EY735744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: YHCD_ECOLI (Uncharacterized outer membrane usher protein yhcD OS=Escherichia coli (strain K12) GN=yhcD PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.198e-32 Identity = 80/213 (37.56%), Postives = 116/213 (54.46%), Query Frame = -1 Query: 15 GFNAGDWIVRSRQVQTWQDARSRSTHLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQGSTISGIAN-SPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPA-PGYPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLGLLPWTD 647 G N DW++RS Q T + + + Y QRTF + + ++AG++NL N VL A I G+++ + ALQ G ++GIAN S A+VE+RQ G LIHS +VPAG F++ DV N SD+ VTV E+ G + VP+ + + + GY GRV D + PWVIS L ++ GV+ AE+Y+A L+P D Sbjct: 181 GININDWMLRSHQFLTQTNGTFSNQNSSTYLQRTFTDLKTLMRAGEVNLNNSVLEGASIYGIEIAPDNALQTSGSGVQVTGIANTSQARVEIRQQGVLIHSILVPAGAFTIPDVPVRNGNSDLNVTVVETDGSSHNYIVPSTLFNQHVESFQGYRFAIGRV---DDDYDESPWVISASSGWNLTRWSAMNGGVIVAENYQAASIRSSLVPLPD 390
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: YRAJ_ECOLI (Uncharacterized outer membrane usher protein yraJ OS=Escherichia coli (strain K12) GN=yraJ PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.687e-21 Identity = 68/213 (31.92%), Postives = 104/213 (48.83%), Query Frame = -1 Query: 33 RSGFNAGDWIVRSRQVQTWQDARSRSTHLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQ---GSTISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 653 ++G N G W +R+ T D S + +Y QR ++ L G+ + SS TG+QL ++ + Q T+ GIANS A V +RQNG +I+ + V AG F + D+ + D+EVT++ES G +RRF P + L + + PG Y GR R ++ +P LN +L G+L +EDY A G +G Sbjct: 210 QNGANFGPWRLRNYSTWTRNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLPM-MQRPGHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYALGIGIG 421
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: FIMD_SALTY (Outer membrane usher protein fimD OS=Salmonella typhimurium GN=fimD PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.472e-16 Identity = 66/222 (29.73%), Postives = 105/222 (47.30%), Query Frame = -1 Query: 21 SGFNAGDWIVRSRQVQTWQDA----RSRSTHLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQ-DQEQG--STISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRA--TGASLGLLPW 650 SG N G W +R+ + R ++ + QR ++ L G N N V S G +L++ + D QG T+ GIA + A++ +RQNG +I+ + V G F++TD+ ++ D+EVTV E G ++R+TVP + + + L G Y L G R+ G+++ P+ G L L+ G A+ YRA GA L W Sbjct: 204 SGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQRAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPL-LQREGRVKYDLVAGDFRS-GNSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNLGDW 423
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: MYFC_YEREN (Outer membrane usher protein myfC OS=Yersinia enterocolitica GN=myfC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.508e-16 Identity = 70/226 (30.97%), Postives = 104/226 (46.02%), Query Frame = -1 Query: 27 RQSFRLGQYRSGFNAGDWIVRSRQVQTWQDARSRSTHLEA---YAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQGS---TISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAP--GYPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLGLL 680 +QS Q GFN G W R R +W + + + ++ YA R ++ + GQ S +G+ L + + Q + GIA S A+VEVRQNG L++STVV GPF LTD+ ++ D+ VTV ES G ++FTVP ++ I L Y L GR R P + + L L+ G + Y+AT A +G++ Sbjct: 196 QQSSHYVQLYPGFNIGAW--RIRNATSWNQSGNSAGKWQSSYIYATRGLYRLKSRVTLGQSYTPGDFFDSVPFSGVMLGDDDNMLPSSQRDFIPVVRGIARSQARVEVRQNGYLLYSTVVSPGPFELTDILPSHSNGDLHVTVLESNGTTQQFTVPYSVPAIRLRKGRLRYNLMAGRYRPANVDVETTP-IAQATVAYGLPWNLTAFVGGQWSPHYQATTAGMGVM 418
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: PSAC_YERPS (Outer membrane usher protein psaC OS=Yersinia pseudotuberculosis GN=psaC PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.734e-15 Identity = 70/217 (32.26%), Postives = 95/217 (43.78%), Query Frame = -1 Query: 33 QYRSGFNAGDWIVRSRQVQTWQDARSRSTHLEA---YAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQGS---TISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAP--GYPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 659 Q G N G W R R W + R ++ YA R ++ + G+ S G+ L + +Q Q + GIA S AQVE+RQNG LI+STVVP GPF L+DV + SD+ V V ES G + F VP + I L Y L G+ R + + P V + L L+ G + Y+AT A LG Sbjct: 192 QLYPGLNLGAW--RVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRP-ANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLG 405
