EY735736

Overview
NameEY735736
Unique NameEY735736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8206 contig Csv1_Contig8206:140..1025. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1)

HSP 1 Score: 416.001 bits (1068), Expect = 1.418e-115
Identity = 225/286 (78.67%), Postives = 235/286 (82.17%), Query Frame = 3
Query:    6 RPLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE 863
            + LSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAA                       SPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSI+FAGPLATTSISTNAK EVRSPKRVQIKFEEG+IGTPQVTDSL++ ENVEFLG K D            +TASS AKT+ +QPP KFSI  S+A+    T  LDE
Sbjct:   13 KTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDE 298          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 5.268e-78
Identity = 162/277 (58.48%), Postives = 189/277 (68.23%), Query Frame = 3
Query:   42 TSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXS---PKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE 863
            TSK S LP++S            +S++ FT  +P    +A                            PKE +EI+ LKK L DS YGT+RGL+A+SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEEISQTIDSE+FTVQNS+ FAGPLATTSISTNAK EVRSPKRVQIKFEEGIIGTPQ+TDS+++ ENVEFLG K D            +TASS AK++ +QPP KF I  ++A+    T  LD+
Sbjct:   25 TSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKFTAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLDD 301          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 8.985e-78
Identity = 161/277 (58.12%), Postives = 189/277 (68.23%), Query Frame = 3
Query:   42 TSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXS---PKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE 863
            TSK S LP++S        +   +S++ FT  +P    +A                            PKE +EI+ LKK L DS YGT+RGL+A+SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEEISQTIDSE+FTVQNS+ FAGPLATTSISTNAK EVRSPKRVQIKFEEGIIGTPQ+TDS+++ ENVEFLG K D            +TASS  K++ +QPP KF I  ++A+    T  LD+
Sbjct:   25 TSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKFTAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLDD 301          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.002e-77
Identity = 166/297 (55.89%), Postives = 199/297 (67.00%), Query Frame = 3
Query:    6 RPLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPLVLTRAAXXXXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE---IFGGRGG 884
            + L+ NPP  Q TSKPS+ P+ S+   +R+ A KS +S++   + R  VL                            P E +EI  LKKALVDSFYGTDRGL  + +TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL YT+F+GLFPLLSR  LPL +VEEISQTIDSEN TVQNS++F+GPLATTSI+TNAK EVRSP RV IKFEEG+IGTPQ+TDS++I +NV+FLG K D            +TAS+ AKT+ +QPP KFSI  +       T  LDE   I  G GG
Sbjct:   13 KTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRA-VLNDDEWGEDKDEKYGDDSSVAVAEKEEEKPLEPSEIYKLKKALVDSFYGTDRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVKVEEISQTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDLRISRGDGG 307          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.064e-70
Identity = 142/218 (65.14%), Postives = 169/218 (77.52%), Query Frame = 3
Query:  240 KEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE---IFGGRGG 884
            + V E + LK++LVDS YGTDRGL+A+SETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL YTSF GLFPLLSRG +PL +V+EISQTIDS+NFTV+NS+ FAGPLATTSISTNAK E+RSPKRVQIKFEEG+IGTPQ+TDS+ I E VEFLG K D            +TA+S A+T+ +QPP KFS+   SA+    T  LD+   I  G GG
Sbjct:   87 ESVEETEVLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDEISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDIRISRGDGG 304          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 9.006e-70
Identity = 140/218 (64.22%), Postives = 167/218 (76.61%), Query Frame = 3
Query:  240 KEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE---IFGGRGG 884
            ++V E + LK++LVDS YGTDRGL+A+SETRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF  LFPLLSRG +PL +V+EISQTIDS+NFTVQNS+RFAGPL T SISTNAK E+RSPKRVQIKFE+G+IGTPQ+TDS+ I E VE LG K D            +TASS A+T+ +QPP KFS+   +A+    T  LD+   I  G GG
Sbjct:   78 EDVEETERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGG 295          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.590e-66
Identity = 134/218 (61.47%), Postives = 161/218 (73.85%), Query Frame = 3
Query:  240 KEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE---IFGGRGG 884
