EY735804

Overview
NameEY735804
Unique NameEY735804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig423 contig Csv1_Contig423:15..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA_SOYBN (40S ribosomal protein SA OS=Glycine max PE=2 SV=1)

HSP 1 Score: 405.216 bits (1040), Expect = 4.885e-115
Identity = 199/214 (92.99%), Postives = 205/214 (95.79%), Query Frame = 1
Query:   67 MATGT---ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREP 699
            MAT T   A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYREP
Sbjct:    1 MATATNAAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREP 214          

HSP 2 Score: 31.5722 bits (70), Expect = 4.885e-115
Identity = 18/51 (35.29%), Postives = 24/51 (47.06%), Query Frame = 3
Query:  711 QAEEEKTAAIDYATAELHTNLTSGD-QWPSQIADGGVGRVVKFKXPFPGVP 860
            Q EEE+  A+DYA  + +    + D QWP  I       V +   P P VP
Sbjct:  219 QQEEEEAPAVDYAITDFNAGAIAADGQWPGTIDQSWSDAVPQ---PIPAVP 266          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA_CICAR (40S ribosomal protein SA OS=Cicer arietinum GN=RAP40 PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 1.201e-110
Identity = 190/208 (91.35%), Postives = 200/208 (96.15%), Query Frame = 1
Query:   79 TATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREP 699
            T TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN  DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPG KWDVMVDLFFYREP
Sbjct:    3 TTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDKLNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREP 210          

HSP 2 Score: 30.8018 bits (68), Expect = 1.201e-110
Identity = 21/59 (35.59%), Postives = 30/59 (50.85%), Query Frame = 3
Query:  711 QAEEEKTAAIDYATAELHTN-LTSGDQWPSQIADGGVGRVVKFKXPFPGVPYFPEAAQQ 884
            Q EE++ AA DYA A+ + + + S  QWP+ I       V +   P P VP    AA +
Sbjct:  215 QPEEDEVAAPDYAIADFNVSAIPSDGQWPAAIDQPWNDAVPQ---PIPAVPAVNWAAPE 270          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA_VITVI (40S ribosomal protein SA OS=Vitis vinifera GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 1.195e-109
Identity = 193/206 (93.69%), Postives = 198/206 (96.12%), Query Frame = 1
Query:   82 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREP 699
            AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI PGHKWDVMVDLFFYREP
Sbjct:    2 ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRRTIAPGHKWDVMVDLFFYREP 207          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA_DAUCA (40S ribosomal protein SA OS=Daucus carota GN=179B PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 2.492e-107
Identity = 188/209 (89.95%), Postives = 196/209 (93.78%), Query Frame = 1
Query:   82 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPXRT 708
            A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENP DIIVQSARPYGQRAVLKFA+YT AHAIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+VMVDLFFYREP  T
Sbjct:    2 ASGARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMVDLFFYREPEET 210          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA1_ARATH (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana GN=RPSaA PE=1 SV=3)

HSP 1 Score: 386.726 bits (992), Expect = 9.471e-107
Identity = 188/214 (87.85%), Postives = 198/214 (92.52%), Query Frame = 1
Query:   67 MATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPXRT 708
            MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT A+AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI  G KWDVMVDLFFYREP  T
Sbjct:    1 MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFYREPEET 214          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA_BRANA (40S ribosomal protein SA OS=Brassica napus GN=LRP PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 4.701e-106
Identity = 187/209 (89.47%), Postives = 194/209 (92.82%), Query Frame = 1
Query:   82 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPXRT 708
            A    QLSQKEADI+MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT A+AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP  KWDVMVDLFFYREP  T
Sbjct:    3 ANGSTQLSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMVDLFFYREPEET 211          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA2_ARATH (40S ribosomal protein Sa-2 OS=Arabidopsis thaliana GN=RPSaB PE=1 SV=2)

