EY735733

Overview
NameEY735733
Unique NameEY735733
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12310 contig Csv1_Contig12310:1..830. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: TMEDA_HUMAN (Transmembrane emp24 domain-containing protein 10 OS=Homo sapiens GN=TMED10 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.464e-18
Identity = 61/211 (28.91%), Postives = 106/211 (50.24%), Query Frame = 3
Query:  129 FPVFVAFYFTINAIVSDAIWLNLPATGTTCVSEEIQNHXXXXXXXXXXXXX------RSHIPTISVKVTSPYGNNLHIRENVTYGRFAFTTHEAGKYLTCLWVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHLNRXXXXXXLI 743
            FP+ +   F +   +  AI  +LP     C+ EEI                      RSH+     K+T   G+ L+ +E+ T G+FAFTT +   +  C    G   +   + + +D K G+ AK++E +A+ EKL+ +E+ELR+LE   E+I  +  Y+K +E  MR+ +E T++ + ++S+ S+   I ++   V++L R      LI
Sbjct:   14 FPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHL-----KITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVI-LDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: TMEDA_PONAB (Transmembrane emp24 domain-containing protein 10 OS=Pongo abelii GN=TMED10 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.262e-18
Identity = 60/211 (28.44%), Postives = 106/211 (50.24%), Query Frame = 3
Query:  129 FPVFVAFYFTINAIVSDAIWLNLPATGTTCVSEEIQNHXXXXXXXXXXXXX------RSHIPTISVKVTSPYGNNLHIRENVTYGRFAFTTHEAGKYLTCLWVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHLNRXXXXXXLI 743
            FP+ +   F +   +  AI  +LP     C+ EEI                      RSH+     K+T   G+ L+ +E+ T G+FAFTT +   +  C    G   +   + + +D K G+ AK++E +A+ EKL+ +E+ELR+LE   E+I  +  Y++ +E  MR+ +E T++ + ++S+ S+   I ++   V++L R      LI
Sbjct:   14 FPLALLLLFLLGPSLVLAISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHL-----KITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVI-LDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMEKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: TMEDA_RABIT (Transmembrane emp24 domain-containing protein 10 OS=Oryctolagus cuniculus GN=TMED10 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.240e-17
Identity = 59/210 (28.10%), Postives = 105/210 (50.00%), Query Frame = 3
Query:  132 PVFVAFYFTINAIVSDAIWLNLPATGTTCVSEEIQNHXXXXXXXXXXXXX------RSHIPTISVKVTSPYGNNLHIRENVTYGRFAFTTHEAGKYLTCLWVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHLNRXXXXXXLI 743
            P+ + F F +      AI  +LP     C+ EEI                      R+H+     K+T   G+ L+ +E+ + G+FAFTT +   +  C    G   +   + + +D K G+ AK++E +A+ EKL+ +E+ELR+LE   E+I  +  Y+K +E  MR+ +E T++ + ++S+ S+   I ++   V++L R      LI
Sbjct:   15 PLALLFLFLLGPSSVLAISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHL-----KITDSAGHILYSKEDASKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVI-LDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: TMEDA_MESAU (Transmembrane protein Tmp21 OS=Mesocricetus auratus GN=TMED10 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17
Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  180 AIWLNLPATGTTCVSEEIQNHXXXXXXXXXXXXX------RSHIPTISVKVTSPYGNNLHIRENVTYGRFAFTTHEAGKYLTCLWVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHLNRXXXXXXLI 743
            AI  +LP     C+ EEI                      R+H+     K+T   G+ L+ +E+ T G+FAFTT +   +  C    G   +   + + +D K G+ AK++E +A+ EKL+ +E+ELR+LE   E+I  +  Y+K +E  MR+ +E T++ + ++S+ S+   I ++   V++L R      LI