            + V E + LK++L DS YGTDRGL+ +S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF GLFPLLSR   PL +V+EISQTIDS++FTVQNS+RFAGP +TTS STNAK E+RSPKRVQIKFE+G+IGTPQ+TDS+ I E+VE LG K D            +TASS A+T+  QPP KFS+   + +    T  LD+   I  G GG
Sbjct:   86 ESVEETERLKRSLADSLYGTDRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGG 303          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.542e-66
Identity = 136/214 (63.55%), Postives = 159/214 (74.30%), Query Frame = 3
Query:  252 EIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE---IFGGRGG 884
            E + LK+ L  S YGTDRGL+A+SETRAEI ELITQLE+KNP PAP EAL LLN KWILVYTSF GLFPLLSR   PL +V+EISQTIDS++FTV NS+RFA PLATTS+STNAK EVRSPKRVQ+KFE+G+IGTPQ+TDS+ I E VE LG K D            +TASS A+T+ +QPP KFS+   SA+    T  LD+   I  G GG
Sbjct:   99 ETERLKRVLAGSLYGTDRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKVDEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDLRISRGDGG 312          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.329e-64
Identity = 130/206 (63.11%), Postives = 152/206 (73.79%), Query Frame = 3
Query:  249 TEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLP-LARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE 863
            +E+  LK  L ++ YGT+RGL A+SETRAE+VELITQLEA+NPTPAPTEALTLLN KWIL YTSFS LFPLL  G+LP L +VEEISQTIDSENFTVQN I+F+GPLATTS+STNAK EVRSPKRVQIKF+EGIIGTPQ+TDS+++ E  E  G   D              ASS A+T+  QPP K  I   +A     T  LD+
Sbjct:   90 SEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNAESWLLTTYLDD 295          
BLAST of EY735736 vs. ExPASy Swiss-Prot
Match: PG1_PEA (Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.187e-37
Identity = 84/213 (39.44%), Postives = 123/213 (57.75%), Query Frame = 3
Query:  255 IDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSISTNAKCEVRSPKRVQIKFEEGIIGTPQVTDSLLIAENVEFLGTKDDXXXXXXXXXXXXETASSGAKTLLTQPPCKFSIVXSSARHGWRTRSLDE---IFGGRGG 884
            ++ LK++LVD+ YGT+ G  A SE RAE+ E + QLEA NPTPAP E   LLN  W+L+YT+ S L PLL+ G+LPL ++++ISQTID+++FTV NS   + P A+ S S +A  EVRSP R+Q+ F+EG +  P++   + + EN+   G +                 ++ ++ +  Q P K  I          T  LD+   I  G GG
Sbjct:  132 LEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTASSELLPLLAAGSLPLLKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSPTRIQVTFKEGSLQPPEIKSKIDLPENINIFGQQLSLGPLLQSLGPLENVVANISRVISGQSPLKIPIPGERTSSWLITTYLDKDLRISRGDGG 344          
The following BLAST results are available for this feature:
BLAST of EY735736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PAP_CITUN1.418e-11578.67Plastid-lipid-associated protein, chloroplastic OS... [more]
LIPC_SOLTU5.268e-7858.48Light-induced protein, chloroplastic OS=Solanum tu... [more]
LIPC_SOLDE8.985e-7858.12Light-induced protein, chloroplastic OS=Solanum de... [more]
CHRC_CUCSA2.002e-7755.89Chromoplast-specific carotenoid-associated protein... [more]
PAP2_BRACM1.064e-7065.14Plastid lipid-associated protein 2, chloroplastic ... [more]
PAP2_ARATH9.006e-7064.22Probable plastid-lipid-associated protein 2, chlor... [more]
PAP1_ARATH1.590e-6661.47Probable plastid-lipid-associated protein 1, chlor... [more]
PAP1_BRACM3.542e-6663.55Plastid lipid-associated protein 1, chloroplastic ... [more]
PAP2_ORYSJ4.329e-6463.11Probable plastid-lipid-associated protein 2, chlor... [more]
PG1_PEA1.187e-3739.44Plastoglobulin-1, chloroplastic OS=Pisum sativum G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-C10-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735736 ID=EY735736; Name=EY735736; organism=Citrus sinensis; type=EST; length=886bp
CCACGCGTCCGCTTTCACAAAACCCACCACACAATCAGTTCACCTCGAAG
CCTTCAATTCTTCCTTTGAACTCGGTTCGAATTTCACGGAGTCTCGCCAA
GAAATCATTTCTTTCAATCCAAGGATTCACTCGGGCCAGGCCGCTGGTTC
TAACTCGGGCTGCCGATGATGATGAGTGGGGCCCGGAGAAGGAGAAGGAG
GAAGGTGGCGCTCTGGCGGTGGCAGAGGAGGAGAGCCCAAAAGAAGTTAC
AGAGATTGATAATTTGAAGAAAGCGCTTGTGGATTCGTTTTATGGGACCG
ATCGTGGATTGAATGCCACAAGTGAGACGAGGGCTGAGATCGTTGAGCTT
ATTACGCAGCTTGAGGCTAAGAATCCAACCCCGGCTCCCACCGAGGCCTT
AACTCTGCTAAATGCCAAATGGATTCTTGTGTACACATCTTTTTCAGGTT
TGTTTCCGTTGTTGTCAAGGGGAACATTGCCATTGGCGAGGGTGGAGGAG
ATATCTCAGACAATTGACTCAGAGAACTTCACGGTCCAGAACTCCATCCG
GTTTGCTGGGCCATTGGCTACAACTTCCATTAGTACCAATGCCAAGTGTG
AAGTGCGGAGCCCCAAGCGTGTGCAGATCAAGTTCGAGGAAGGTATCATT
GGGACGCCTCAGGTAACTGATTCACTATTGATAGCGGAAAATGTCGAATT
CTTGGGGACAAAGGATGATCTCTCGACCCTTCAAGGGCTTCTCTCTTCAG
GCCAAGAAACAGCTTCATCTGGTGCGAAAACCCTTCTTACCCAACCACCT
TGTAAGTTCTCTATCGTGTGNAGCAGTGCTCGTCATGGGTGGCGGACCAG
ATCCTTGGATGAGATCTTCGGAGGTCGAGGGGGGGA
back to top