EY735742
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY735742 vs. ExPASy Swiss-Prot
Match: PSMD9_RAT (26S proteasome non-ATPase regulatory subunit 9 OS=Rattus norvegicus GN=Psmd9 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.214e-22 Identity = 64/225 (28.44%), Postives = 116/225 (51.56%), Query Frame = 3 Query: 96 AEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDVSPAAEDGLQLGDQVLKFGTVEAGD-NLLKRLAAEGRKNQGNAVPVVIMXASGLINLAVTPRPWQGQGLLGCHFRMLQ 767 ++I LM ++ +EA + A D L G G++ LVD EG+PR D+D++ VR+ R + L+NDHK + +++ E + LH A+D + + + + N + +SPA + + FA ++ I+ SPA+ GLQ+ D++++FG+V + L+ + + ++G + V+++ L +TP W G+GLLGC+ LQ Sbjct: 21 SDIQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNIICLQNDHKALMKQVEEALHQLH----------ARD-------KEKQARDMAEAREEAMNRRLASDSPA-------LPKAFARVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLQNVGTVVQHSEGKPLNVMVIRRGEKHQLRLTPTRWAGKGLLGCNITPLQ 221
BLAST of EY735742 vs. ExPASy Swiss-Prot
Match: PSMD9_MOUSE (26S proteasome non-ATPase regulatory subunit 9 OS=Mus musculus GN=Psmd9 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.435e-21 Identity = 62/225 (27.56%), Postives = 115/225 (51.11%), Query Frame = 3 Query: 96 AEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDVSPAAEDGLQLGDQVLKFGTVEAGD-NLLKRLAAEGRKNQGNAVPVVIMXASGLINLAVTPRPWQGQGLLGCHFRMLQ 767 ++I LM ++ +EA++ A D L G G++ LVD EG+PR D+D++ VR+ R + L+NDHK + +++ E + LH A+D + + + + N + NSP ++ + FA ++ I+ SPA+ GLQ+ D++++FG+V + ++ + + ++G + V ++ L + P W G+GLLGC+ LQ Sbjct: 21 SDIQDLMRRKEEIEAEIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNIICLQNDHKALMKQVEEALHQLH----------ARD-------KEKQARDMAEAREEAMNRRLASNSP-------VLPQAFARVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSVQNVGTVVQHSEGKPLNVTVIRRGEKHQLRLIPTRWAGKGLLGCNIIPLQ 221
BLAST of EY735742 vs. ExPASy Swiss-Prot
Match: PSMD9_DICDI (Probable 26S proteasome non-ATPase regulatory subunit 9 OS=Dictyostelium discoideum GN=psmD9 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.176e-21 Identity = 67/238 (28.15%), Postives = 123/238 (51.68%), Query Frame = 3 Query: 102 IMSLMEKRSALEADMNAIIDRLSQSNGP--GLSGNLVDSEGFPRTDIDIHL-VRSERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDD-------GGSNNQNPSILGTVQSASFNNAVPRNSPAAMDVDVI-IRRPFAVIDEITDVSPAAEDGLQLGDQVLKFGTV-------EAGDNL----LKRLAAEGRKNQGNAVPVVIMXASGLINLAVTPRPWQGQGLLGC 749 I +LM R LE ++ ++++ L +G GL G+ DSEG+P +++ + V+ R R+A ++ND+K++ + I +++ LH + PT+ S SNN N + ++ P ++V+V + PF ID +++ SP+ + L+ GD + +FGTV + GDNL L+ +A R ++ A+ + + + +I+ ++ PR W GQGL+GC Sbjct: 25 IKTLMVTRGDLEKELESLMNFLKSGDGKTFGLKGSFTDSEGYPSPHLELIIEVKKARSRIAHIQNDYKQVMKDIEFHLEKLHKS-----PTNKNQSSSTFSINNTTSTSNNNNNNNEDEMKIDKPLTVETETKPKPIEVEVEKVGIPFVYIDLVSEGSPSDKANLKKGDLIFQFGTVGPFFEERQVGDNLNSNHLQSIATIVRNSENKAIQIKLSRGTSIISTSLIPRKWSGQGLIGC 257
BLAST of EY735742 vs. ExPASy Swiss-Prot
Match: PSMD9_HUMAN (26S proteasome non-ATPase regulatory subunit 9 OS=Homo sapiens GN=PSMD9 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.587e-20 Identity = 62/234 (26.50%), Postives = 114/234 (48.72%), Query Frame = 3 Query: 69 AKMVGTNLKAEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDVSPAAEDGLQLGDQVLKFGTVEAGD-NLLKRLAAEGRKNQGNAVPVVIMXASGLINLAVTPRPWQGQGLLGCHFRMLQ 767 + G +++ LM ++ +EA + A D L G G++ LVD EG+PR+D+D++ VR+ R + L+NDHK + +++ E + LH+ K + D ++ + S + + P R FA ++ I+ SPA+ GLQ+ D++++FG+V + L + + + ++G + V ++ L + P W G+GLLGC+ LQ Sbjct: 12 SSQAGAVTVSDVQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRSDVDLYQVRTARHNIICLQNDHKAVMKQVEEALHQLHAR------DKEKQARDMAEAHKE-------AMSRKLGQSESQGPP----------RAFAKVNSISPGSPASIAGLQVDDEIVEFGSVNTQNFQSLHNIGSVVQHSEGKPLNVTVIRRGEKHQLRLVPTRWAGKGLLGCNIIPLQ 222
