EY735744

Overview
NameEY735744
Unique NameEY735744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: YHCD_ECOLI (Uncharacterized outer membrane usher protein yhcD OS=Escherichia coli (strain K12) GN=yhcD PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.198e-32
Identity = 80/213 (37.56%), Postives = 116/213 (54.46%), Query Frame = -1
Query:   15 GFNAGDWIVRSRQVQTWQDARSRSTHLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQGSTISGIAN-SPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPA-PGYPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLGLLPWTD 647
            G N  DW++RS Q  T  +    + +   Y QRTF + +  ++AG++NL N VL  A I G+++  + ALQ    G  ++GIAN S A+VE+RQ G LIHS +VPAG F++ DV   N  SD+ VTV E+ G    + VP+ +    + +  GY    GRV    D   + PWVIS      L    ++  GV+ AE+Y+A      L+P  D
Sbjct:  181 GININDWMLRSHQFLTQTNGTFSNQNSSTYLQRTFTDLKTLMRAGEVNLNNSVLEGASIYGIEIAPDNALQTSGSGVQVTGIANTSQARVEIRQQGVLIHSILVPAGAFTIPDVPVRNGNSDLNVTVVETDGSSHNYIVPSTLFNQHVESFQGYRFAIGRV---DDDYDESPWVISASSGWNLTRWSAMNGGVIVAENYQAASIRSSLVPLPD 390          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: YRAJ_ECOLI (Uncharacterized outer membrane usher protein yraJ OS=Escherichia coli (strain K12) GN=yraJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21
Identity = 68/213 (31.92%), Postives = 104/213 (48.83%), Query Frame = -1
Query:   33 RSGFNAGDWIVRSRQVQTWQDARSRSTHLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQ---GSTISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 653
            ++G N G W +R+    T  D  S    + +Y QR     ++ L  G+      + SS   TG+QL ++  +    Q     T+ GIANS A V +RQNG +I+ + V AG F + D+   +   D+EVT++ES G +RRF  P + L + +  PG   Y    GR R   ++   +P          LN   +L  G+L +EDY A G  +G
Sbjct:  210 QNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPM-MQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGIG 421          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: FIMD_SALTY (Outer membrane usher protein fimD OS=Salmonella typhimurium GN=fimD PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16
Identity = 66/222 (29.73%), Postives = 105/222 (47.30%), Query Frame = -1
Query:   21 SGFNAGDWIVRSRQVQTWQDA----RSRSTHLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQ-DQEQG--STISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRA--TGASLGLLPW 650
            SG N G W +R+     +         R  ++  + QR     ++ L  G  N  N V  S    G +L++   +  D  QG   T+ GIA + A++ +RQNG +I+ + V  G F++TD+   ++  D+EVTV E  G ++R+TVP + + + L   G   Y L  G  R+ G+++   P+   G     L   L+   G   A+ YRA   GA   L  W
Sbjct:  204 SGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQRAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPL-LQREGRVKYDLVAGDFRS-GNSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNLGDW 423          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: MYFC_YEREN (Outer membrane usher protein myfC OS=Yersinia enterocolitica GN=myfC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16
Identity = 70/226 (30.97%), Postives = 104/226 (46.02%), Query Frame = -1
Query:   27 RQSFRLGQYRSGFNAGDWIVRSRQVQTWQDARSRSTHLEA---YAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQGS---TISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAP--GYPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLGLL 680
            +QS    Q   GFN G W  R R   +W  + + +   ++   YA R     ++ +  GQ         S   +G+ L  +  +    Q      + GIA S A+VEVRQNG L++STVV  GPF LTD+   ++  D+ VTV ES G  ++FTVP ++  I L      Y L  GR R         P +     +  L   L+   G   +  Y+AT A +G++