HSP 1 Score: 383.645 bits (984), Expect = 8.018e-106
Identity = 186/210 (88.57%), Postives = 198/210 (94.29%), Query Frame = 1
Query:   70 ATGTATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREP 699
            A G ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP DIIVQSARPYGQRAVLKFA+YT  +AIAGRHTPGTFTNQMQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI    KWDVMVDLFFYREP
Sbjct:    3 ANGVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFYREP 212          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA_OSTTA (40S ribosomal protein SA OS=Ostreococcus tauri GN=Ot03g03270 PE=3 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 8.336e-87
Identity = 154/201 (76.62%), Postives = 174/201 (86.57%), Query Frame = 1
Query:   97 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREP 699
            Q+SQKEADI MMLAA  HLGTKN DFQMERYV+KRR DGI+IINLGKTW+KL +AARVIVA+ENP D+I Q+ARPYGQRAVLKFA+YT A A+AGRHTPGT+TNQ    F EPR+L++TDPRTD QPI E A  NIPTIAFCDTDSP++ VDI IPANNK K SIGCL++LLARMVLQMRGTI P + WDVMVDLFFYR+P
Sbjct:    4 QMSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVAVENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLARMVLQMRGTISPANPWDVMVDLFFYRDP 204          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA_OSTLU (40S ribosomal protein SA OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_12355 PE=3 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.572e-85
Identity = 151/201 (75.12%), Postives = 173/201 (86.07%), Query Frame = 1
Query:   97 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREP 699
            Q+SQKEADI MMLAA  HLGTKN DFQMERYV+KRR DGI+IINLG+TW+KL +AAR+IVA ENP D+I Q+ARPYGQRAVLKFA+YT A AIAGRHTPGT+TNQ    F EPR+LI+TDPRTD QPI E A  N+PTIAFCDTDSP++ VD+ IPANNK KHSIGCL++LLARMVLQMRGT+   + WDVMVDLFFYR+P
Sbjct:    4 QMSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGRTWDKLMLAARIIVACENPQDVICQAARPYGQRAVLKFAQYTGAKAIAGRHTPGTYTNQKDAIFAEPRVLIVTDPRTDAQPISETAYVNLPTIAFCDTDSPLKNVDVAIPANNKAKHSIGCLYYLLARMVLQMRGTVSAANPWDVMVDLFFYRDP 204          
BLAST of EY735804 vs. ExPASy Swiss-Prot
Match: RSSA_CHLRE (40S ribosomal protein SA OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_126059 PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 5.057e-84
Identity = 150/200 (75.00%), Postives = 172/200 (86.00%), Query Frame = 1
Query:  100 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREP 699
            LSQKE DIQMMLAA+ HLGTKNC +QMERY+++RR DGIYIINL KT+EKLQMAAR+IVAIENP DI V SARPYGQRAV KFA+Y    ++AGRHTPGTFTNQ+Q +F EPRLLILTDPRTDHQP+KE++  NIPTIAFCDTDSP+ +VD+ IPANNKGKHSIG L++LLARMVL+MR  I   + W V VDLFFYREP
Sbjct:    3 LSQKEQDIQMMLAAQCHLGTKNCHYQMERYMYRRRQDGIYIINLEKTYEKLQMAARIIVAIENPQDICVLSARPYGQRAVFKFAQYLGCKSMAGRHTPGTFTNQIQKAFEEPRLLILTDPRTDHQPVKESSYMNIPTIAFCDTDSPLTHVDVAIPANNKGKHSIGVLYFLLARMVLEMRDQINVTNPWSVPVDLFFYREP 202          
The following BLAST results are available for this feature:
BLAST of EY735804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_SOYBN4.885e-11592.9940S ribosomal protein SA OS=Glycine max PE=2 SV=1[more]
RSSA_CICAR1.201e-11091.3540S ribosomal protein SA OS=Cicer arietinum GN=RAP... [more]
RSSA_VITVI1.195e-10993.6940S ribosomal protein SA OS=Vitis vinifera GN=GSVI... [more]
RSSA_DAUCA2.492e-10789.9540S ribosomal protein SA OS=Daucus carota GN=179B ... [more]
RSSA1_ARATH9.471e-10787.8540S ribosomal protein Sa-1 OS=Arabidopsis thaliana... [more]
RSSA_BRANA4.701e-10689.4740S ribosomal protein SA OS=Brassica napus GN=LRP ... [more]
RSSA2_ARATH8.018e-10688.5740S ribosomal protein Sa-2 OS=Arabidopsis thaliana... [more]
RSSA_OSTTA8.336e-8776.6240S ribosomal protein SA OS=Ostreococcus tauri GN=... [more]
RSSA_OSTLU1.572e-8575.1240S ribosomal protein SA OS=Ostreococcus lucimarin... [more]
RSSA_CHLRE5.057e-8475.0040S ribosomal protein SA OS=Chlamydomonas reinhard... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-005-C09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735804 ID=EY735804; Name=EY735804; organism=Citrus sinensis; type=EST; length=899bp
CACGCGTCCGCGGACGCGTGGGCGGACGCGTGGGCAGCTTTCTCTCGCAG
GTTTTAAGAAATAAAGATGGCGACCGGAACAGCAACGGCCCCGAGGCAGC
TCTCTCAGAAAGAGGCTGACATTCAGATGATGTTAGCCGCCGAAGTTCAT
TTGGGTACTAAGAACTGTGACTTCCAAATGGAACGTTACGTGTTCAAGCG
CCGAAACGATGGAATTTATATTATCAATCTTGGTAAGACTTGGGAGAAGC
TACAGATGGCGGCCAGGGTTATCGTAGCCATTGAAAACCCTGGGGACATT
ATTGTCCAATCAGCTAGACCCTATGGACAGCGAGCTGTGTTGAAGTTTGC
AAAGTACACTCACGCCCATGCCATTGCTGGCAGGCACACTCCTGGTACAT
TTACCAATCAAATGCAAACATCATTCAATGAGCCCCGACTTCTCATTCTA
ACAGATCCACGAACAGACCATCAGCCAATTAAGGAAGCTGCCCTTGGAAA
CATTCCCACCATTGCCTTTTGTGACACTGACTCACCTATGCGTTATGTTG
ATATTGGCATTCCTGCCAATAACAAGGGCAAACACAGCATTGGGTGTCTC
TTCTGGCTTTTGGCTAGAATGGTTCTCCAGATGCGCGGCACTATTCGTCC
TGGCCACAAGTGGGATGTGATGGTCGATCTGTTCTTCTACAGGGAGCCAN
NAAGAACANGCAGGCTGAAGAAGAAAAAACTGCTGCTATTGATTATGCTA
CAGCAGAGTTACACACGAATCTTACCAGTGGTGATCAATGGCCTTCCCAA
ATTGCTGATGGTGGGGTGGGCCGGGTGGTAAAATTCAAAANCCCATTCCC
TGGTGTTCCCTATTTCCCAGAAGCAGCACAGCAGCTACGGTCCTTTGGG
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