EY735743

Overview
NameEY735743
Unique NameEY735743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length359
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.852e-18
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLAK 145
            FVGD+RSSIFDAKAGIALS KFVKLVSWYDNEWGYS+RVVD IVH++K
Sbjct:  290 FVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHMSK 337          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_ANTMA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.724e-18
Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLAKNQ 151
            FVGDSRSSIFDAKAGIAL+  FVKLVSWYDNEWGYSTRVVD IVH+A  Q
Sbjct:  288 FVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIVHMASVQ 337          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.864e-18
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLAK 145
            FVGD+RSSIFDAKAGIALS  FVKLVSWYDNEWGYSTRVVD I+H++K
Sbjct:  290 FVGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSTRVVDLIIHMSK 337          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.297e-18
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLA 142
            FVGDSRSSIFDAKAGIALSK FVKLVSWYDNEWGYS+RV+D I H+A
Sbjct:  277 FVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLICHMA 323          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.084e-17
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLAKNQ 151
            F+GDSRSSIFDA+AGIALS  FVKLVSWYDNEWGYS+RVVD IVH+A  Q
Sbjct:  291 FIGDSRSSIFDAQAGIALSDNFVKLVSWYDNEWGYSSRVVDLIVHMAATQ 340          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.084e-17
Identity = 41/47 (87.23%), Postives = 45/47 (95.74%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLA 142
            FVGDSRSSIFDAKAGIALSKKFVK+V+WYDNEWGYS+RVVD I H+A
Sbjct:  288 FVGDSRSSIFDAKAGIALSKKFVKIVAWYDNEWGYSSRVVDLIRHMA 334          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.415e-17
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLAKNQ 151
            FVGDSRSSIFDAKAGIAL+  FVKLVSWYDNEWGYS RVVD I H+AK Q
Sbjct:  288 FVGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMAKTQ 337          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.153e-17
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLAKNQ 151
            FVGDSRSSIFDAKAGIAL+  FVKLV+WYDNEWGYS RV+D I H+AK Q
Sbjct:  288 FVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.153e-17
Identity = 40/50 (80.00%), Postives = 44/50 (88.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLAKNQ 151
            FVGDSRSSIFDAKAGIAL+  FVKLV+WYDNEWGYS RV+D I H+AK Q
Sbjct:  288 FVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337          
BLAST of EY735743 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.153e-17
Identity = 39/50 (78.00%), Postives = 46/50 (92.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDWIVHLAKNQ 151
            F+GD+RSSIFDAKAGI+L+  FVKLVSWYDNEWGYSTRVVD I+H++K Q
Sbjct:  288 FIGDNRSSIFDAKAGISLNDNFVKLVSWYDNEWGYSTRVVDLIMHISKCQ 337          
The following BLAST results are available for this feature:
BLAST of EY735743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
G3PC_ARATH2.852e-1887.50Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ANTMA3.724e-1886.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_SINAL4.864e-1885.42Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TOBAC8.297e-1887.23Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PINSY1.084e-1782.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_CRAPL1.084e-1787.23Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PX_HORVU1.415e-1784.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSJ3.153e-1780.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSI3.153e-1780.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR3.153e-1778.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-D05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735743 ID=EY735743; Name=EY735743; organism=Citrus sinensis; type=EST; length=359bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATTTGTGAAGCTTGTCTCATGGTATGACAATGAGTGG
GGCTACAGTACTCGTGTGGTGGATTGGATTGTCCACCTGGCGAAGAACCA
GTAACTTACTCGGCGTGGCTTGAGTATGTACCACGCTTAGGGGTGCTAAG
TGTGGGTGTGCTTTGCGCCAAATGTGGGGTTGGGGTTCGAGGGAGAGGGT
CCGAGATAGACAAAGGGGTGCGAGAACTGATCAAGAGCCTGGCGGGGCAA
GGCGGGTGGGGCAGAGGAGGGGCGGGGGGTATGCAGAACAAGTGGGGGCG
GTGGGGTTT
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