Sbjct:  196 QQSSHYVQLYPGFNIGAW--RIRNATSWNQSGNSAGKWQSSYIYATRGLYRLKSRVTLGQSYTPGDFFDSVPFSGVMLGDDDNMLPSSQRDFIPVVRGIARSQARVEVRQNGYLLYSTVVSPGPFELTDILPSHSNGDLHVTVLESNGTTQQFTVPYSVPAIRLRKGRLRYNLMAGRYRPANVDVETTP-IAQATVAYGLPWNLTAFVGGQWSPHYQATTAGMGVM 418          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: PSAC_YERPS (Outer membrane usher protein psaC OS=Yersinia pseudotuberculosis GN=psaC PE=3 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.734e-15
Identity = 70/217 (32.26%), Postives = 95/217 (43.78%), Query Frame = -1
Query:   33 QYRSGFNAGDWIVRSRQVQTWQDARSRSTHLEA---YAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQGS---TISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAP--GYPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 659
            Q   G N G W  R R    W  +  R    ++   YA R     ++ +  G+         S    G+ L  +  +Q   Q      + GIA S AQVE+RQNG LI+STVVP GPF L+DV    + SD+ V V ES G  + F VP  +  I L      Y L  G+ R   +   + P V     +  L   L+   G   +  Y+AT A LG
Sbjct:  192 QLYPGLNLGAW--RVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRP-ANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLG 405          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: PSAC_YERPE (Outer membrane usher protein psaC OS=Yersinia pestis GN=psaC PE=3 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.734e-15
Identity = 70/217 (32.26%), Postives = 95/217 (43.78%), Query Frame = -1
Query:   33 QYRSGFNAGDWIVRSRQVQTWQDARSRSTHLEA---YAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQGS---TISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAP--GYPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 659
            Q   G N G W  R R    W  +  R    ++   YA R     ++ +  G+         S    G+ L  +  +Q   Q      + GIA S AQVE+RQNG LI+STVVP GPF L+DV    + SD+ V V ES G  + F VP  +  I L      Y L  G+ R   +   + P V     +  L   L+   G   +  Y+AT A LG
Sbjct:  192 QLYPGLNLGAW--RVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRP-ANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLG 405          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: YEHB_ECOLI (Uncharacterized outer membrane usher protein yehB OS=Escherichia coli (strain K12) GN=yehB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.090e-15
Identity = 55/176 (31.25%), Postives = 91/176 (51.70%), Query Frame = -1
Query:   51 YAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTE-QALQDQEQGST--ISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRA 560
            Y +R FA+    L+ G +   + +  S +  G++LF + Q L + +Q  T  + GIA S A V + QNG +++   VP GPF++TD++     +D++V+VKE+ G    + VP A +   +  PG   Y L  GR    G ++  D   +  G+    N  L+L  G + A +Y A
Sbjct:  213 YLERGFAQLLGTLRVGDMYTSSDIFDSVRFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVP-NMLQPGVSKYDLAAGRSHIEGASKQSD--FVQAGYQYGFNNLLTLYGGSMVANNYYA 385          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: SFMD_ECOLI (Outer membrane usher protein sfmD OS=Escherichia coli (strain K12) GN=sfmD PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.090e-15
Identity = 60/218 (27.52%), Postives = 101/218 (46.33%), Query Frame = -1
Query:   33 SGFNAGDWIVRSRQVQTWQDARSRSTHLE------AYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQ-DQEQG--STISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 650
            SG N G W  R R   +W   R    H E       + QR     ++ L  G  N  + +       G++L++   +  D +QG   T+ GIA + AQ+ +RQNG +I+ + V  G F +TD+   ++  D++VT+ E  G ++ +T+P + + I L   G   + L  G  R+ G+++   P+   G   G L    +   G   + +Y A    LG
Sbjct:  203 SGINIGPW--RLRNNGSWNYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPI-LQREGRFKFDLTAGDFRS-GNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLG 416          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: LPFC_SALTY (Outer membrane usher protein lpfC OS=Salmonella typhimurium GN=lpfC PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15
