EY735821

Overview
NameEY735821
Unique NameEY735821
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12316 contig Csv1_Contig12316:1..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_AQUAE (ATP-dependent DNA helicase recG OS=Aquifex aeolicus GN=recG PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.216e-49
Identity = 115/277 (41.52%), Postives = 162/277 (58.48%), Query Frame = 2
Query:   26 KEGLLDKYRKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEKGYENVYKMMLDELXSGGK 856
            K+  + K + P++N           +K +  LP+ LT +Q  AI EI+ DL + VPMNRLLQGDVG GKT+VA L  + V+ SGYQ A MVPTE+LA QHY+   ++L +     +   +ALLTGS    Q + + K ++ G+I +++GTH+LI +KVEF  L   I+DEQ RFGV+QR     K                      + + PH L MSATPIPRTLAL++YGD+ ++ I +LPP R  + T +   ++K  E VYK + +EL  G K
Sbjct:  331 KKQEIKKEKAPKVNVD-----EKFLRKAIEKLPFKLTRAQERAIKEILEDLSRDVPMNRLLQGDVGSGKTIVAILTSLAVVKSGYQVAVMVPTEILAHQHYKKFSEMLKD-----YGVNVALLTGSLTPSQKKSVYKHVKEGNIHVLVGTHALIQDKVEFKNLGYVIIDEQHRFGVMQRKLLLEK---------------------GKGLYPHCLVMSATPIPRTLALSIYGDLDISIIDELPPGRKEVITKLYFESQK--EEVYKKVEEELKKGNK 574          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_SYNY3 (ATP-dependent DNA helicase recG OS=Synechocystis sp. (strain PCC 6803) GN=recG PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.450e-48
Identity = 111/267 (41.57%), Postives = 154/267 (57.68%), Query Frame = 2
Query:   50 RKPRLNAAYMEGWSSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEKGYENVYKMMLDELXSG 850
            +K +  +A       L +K    LP+ LT +Q   ++EI+ DL +P PMNRL+QGDVG GKTVV   A +  +  GYQAA M PTE+LA QHY+ L+   + +    + P + LLTGST   + R I   L TG + L++GTH+LI E V F  L L ++DEQ RFGV QR +  +K                         APHVL+M+ATPIPRTLAL L+GD+ ++QI +LPP R PI T +I   E+    +Y+++  E+  G
Sbjct:  379 QKQQQQSAIFTPHGELLEKFSDLLPFRLTQAQQRVVNEILQDLNKPSPMNRLVQGDVGSGKTVVGVFAILAALQGGYQAALMAPTEVLAEQHYQKLVSWFNLL----YLP-VELLTGSTKTAKRREIHAQLSTGQLPLLVGTHALIQETVNFQRLGLVVIDEQHRFGVQQRAKLLAK-----------------------GNAPHVLSMTATPIPRTLALTLHGDLEVSQIDELPPGRQPIHTSVITAKER--PQMYELIRREVAQG 615          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_TREPA (ATP-dependent DNA helicase recG OS=Treponema pallidum GN=recG PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.376e-45
Identity = 105/254 (41.34%), Postives = 151/254 (59.45%), Query Frame = 2
Query:   89 SSLTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEKGYENVYKMMLDELXSG 850
            S L KKL R LP+ LT  Q   I+EI  DL++  PM RL+QGDVG GKT+VAF +C+++I  G Q A + PTELLA QH +   +LL  +       ++A LTG+   +    + + L  G+I LV+GTH+L ++ V +  LRL I+DEQ RFGV+QR             S +     +G+P   Q   PH++ MSATPIPRTLAL+++GD+ ++ I  +P  R P+ TYI    +   E VY+ + +E+  G
Sbjct:  257 SLLQKKLHRCLPFELTVDQKRVITEITQDLEREEPMARLIQGDVGSGKTLVAFFSCLKIIEQGGQVALLAPTELLARQHADTAARLLAPI-----GIRLAFLTGNVKSEGRAYLLEALVAGEINLVVGTHALFSKSVRYHDLRLVIIDEQHRFGVLQR-------------SALIQKGREGNP---QGKTPHIIMMSATPIPRTLALSVFGDLDISIIKSMPGGRKPVITYIARKTKA--EKVYEFVGNEIEKG 487          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_BORBU (ATP-dependent DNA helicase recG OS=Borrelia burgdorferi GN=recG PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.016e-43
