T+ +V+ EA
Sbjct:   71 EKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRAQHNDALRADCDALRRDKDALAAEIRELREKLPTKPADTAASVKVEA 184          
The following BLAST results are available for this feature:
BLAST of EY735830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
ATHB5_ARATH7.018e-4048.95Homeobox-leucine zipper protein ATHB-5 OS=Arabidop... [more]
ATHB6_ARATH1.197e-3947.12Homeobox-leucine zipper protein ATHB-6 OS=Arabidop... [more]
ATB16_ARATH8.030e-3650.00Homeobox-leucine zipper protein ATHB-16 OS=Arabido... [more]
HOX4_ORYSJ3.985e-3561.21Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX4_ORYSI3.985e-3561.21Homeobox-leucine zipper protein HOX4 OS=Oryza sati... [more]
HOX20_ORYSJ7.516e-3449.66Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
HOX20_ORYSI7.516e-3449.66Homeobox-leucine zipper protein HOX20 OS=Oryza sat... [more]
HOX13_ORYSJ2.418e-3257.52Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
ATB13_ARATH5.386e-3252.52Homeobox-leucine zipper protein ATHB-13 OS=Arabido... [more]
HOX13_ORYSI5.955e-3157.02Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-F03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735830 ID=EY735830; Name=EY735830; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTTAGCTTTAAGCAT
GAAGCGTTTCAGCTCTTCAGATTCCTTTGATGCTCTGATCACTGTCTATA
AATCTGCAGGTAAGCACAATTCAACTACAGATTTATCCTGAAGTTAAGTA
TTTTTGTTTATGGGTTCTGAGACTTTTGATCATTTTCATGAAGACAAGAC
GAGTACAAAGAGAAAGCAAATTTACGGTAGAGAGTTTCAGGCCATGATGG
ATTGCTTAGAAGAAGAAGACTGCAGAGAGGAAGCTAGCCAAGCTACAGAA
AAGAAGCGTCGATTAACTGTGGATCAAGTTAAGGCCTTGGAGAAGAATTT
TGAGGTCGATAACAAGCTAGAGCCTGATAGGAAAGTTAAATTAGCTGAAG
AATTGGGACTGCAACCGCGACAAATTGCTGTTTGGTTCCAAAACCGGCGC
GCTCGTTTGAAGAGCAAAGAATTGGAGAGAGACTATGGCCTTCTCAAAGC
TAACTATGATGCTTTAAGGCTTGACCACAATAATCTTCAACAAGAAAATG
AAGCCCTTACTGCTGAGTTAAGGGAATTGAAAGCTAAGCTTTGCCAAGAA
AATGAAGAGACTAGTCATGCTGTTGAGGCAGAGGCCCCTGTTTCCGAACA
GAGCAAAAACCACGTTTCAAGTGAAAATGCAAATGCTCAGCTATTGACAT
CCCCACCTTCTTTTTCTTCTCTTTTCACTGGCTCTTCTTCCTCTTCGCAT
CCATCAATGAACTGGGGTCATTTTTCTGATTCCAGAACAATATTGAGTAA
TGTCTATCAGCAGCCTCCCCTTGTGAAAGTTGAAAAAGCAAGCCTGTTGT
TTAT
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