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: PSAC_YERPE (Outer membrane usher protein psaC OS=Yersinia pestis GN=psaC PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.734e-15 Identity = 70/217 (32.26%), Postives = 95/217 (43.78%), Query Frame = -1 Query: 33 QYRSGFNAGDWIVRSRQVQTWQDARSRSTHLEA---YAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQDQEQGS---TISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAP--GYPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 659 Q G N G W R R W + R ++ YA R ++ + G+ S G+ L + +Q Q + GIA S AQVE+RQNG LI+STVVP GPF L+DV + SD+ V V ES G + F VP + I L Y L G+ R + + P V + L L+ G + Y+AT A LG Sbjct: 192 QLYPGLNLGAW--RVRNATNWSQSGDRGGKWQSAYTYATRGIYRLKSRVTLGESYTPGDFFDSIPFRGVMLGDDPNMQPSNQRDFIPVVRGIARSQAQVEIRQNGYLIYSTVVPPGPFELSDVIPSKSGSDLHVRVLESNGASQAFIVPYEVPAIALRKGHLRYNLVAGQYRP-ANADVETPPVAQATVAYGLPWNLTAFIGEQWSRHYQATSAGLG 405
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: YEHB_ECOLI (Uncharacterized outer membrane usher protein yehB OS=Escherichia coli (strain K12) GN=yehB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.090e-15 Identity = 55/176 (31.25%), Postives = 91/176 (51.70%), Query Frame = -1 Query: 51 YAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTE-QALQDQEQGST--ISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRA 560 Y +R FA+ L+ G + + + S + G++LF + Q L + +Q T + GIA S A V + QNG +++ VP GPF++TD++ +D++V+VKE+ G + VP A + + PG Y L GR G ++ D + G+ N L+L G + A +Y A Sbjct: 213 YLERGFAQLLGTLRVGDMYTSSDIFDSVRFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVP-NMLQPGVSKYDLAAGRSHIEGASKQSD--FVQAGYQYGFNNLLTLYGGSMVANNYYA 385
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: SFMD_ECOLI (Outer membrane usher protein sfmD OS=Escherichia coli (strain K12) GN=sfmD PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.090e-15 Identity = 60/218 (27.52%), Postives = 101/218 (46.33%), Query Frame = -1 Query: 33 SGFNAGDWIVRSRQVQTWQDARSRSTHLE------AYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQALQ-DQEQG--STISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 650 SG N G W R R +W R H E + QR ++ L G N + + G++L++ + D +QG T+ GIA + AQ+ +RQNG +I+ + V G F +TD+ ++ D++VT+ E G ++ +T+P + + I L G + L G R+ G+++ P+ G G L + G + +Y A LG Sbjct: 203 SGINIGPW--RLRNNGSWNYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPI-LQREGRFKFDLTAGDFRS-GNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLG 416
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: LPFC_SALTY (Outer membrane usher protein lpfC OS=Salmonella typhimurium GN=lpfC PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.954e-15 Identity = 61/213 (28.64%), Postives = 97/213 (45.54%), Query Frame = -1 Query: 33 RSGFNAGDWIVRSRQVQTWQDARSRSTHLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFT-EQALQDQEQG--STISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 653 RSG N G W +R+ T D + ++ R ++ L G + + S Q+ G+QL + E+ L D ++G I GIA S A+V V QN +I+ T V G F + D+ + D+ VT+KES G E++F P + + + L G Y L G R G+ +P L ++ G + ++DY + LG Sbjct: 212 RSGMNLGAWRLRNYSTWTRNDGNNTWDNIGTSLSRAIVPLKSQLTLGDTSTAGDIFDSVQMRGVQLTSDEEMLPDSQRGFAPVIRGIAKSNAEVTVEQNNYVIYRTFVQPGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFSSVAL-LQREGHLKYSLSAGEYR-AGNYNSAEPKFGQLDAMYGLPYGFTVYGGAIFSDDYYSLAGGLG 422
BLAST of EY735744 vs. ExPASy Swiss-Prot
Match: FOCD_ECOLX (Outer membrane usher protein focD OS=Escherichia coli GN=focD PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.039e-14 Identity = 56/217 (25.81%), Postives = 100/217 (46.08%), Query Frame = -1 Query: 33 RSGFNAGDWIVRSRQVQTWQDARSRST----HLEAYAQRTFAEQQAGLQAGQINLYNPVLSSAQITGMQLFTEQAL-QDQEQG--STISGIANSPAQVEVRQNGALIHSTVVPAGPFSLTDVRRLNTRSDVEVTVKESTGEERRFTVPAAMLGIGLPAPG---YPLGTGRVRNIGDTRGDDPWVISGGWSGALNPRLSLGAGVLAAEDYRATGASLG 653 ++G N G W +R ++ + S H+ + +R ++ L G + G+QL ++ + D ++G TI GI+ +++ +RQNG I+ + +P GPF + D+ + D++VT++E+ G +RF VP + + + L G Y L G R+ G + D+P G L ++ G AE YRA +G Sbjct: 213 KTGLNIGSWRLRDNTSWSYSAGKGYSQNNWQHINTWLERDIVSLRSRLTMGDSYTRGDIFDGVNFRGIQLASDDNMVPDSQRGYAPTIHGISRGTSRISIRQNGYEIYQSTLPPGPFEINDIYPAGSGGDLQVTLQEADGSVQRFNVPWSSVPV-LQREGHLKYALSAGEFRS-GGHQQDNPRFAEGTLKYGLPDGWTVYGGAWIAERYRAFNLGVG 427 The following BLAST results are available for this feature:
BLAST of EY735744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735744 ID=EY735744; Name=EY735744; organism=Citrus sinensis; type=EST; length=863bpback to top |