Identity = 104/253 (41.11%), Postives = 142/253 (56.13%), Query Frame = 2
Query:   95 LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYII-EGNEKGYENVYKMMLDELXSG 850
            L +K++ +LP+ LT  Q  +I EI +DL    PMNRLLQGDVG GKT+VA L+ + +I +GYQ AFM PT+LLA QHY++L  +L           + LLTGS   K      + ++ G   L++GTH++  E  EF  L   I+DEQ +FGVVQR    +K        G+ M                 L MSATPIPR+ AL L+GD+ ++ I  LP  R+PI TY+   GNE   + VY+ +  EL  G
Sbjct:  251 LLEKVVSSLPFELTEDQKISIDEIFFDLNSSKPMNRLLQGDVGSGKTLVALLSGLPLIEAGYQVAFMAPTDLLARQHYDNLSNIL-----APFNISMTLLTGSLRKKDKEQALESIRNGTSGLIVGTHAIFYESTEFKRLAYVIIDEQHKFGVVQREELKNK------GEGVDM-----------------LLMSATPIPRSFALTLFGDLEVSFIKTLPKGRLPITTYLARHGNE---DKVYEFLRKELLKG 472          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_STAES (ATP-dependent DNA helicase recG OS=Staphylococcus epidermidis (strain ATCC 12228) GN=recG PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.426e-42
Identity = 106/250 (42.40%), Postives = 146/250 (58.40%), Query Frame = 2
Query:  101 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEKGYENVYKMMLDELXSG 850
            K+ + +LP+ LT +Q  +++EI  DLK P+ M+RLLQGDVG GKTVVA +    +  +GYQ+A MVPTE+LA QH E L++L  N         +ALLTGS   K+ R++ + L+ G I  +IGTH+LI + V F+ + L I DEQ RFGV QR     K          AM N              VL M+ATPIPRTLA++++G+M ++ I  LP  R PIKT   +  +  Y+ V   M +EL  G
Sbjct:  251 KQFIDSLPFELTDAQKVSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLIQLFGN------TMNVALLTGSVKGKKRRLLLEQLENGTIDCLIGTHALIQDDVVFNNVGLVITDEQHRFGVNQRQILREK---------GAMTN--------------VLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIKTSWAKHEQ--YDQVLAQMSNELKKG 469          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_STAEQ (ATP-dependent DNA helicase recG OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=recG PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.475e-42
Identity = 105/250 (42.00%), Postives = 146/250 (58.40%), Query Frame = 2
Query:  101 KKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEKGYENVYKMMLDELXSG 850
            K+ + +LP+ LT +Q  +++EI  DLK P+ M+RLLQGDVG GKT+VA +    +  +GYQ+A MVPTE+LA QH E L++L  N         +ALLTGS   K+ R++ + L+ G I  +IGTH+LI + V F+ + L I DEQ RFGV QR     K          AM N              VL M+ATPIPRTLA++++G+M ++ I  LP  R PIKT   +  +  Y+ V   M +EL  G
Sbjct:  251 KQFIDSLPFELTDAQKVSVNEIFRDLKAPIRMHRLLQGDVGSGKTIVAAICMYALKTAGYQSALMVPTEILAEQHAESLMQLFGN------TMNVALLTGSVKGKKRRLLLEQLENGTIDCLIGTHALIQDDVVFNNVGLVITDEQHRFGVNQRQILREK---------GAMTN--------------VLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIKTSWAKHEQ--YDQVLAQMSNELKKG 469          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_MYCTU (ATP-dependent DNA helicase recG OS=Mycobacterium tuberculosis GN=recG PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 96/265 (36.23%), Postives = 150/265 (56.60%), Query Frame = 2