Identity = 61/213 (28.64%), Postives = 97/213 (45.54%), Query Frame = -1
Query:   33 RSGFNAGDWIVRSRQVQTWQDARSRSTHLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFT-EQALQDQEQG--STISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 653
            RSG N G W +R+    T  D  +   ++     R     ++ L  G  +    +  S Q+ G+QL + E+ L D ++G    I GIA S A+V V QN  +I+ T V  G F + D+   +   D+ VT+KES G E++F  P + + + L   G   Y L  G  R  G+    +P          L    ++  G + ++DY +    LG
Sbjct:  212 RSGMNLGAWRLRNYSTWTRNDGNNTWDNIGTSLSRAIVPLKSQLTLGDTSTAGDIFDSVQMRGVQLTSDEEMLPDSQRGFAPVIRGIAKSNAEVTVEQNNYVIYRTFVQPGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFSSVAL-LQREGHLKYSLSAGEYR-AGNYNSAEPKFGQLDAMYGLPYGFTVYGGAIFSDDYYSLAGGLG 422          
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: FOCD_ECOLX (Outer membrane usher protein focD OS=Escherichia coli GN=focD PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.039e-14
Identity = 56/217 (25.81%), Postives = 100/217 (46.08%), Query Frame = -1
Query:   33 RSGFNAGDWIVRSRQVQTWQDARSRST----HLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQAL-QDQEQG--STISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 653
            ++G N G W +R     ++   +  S     H+  + +R     ++ L  G       +       G+QL ++  +  D ++G   TI GI+   +++ +RQNG  I+ + +P GPF + D+    +  D++VT++E+ G  +RF VP + + + L   G   Y L  G  R+ G  + D+P    G     L    ++  G   AE YRA    +G
Sbjct:  213 KTGLNIGSWRLRDNTSWSYSAGKGYSQNNWQHINTWLERDIVSLRSRLTMGDSYTRGDIFDGVNFRGIQLASDDNMVPDSQRGYAPTIHGISRGTSRISIRQNGYEIYQSTLPPGPFEINDIYPAGSGGDLQVTLQEADGSVQRFNVPWSSVPV-LQREGHLKYALSAGEFRS-GGHQQDNPRFAEGTLKYGLPDGWTVYGGAWIAERYRAFNLGVG 427          
The following BLAST results are available for this feature:
BLAST of EY735744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
YHCD_ECOLI4.198e-3237.56Uncharacterized outer membrane usher protein yhcD ... [more]
YRAJ_ECOLI5.687e-2131.92Uncharacterized outer membrane usher protein yraJ ... [more]
FIMD_SALTY2.472e-1629.73Outer membrane usher protein fimD OS=Salmonella ty... [more]
MYFC_YEREN5.508e-1630.97Outer membrane usher protein myfC OS=Yersinia ente... [more]
PSAC_YERPS2.734e-1532.26Outer membrane usher protein psaC OS=Yersinia pseu... [more]
PSAC_YERPE2.734e-1532.26Outer membrane usher protein psaC OS=Yersinia pest... [more]
YEHB_ECOLI6.090e-1531.25Uncharacterized outer membrane usher protein yehB ... [more]
SFMD_ECOLI6.090e-1527.52Outer membrane usher protein sfmD OS=Escherichia c... [more]
LPFC_SALTY7.954e-1528.64Outer membrane usher protein lpfC OS=Salmonella ty... [more]
FOCD_ECOLX1.039e-1425.81Outer membrane usher protein focD OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-D06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735744 ID=EY735744; Name=EY735744; organism=Citrus sinensis; type=EST; length=863bp
AGTTGTACCTGGCCGTCTGTCCATGGCAACAGGCCGAGGCTGGCACCCGT
GGCACGGTAGTCTTCGGCGGCAAGCACGCCGGCCCCCAGGCTCAGGCGCG
GGTTCAAGGCGCCGCTCCAGCCGCCGCTGATCACCCATGGGTCGTCGCCC
CGTGTATCGCCGATATTGCGCACCCGGCCTGTCCCCAACGGGTAACCCGG
CGCTGGCAGGCCGATGCCGAGCATCGCCGCCGGTACGGTGAAGCGCCGTT
CTTCGCCGGTGCTTTCCTTGACCGTCACTTCAACGTCTGAGCGCGTGTTC
AGGCGCCGTACATCCGTGAGGGAAAACGGCCCGGCCGGCACCACCGTGGA
GTGAATCAGCGCGCCGTTCTGGCGCACCTCCACCTGGGCCGGGCTGTTGG
CGATGCCGCTGATGGTCGAGCCCTGTTCCTGGTCCTGCAGGGCTTGTTCG
GTAAACAGCTGCATGCCGGTGATCTGTGCGGATGACAGCACCGGGTTGTA
AAGGTTGATCTGCCCGGCCTGCAACCCCGCCTGCTGCTCGGCGAAGGTGC
GCTGGGCATAGGCTTCCAGGTGGGTACTGCGGGAACGGGCGTCTTGCCAG
GTCTGTACCTGGCGGCTGCGCACGATCCAGTCGCCCGCGTTGAACCCACT
TCGGTATTGGCCGAGCCGAAACGACTGGCGTCGTCNCCATAGCGGGTGGT
AAAACCGGGTGAGGCGNTAGTGGAACAAAACGGNGAAATCTCCGGGTGTG
GTAACCGGGAGANGTCAGTGGGGNGTTGGGCCCAGGGGGATGGGGGGGGG
NCAGGGAGGGCCCAGGCCCANGCGGGNNNGGGTNNNNNNNCNNACANNNG
GGGGGGGGGAAGG
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