Sbjct:   31 AISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHL-----KITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVI-LDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMLCLIGLATWQVFYLRRFFKAKKLI 218          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: TMEDA_BOVIN (Transmembrane emp24 domain-containing protein 10 OS=Bos taurus GN=TMED10 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.761e-17
Identity = 57/194 (29.38%), Postives = 99/194 (51.03%), Query Frame = 3
Query:  180 AIWLNLPATGTTCVSEEIQNHXXXXXXXXXXXXX------RSHIPTISVKVTSPYGNNLHIRENVTYGRFAFTTHEAGKYLTCLWVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHLNRXXXXXXLI 743
            AI  +LP     C+ EEI                      R+H+     K+T   G+ L+ +E+ T G+FAFTT +   +  C    G   +   + + +D K G+ AK++E +A+ EKL+ +E+ELR+LE   E+I  +  Y+K +E  MR+ +E T++ + ++S+ S+   I ++   V++L R      LI
Sbjct:   31 AISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHL-----KITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVI-LDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: TMEDA_RAT (Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus GN=Tmed10 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 58/205 (28.29%), Postives = 101/205 (49.27%), Query Frame = 3
Query:  147 FYFTINAIVSDAIWLNLPATGTTCVSEEIQNHXXXXXXXXXXXXX------RSHIPTISVKVTSPYGNNLHIRENVTYGRFAFTTHEAGKYLTCLWVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHLNRXXXXXXLI 743
            F F +       I  +LP     C+ EEI                      R+H+     K+T   G+ L+ +E+ T G+FAFTT +   +  C    G   +   + + +D K G+ AK++E +A+ EKL+ +E+ELR+LE   E+I  +  Y+K +E  MR+ +E T++ + ++S+ S+   I ++   V++L R      LI
Sbjct:   20 FLFLLGPSSVLGISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHL-----KITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVI-LDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: TMEDA_MOUSE (Transmembrane emp24 domain-containing protein 10 OS=Mus musculus GN=Tmed10 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.152e-17
Identity = 56/193 (29.02%), Postives = 98/193 (50.78%), Query Frame = 3
Query:  183 IWLNLPATGTTCVSEEIQNHXXXXXXXXXXXXX------RSHIPTISVKVTSPYGNNLHIRENVTYGRFAFTTHEAGKYLTCLWVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHLNRXXXXXXLI 743
            I  +LP     C+ EEI                      R+H+     K+T   G+ L+ +E+ T G+FAFTT +   +  C    G   +   + + +D K G+ AK++E +A+ EKL+ +E+ELR+LE   E+I  +  Y+K +E  MR+ +E T++ + ++S+ S+   I ++   V++L R      LI
Sbjct:   32 ISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHL-----KITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVI-LDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 218          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: TMEDA_TAKRU (Transmembrane emp24 domain-containing protein 10 OS=Takifugu rubripes GN=tmed10 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.979e-15
Identity = 48/148 (32.43%), Postives = 84/148 (56.76%), Query Frame = 3
Query:  309 KVTSPYGNNLHIRENVTYGRFAFTTHEAGKYLTCLWVDGHNPVRGHVS---VPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHLNRXXXXXXLI 743
            K+T    + L+ +E+ T G+FAFTT +   +  C      +   G V    V +D K G+ AK++E +A+ EKL+ +E+ELR+LE   E+I  +  Y+K +E  MR+ +E T++ + ++S+ S+   I ++   V++L R      LI
Sbjct:   69 KITDSSSHTLYSKEDATKGKFAFTTEDYDMFEVCF----ESKCTGRVPDQLVNLDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLI 212          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: ERV25_CANAL (Endoplasmic reticulum vesicle protein 25 OS=Candida albicans GN=ERV25 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.520e-15
Identity = 61/205 (29.76%), Postives = 100/205 (48.78%), Query Frame = 3