Query:   86 WSS--LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL------DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEK--GYENVYKMMLDELXSG 850
            W S  L  +LLR LP+ LT+ Q   +  +   L    P+NRLLQG+VG GKT+VA LA ++++ +GYQ A + PTE+LA QH   +  +L        +   ++  ++ALLTGS    Q + +R ++ +G + +VIGTH+L+ E V+F  L + +VDEQ RFGV QR +  +K                        + PH+L M+ATPIPRT+AL +YGD+  + + +LP  R PI T +I   +K    +  ++ +++E  +G
Sbjct:  271 WKSNGLAAELLRRLPFELTAGQREVLDVLSDGLAANRPLNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGIVIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAKA--------------------PAGITPHLLVMTATPIPRTVALTVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAG 515          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_MYCBO (ATP-dependent DNA helicase recG OS=Mycobacterium bovis GN=recG PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 96/265 (36.23%), Postives = 150/265 (56.60%), Query Frame = 2
Query:   86 WSS--LTKKLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLL------DNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIEGNEK--GYENVYKMMLDELXSG 850
            W S  L  +LLR LP+ LT+ Q   +  +   L    P+NRLLQG+VG GKT+VA LA ++++ +GYQ A + PTE+LA QH   +  +L        +   ++  ++ALLTGS    Q + +R ++ +G + +VIGTH+L+ E V+F  L + +VDEQ RFGV QR +  +K                        + PH+L M+ATPIPRT+AL +YGD+  + + +LP  R PI T +I   +K    +  ++ +++E  +G
Sbjct:  271 WKSNGLAAELLRRLPFELTAGQREVLDVLSDGLAANRPLNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGIVIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAKA--------------------PAGITPHLLVMTATPIPRTVALTVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAG 515          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_STRPN (ATP-dependent DNA helicase recG OS=Streptococcus pneumoniae GN=recG PE=3 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.947e-41
Identity = 99/221 (44.80%), Postives = 130/221 (58.82%), Query Frame = 2
Query:  116 ALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKT 778
            +LP++LT +Q  ++ EI+ D+K    MNRLLQGDVG GKTVVA LA    + +GYQAA MVPTE+LA QH+E L  L  N+       K+ALLTGS    + R + + +  G+  L+IGTH+LI + VE++ L L I+DEQ RFGV QR     K               D          P VL M+ATPIPRTLA+  +GDM ++ I  +P  R PI T
Sbjct:  248 SLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKTVVAGLAMFAAVTAGYQAALMVPTEILAEQHFESLQNLFPNL-------KLALLTGSLKAAEKREVLETIAKGEADLIIGTHALIQDGVEYARLGLIIIDEQHRFGVGQRRILREK--------------GDN---------PDVLMMTATPIPRTLAITAFGDMDVSIIDQMPAGRKPIVT 438          
BLAST of EY735821 vs. ExPASy Swiss-Prot
Match: RECG_BACSU (ATP-dependent DNA helicase recG OS=Bacillus subtilis GN=recG PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.102e-40
Identity = 95/229 (41.48%), Postives = 135/229 (58.95%), Query Frame = 2