BLAST of EY735742 vs. ExPASy Swiss-Prot
Match: PSMD9_BOVIN (26S proteasome non-ATPase regulatory subunit 9 OS=Bos taurus GN=PSMD9 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.707e-20 Identity = 60/225 (26.67%), Postives = 113/225 (50.22%), Query Frame = 3 Query: 96 AEIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDVSPAAEDGLQLGDQVLKFGTVEAGD-NLLKRLAAEGRKNQGNAVPVVIMXASGLINLAVTPRPWQGQGLLGCHFRMLQ 767 +++ L+ ++ +EA + A + L G G++ LVD EG+PR D+D++ VR+ R + L+NDHK + +++ + + LH+ ++ + S +Q+ + SPA + FA ++ I+ SPA+ GLQ+ D++L+FG+V + L+ + + + ++G + V +M L + P W G+GLLGC+ LQ Sbjct: 21 SDVQELIRRKEEIEAQIKANYEVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNIVCLQNDHKAVMKQVEDALHQLHARDKEKQARDLAEAHREALSRDQSQGL----------------SPA---------QAFAKVNSISPGSPASIAGLQVDDEILEFGSVNTQNFQSLQNIGSVVQHSEGKPLNVTVMRRGEKHQLRLVPTRWAGKGLLGCNIIPLQ 220
BLAST of EY735742 vs. ExPASy Swiss-Prot
Match: PSMD9_SCHPO (Probable 26S proteasome regulatory subunit p27 OS=Schizosaccharomyces pombe GN=nas2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.283e-16 Identity = 61/228 (26.75%), Postives = 105/228 (46.05%), Query Frame = 3 Query: 114 MEKRSALEADMNAIIDRLSQSNGPGLSGN------LVDSEGFPRTDIDIHLVRSERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNAVPRNSPAAMDVDVIIR-RPFAVIDEITDVSPAAEDGLQLGDQVLKFGTVEAGDNLLKRLAAEGRKNQGNAVPVVIM------XASGLINLAVTPRPWQGQGLLGCHFR 758 M++ L+ I +RL++ G L L+ +GFPR+DID+ +R+ R + LRNDH+E+ ++I + ++ + S + + N + +FN A + ++ R +PF V+D + SPA E GL +GD+++ V + L L N + V+++ ++ L+ L +TP WQG GLLGCH R Sbjct: 1 MDEFKQLDLKKREIENRLNELEGVLLKERVTMDTPLLTEDGFPRSDIDVPSIRTARHEIITLRNDHRELEDQIKKVLEKVFSG-----------FSKESLAANDETKLAQEADPLNFNAANYNMNDIISRSKILGRVKPFCVVDSVAVESPAQEAGLCIGDELVHVQNVTS----LSELPTFISNNVNKTLDVLLIRGYSADGSTNLVELKLTPHKWQGPGLLGCHLR 213
BLAST of EY735742 vs. ExPASy Swiss-Prot
Match: PSMD9_YEAST (Probable 26S proteasome regulatory subunit p27 OS=Saccharomyces cerevisiae GN=NAS2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.186e-13 Identity = 56/224 (25.00%), Postives = 100/224 (44.64%), Query Frame = 3 Query: 99 EIMSLMEKRSALEADMNAIIDRLSQSNGPGLSGNLVDSEGFPRTDIDIHLVRSERRRLAELRNDHKEITEKINENIQLLHSARLVPVPTSAKDSGDDGGSNNQNPSILGTVQSASFNNAVPRNSPAAMDVDVIIRRPFAVIDEITDVSPAAEDGLQLGDQVLKFGTVEAGD-NLLKRLAAEGRKNQGNAVPVVIMXASGLINLAVTP-RPWQGQGLLGCHFRML 764 ++ LM ++ +E + A L Q G G+ LV +G+PR+D+D+ V R+ + L+ND +N +Q H S D NN + +I T+ PFA I E+ SP+ + +++ D+++ G V A + + L+ + KN+ +PV+++ ++ ++TP R W G+GLLGC + L Sbjct: 30 KLSELMVLKTDIETQLEAYFSVLEQQ-GIGMDSALVTPDGYPRSDVDVLQVTMIRKNVNMLKND-------LNHLLQRSHVLLNQHFDNMNVKSNQDARRNNDDQAIQYTI-------------------------PFAFISEVVPGSPSDKADIKVDDKLISIGNVHAANHSKLQNIQMVVMKNEDRPLPVLLLREGQILKTSLTPSRNWNGRGLLGCRIQEL 220 The following BLAST results are available for this feature:
BLAST of EY735742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735742 ID=EY735742; Name=EY735742; organism=Citrus sinensis; type=EST; length=844bpback to top |