Query:  138 FVAFYFTINAIVSDAIWLNL-----PATGTTCVSEEIQNHXXXXXXXXXXXXXRSHIPTISVKVTSPYGNNLHIRENVT-YGRFAFTT-HEAG------KYLTCLWVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHL 713
            ++A  F++   VS AI L+L     P     C+ + +Q +             +     + +KVT   GN    +++V  +   AFT+ H A        YL   W      VR   SV +D ++G AA+DW ++   EKL+ VE+EL+++E   E I E L YLK +E  MR+ +E T+S + W+S++ +   +   G  VW +
Sbjct:    7 YIALVFSL--FVSSAIGLHLEVPALPNPQPVCIRDFVQENQMVVVNIKTDGS-KGDGQRLDLKVTDSLGNEYRNKKDVVGHANVAFTSQHNAAIDICLTNYLDNKWSKHQQTVR---SVELDIESGAAARDWNALQASEKLKPVEVELKRIESITEEIVEELRYLKAREERMRDTNESTNSRVKWFSIVVIASLV---GFGVWQI 202          
BLAST of EY735733 vs. ExPASy Swiss-Prot
Match: ERV25_DEBHA (Endoplasmic reticulum vesicle protein 25 OS=Debaryomyces hansenii GN=ERV25 PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.016e-11
Identity = 41/146 (28.08%), Postives = 74/146 (50.68%), Query Frame = 3
Query:  300 ISVKVTSPYGNNLHIRENVTYG-RFAFTTHEAGKYLTCL-------WVDGHNPVRGHVSVPIDWKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEA*MREVSEKTHSTLAWYSLMSLGVCIVVSGVHVWHL 713
            + +++    GN    + ++    +  FT+H +  +  C        W    N VR    + +D ++G AA+DW +V   EKL+ VE++LR++E     I   L YLK +E  MR+ +E T+S + W+S++   V   + G+  W +
Sbjct:   62 LDLRIVDSLGNEYRRKNDIAGSVKIGFTSHNSAAFDICFTNQLERKWSKNTNFVR---EIELDVESGAAARDWNAVQAAEKLKPVEVDLRRIEETTYEISGELQYLKAREERMRDTNESTNSRVKWFSIL---VITSLVGLGAWQV 201          
The following BLAST results are available for this feature:
BLAST of EY735733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
TMEDA_HUMAN1.464e-1828.91Transmembrane emp24 domain-containing protein 10 O... [more]
TMEDA_PONAB3.262e-1828.44Transmembrane emp24 domain-containing protein 10 O... [more]
TMEDA_RABIT1.240e-1728.10Transmembrane emp24 domain-containing protein 10 O... [more]
TMEDA_MESAU2.761e-1729.38Transmembrane protein Tmp21 OS=Mesocricetus auratu... [more]
TMEDA_BOVIN2.761e-1729.38Transmembrane emp24 domain-containing protein 10 O... [more]
TMEDA_RAT4.710e-1728.29Transmembrane emp24 domain-containing protein 10 O... [more]
TMEDA_MOUSE6.152e-1729.02Transmembrane emp24 domain-containing protein 10 O... [more]
TMEDA_TAKRU1.979e-1532.43Transmembrane emp24 domain-containing protein 10 O... [more]
ERV25_CANAL7.520e-1529.76Endoplasmic reticulum vesicle protein 25 OS=Candid... [more]
ERV25_DEBHA1.016e-1128.08Endoplasmic reticulum vesicle protein 25 OS=Debary... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-C07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735733 ID=EY735733; Name=EY735733; organism=Citrus sinensis; type=EST; length=830bp
CACGCGTCCGCTTAATTGTTGTTGCATGATTAACAGATCGAAATCAAGGG
TGTTTGAGAAACCCGACGCAATCATTAACTCAGAATCCGGCCATGGCGAA
GATTGCTAACGTGCGCGGGGAGGTGTTGTTCCCTGTCTTCGTTGCCTTCT
ATTTCACGATTAACGCTATAGTGAGCGACGCCATATGGTTGAATCTACCG
GCGACGGGAACCACATGCGTGTCGGAGGAAATCCAGAACCACGTCGTCGT
TTTATCCGATTACCTTGTCGTGTCCGATGATCGCTCACATATCCCCACCA
TCTCCGTCAAGGTGACATCGCCATATGGGAACAATCTTCACATCAGGGAG
AATGTGACATATGGTCGGTTTGCTTTCACGACTCATGAAGCTGGCAAATA
TCTGACATGTCTATGGGTGGATGGCCATAATCCAGTACGTGGACATGTAA
GCGTCCCTATAGACTGGAAAACTGGAATTGCAGCTAAGGATTGGGAATCA
GTTGCAAGAAAAGAGAAACTTGAAGGCGTGGAGCTTGAACTGAGGAAACT
TGAAGGGGCAGTAGAGGCCATCCATGAGAATCTACTTTATCTCAAGACCA
AGGAAGCATAGATGAGGGAAGTAAGTGAAAAAACACATTCTACACTGGCA
TGGTACAGTCTCATGTCCTTGGGAGTCTGCATTGTGGTTTCAGGTGTGCA
CGTGTGGCACTTGAATCGATTCTTTCANAAGAAGAAACTTATCTAAATTC
ACTTCTAACATTATATTTCTTGGTGAAAGAGCAATGGTAGAACACTTTTT
TCCCCCCTTTTCTGAAGAAATGATACTGGT
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