Query:  104 KLLRALPYSLTSSQLSAISEIIWDLKQPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLATQHYEHLLKLLDNMEEDKHKPKIALLTGSTPVKQSRMIRKDLQTGDITLVIGTHSLIAEKVEFSALRLAIVDEQQRFGVVQRGRFNSKLYYTSMSSGMAMVNSDGSPKDDQHMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPRRIPIKTYIIE 790
            + +++LP+ LT++Q   + EI  D+  P  MNRLLQGDVG GKT VA +A    I SGYQ A MVPTE+LA QH + L+ L      +K    +ALLT S   K+ + + + L  G+I +++GTH+LI ++VEF AL L I DEQ RFGV QR +  +K                          P VL M+ATPIPRTLA+ ++G+M ++ I ++P  R  I+TY ++
Sbjct:  248 RFIKSLPFPLTNAQSRVLREITADMSSPYRMNRLLQGDVGSGKTAVAAIALYAAILSGYQGALMVPTEILAEQHADSLVSLF-----EKWDVSVALLTSSVKGKRRKELLERLAAGEIDILVGTHALIQDEVEFKALSLVITDEQHRFGVEQRKKLRNK-----------------------GQDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVK 448          
The following BLAST results are available for this feature:
BLAST of EY735821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
RECG_AQUAE2.216e-4941.52ATP-dependent DNA helicase recG OS=Aquifex aeolicu... [more]
RECG_SYNY32.450e-4841.57ATP-dependent DNA helicase recG OS=Synechocystis s... [more]
RECG_TREPA7.376e-4541.34ATP-dependent DNA helicase recG OS=Treponema palli... [more]
RECG_BORBU9.016e-4341.11ATP-dependent DNA helicase recG OS=Borrelia burgdo... [more]
RECG_STAES3.426e-4242.40ATP-dependent DNA helicase recG OS=Staphylococcus ... [more]
RECG_STAEQ4.475e-4242.00ATP-dependent DNA helicase recG OS=Staphylococcus ... [more]
RECG_MYCTU2.221e-4136.23ATP-dependent DNA helicase recG OS=Mycobacterium t... [more]
RECG_MYCBO2.221e-4136.23ATP-dependent DNA helicase recG OS=Mycobacterium b... [more]
RECG_STRPN4.947e-4144.80ATP-dependent DNA helicase recG OS=Streptococcus p... [more]
RECG_BACSU1.102e-4041.48ATP-dependent DNA helicase recG OS=Bacillus subtil... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-E05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735821 ID=EY735821; Name=EY735821; organism=Citrus sinensis; type=EST; length=864bp
CACGCGTCCGGGTACACAATTTGAGAAAGAGGGATTGCTGGATAAGTACA
GAAAACCTAGATTAAATGCTGCATATATGGAGGGATGGTCCAGTCTGACC
AAGAAACTTTTAAGAGCTCTTCCTTATTCCCTTACGTCTAGTCAGCTAAG
TGCCATTTCAGAAATTATATGGGATCTCAAGCAACCAGTTCCTATGAATC
GGCTTTTGCAGGGTGATGTTGGATGTGGTAAAACTGTGGTAGCTTTTTTG
GCTTGCATGGAGGTTATAGGCTCTGGTTATCAGGCAGCTTTTATGGTTCC
AACTGAGTTGCTTGCAACCCAGCACTATGAGCACTTGCTTAAATTGCTAG
ATAATATGGAGGAGGACAAGCACAAACCTAAAATTGCCTTACTAACAGGT
TCAACACCAGTAAAACAATCCCGGATGATCCGTAAGGATCTTCAAACTGG
AGATATCACTCTGGTCATTGGAACCCATAGTTTAATTGCTGAAAAAGTTG
AATTTTCTGCTTTACGCCTCGCTATTGTGGATGAACAACAACGCTTTGGT
GTGGTACAGAGAGGCAGATTTAACAGTAAGTTATATTATACCTCCATGAG
TTCAGGTATGGCAATGGTTAATTCAGACGGGTCTCCAAAAGATGATCAAC
ATATGGCTCCTCATGTTCTTGCCATGTCAGCCACTCCTATCCCAAGAACG
CTTGCTTTGGCATTATATGGGGATATGTCCCTTACACAGATAACTGACTT
ACCTCCCAGAAGGATACCTATTAAGACCTACATCATTGAAGGAAATGAGA
AGGGCTATGAGAATGTGTACAAGATGATGCTTGACGAACTGNCATCAGGT
GGAAAATGTCCCTT
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