EY735723

Overview
NameEY735723
Unique NameEY735723
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12308 contig Csv1_Contig12308:1..661. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODB2_HUMAN (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DBT PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 1.838e-41
Identity = 81/162 (50.00%), Postives = 112/162 (69.14%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQMR 498
            ++P +N+  +E    +  K SHNIGIAM T+ GL VPN+KNVQ  SI +I  EL+RLQ+L    +L+  D +GGT TLSNIG+IGG F  P++  PEVAI A+G I+ +PR +  G VY + IM V+  ADHRV+DGAT+++F N WK  +ENP  +LL ++
Sbjct:  321 QFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQICSIFDIATELNRLQKLGSVGQLSTTDLTGGTFTLSNIGSIGGTFAKPVIMPPEVAIGALGSIKAIPRFNQKGEVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLLDLK 482
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODB2_BOVIN (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Bos taurus GN=DBT PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 5.912e-40
Identity = 80/162 (49.38%), Postives = 111/162 (68.52%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQMR 498
            ++P +N+  +E    +  K SHNIGIAM T+ GL VPN+KNVQ  SI EI  EL+RLQ+L    +L+  D  GGT TLSNIG+IGG +  P++  PEVAI A+G I+ +PR ++ G V  + IM V+  ADHR++DGATV++F N WK  +ENP  +LL ++
Sbjct:  321 QFPILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLLDLK 482
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODB2_MOUSE (Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial OS=Mus musculus GN=Dbt PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.009e-39
Identity = 79/162 (48.77%), Postives = 110/162 (67.90%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQMR 498
            ++P +N+  +E    +  K SHNIGIAM T+ GL VPN+KNVQ  S+  I  EL+RLQ+L    +L   D +GGT TLSNIG+IGG +  P++  PEVAI A+G I+ +PR    G+VY + IM V+  ADHRV+DGAT+++F N WK  +ENP  +LL ++
Sbjct:  321 QFPILNASVDENCQNITYKASHNIGIAMDTELGLIVPNVKNVQVRSVFGIGMELNRLQKLGSSGQLGTTDLTGGTFTLSNIGSIGGTYAKPVILPPEVAIGALGAIKALPRFDQKGDVYKAQIMNVSWSADHRVIDGATMSRFSNLWKSYLENPAFMLLDLK 482
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODP2_STAES (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.740e-32
Identity = 70/160 (43.75%), Postives = 104/160 (65.00%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 492
            KYP +N+ FNEE+ EV+ K   NIGIA  T  GL VP +K+    SI EI+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  274 KYPALNTSFNEEAGEVVHKHYWNIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 432
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODP2_STAEQ (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 7.740e-32
Identity = 70/160 (43.75%), Postives = 104/160 (65.00%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 492
            KYP +N+ FNEE+ EV+ K   NIGIA  T  GL VP +K+    SI EI+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  274 KYPALNTSFNEEAGEVVHKHYWNIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 432
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODP2_STAAW (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MW2) GN=pdhC PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31
Identity = 68/160 (42.50%), Postives = 104/160 (65.00%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 492
            KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  271 KYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODP2_STAAU (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus GN=pdhC PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31
Identity = 68/160 (42.50%), Postives = 104/160 (65.00%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 492
            KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  271 KYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODP2_STAAS (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MSSA476) GN=pdhC PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31
Identity = 68/160 (42.50%), Postives = 104/160 (65.00%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 492
            KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  271 KYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODP2_STAAR (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain MRSA252) GN=pdhC PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31
Identity = 68/160 (42.50%), Postives = 104/160 (65.00%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 492
            KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  271 KYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429
[Close]
BLAST of EY735723 vs. ExPASy Swiss-Prot
Match: ODP2_STAAN (Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex OS=Staphylococcus aureus (strain N315) GN=pdhC PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31
Identity = 68/160 (42.50%), Postives = 104/160 (65.00%), Query Frame = 1 
Query:   13 KYPFMNSCFNEESLEVILKGSHNIGIAMATQHGLAVPNIKNVQSLSILEITKELSRLQQLAKDNELNPADNSGGTITLSNIGAIGGKFGAPLLNLPEVAIIAMGRIEKVPRLSDDGNVYPSPIMTVNIGADHRVLDGATVAKFCNEWKQLIENPELLLLQ 492
            KYP +N+ FNEE+ E++ K   NIGIA  T  GL VP +K+    SI +I+ E++ L   A+D +L   +  G T T+SNIG+ GG++  P++N PEVAI+ +GRI + P +  DG +  +P++ +++  DHR +DGAT     N  K+L+ NPELLL++
Sbjct:  271 KYPALNTSFNEEAGEIVHKHYWNIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIGSAGGQWFTPVINHPEVAILGIGRIAQKP-IVKDGEIVAAPVLALSLSFDHRQIDGATGQNAMNHIKRLLNNPELLLME 429
The following BLAST results are available for this feature:
BLAST of EY735723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
ODB2_HUMAN1.838e-4150.00Lipoamide acyltransferase component of branched-ch... [more]
ODB2_BOVIN5.912e-4049.38Lipoamide acyltransferase component of branched-ch... [more]
ODB2_MOUSE1.009e-3948.77Lipoamide acyltransferase component of branched-ch... [more]
ODP2_STAES7.740e-3243.75Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAEQ7.740e-3243.75Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAW2.252e-3142.50Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAU2.252e-3142.50Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAS2.252e-3142.50Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAR2.252e-3142.50Dihydrolipoyllysine-residue acetyltransferase comp... [more]
ODP2_STAAN2.252e-3142.50Dihydrolipoyllysine-residue acetyltransferase comp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-B07-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735723 ID=EY735723; Name=EY735723; organism=Citrus sinensis; type=EST; length=661bp
CACGCGTCCGGCAAATATCCCTTCATGAATAGTTGCTTCAATGAGGAGTC
ACTTGAGGTCATTCTTAAAGGTTCCCACAATATTGGAATTGCAATGGCTA
CTCAACATGGTCTAGCTGTACCTAACATTAAGAATGTTCAGTCCCTTTCC
ATCTTGGAGATAACAAAGGAACTGTCACGGTTACAACAATTAGCAAAGGA
TAACGAGCTTAATCCAGCTGATAATTCTGGTGGAACAATAACTCTCAGCA
ATATTGGAGCAATCGGCGGAAAATTTGGTGCGCCACTTCTCAACTTGCCT
GAAGTTGCCATCATTGCAATGGGCCGAATTGAGAAAGTTCCACGTCTTTC
AGACGATGGAAATGTGTACCCCTCACCAATTATGACCGTTAATATAGGTG
CTGATCACAGAGTTTTGGATGGAGCAACTGTCGCAAAGTTCTGCAATGAG
TGGAAACAGTTAATCGAAAACCCTGAGTTACTTCTGTTGCAAATGAGATG
ATGCATCTTCATTGCTCCTCAGCTTACACTTTTCAATAACTCTCAATTAC
ACGCAAAATAATAATATTATTGTATGTCACGATTCAGGAAAAAACTCAAT
GCTATGCCAGTAAAATTTGGATAACGCGATTTCTTGGCAAAAAAAAAAAA
AAAAAAAAAAA
back to top