EY735710

Overview
NameEY735710
Unique NameEY735710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y3980_PSESM (UPF0082 protein PSPTO_3980 OS=Pseudomonas syringae pv. tomato GN=PSPTO_3980 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.383e-18
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAKKGKIFTKWIRELT  ARQGG +PGSNP
Sbjct:    1 MAGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y3775_PSE14 (UPF0082 protein PSPPH_3775 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_3775 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.383e-18
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAKKGKIFTKWIRELT  ARQGG +PGSNP
Sbjct:    1 MAGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1407_PSEU2 (UPF0082 protein Psyr_1407 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_1407 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.383e-18
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAKKGKIFTKWIRELT  ARQGG +PGSNP
Sbjct:    1 MAGHSKWANIKHRKERQDAKKGKIFTKWIRELTVAARQGGGDPGSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y4410_PSEPF (UPF0082 protein Pfl01_4410 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_4410 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.199e-17
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAK+GKIFTKWIRELT  ARQGG +PGSNP
Sbjct:    1 MAGHSKWANIKHRKERQDAKRGKIFTKWIRELTVAARQGGGDPGSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y4766_PSEF5 (UPF0082 protein PFL_4766 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_4766 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 5.952e-17
Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAK+GKIFTKWIRELT  ARQGG +P SNP
Sbjct:    1 MAGHSKWANIKHRKERQDAKRGKIFTKWIRELTVAARQGGGDPNSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1214_PSEPK (UPF0082 protein PP_1214 OS=Pseudomonas putida (strain KT2440) GN=PP_1214 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16
Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAK+GK+FTKWIRELT  A+QGG +P SNP
Sbjct:    1 MAGHSKWANIKHRKERQDAKRGKVFTKWIRELTVAAKQGGPDPASNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y964_PSEAE (UPF0082 protein PA0964 OS=Pseudomonas aeruginosa GN=PA0964 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAKKGKIFTK IRELT  ARQGG  P  NP
Sbjct:    1 MAGHSKWANIKHRKERQDAKKGKIFTKLIRELTVAARQGGGVPADNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y5181_PSEAB (UPF0082 protein PA14_51810 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=PA14_51810 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAKKGKIFTK IRELT  ARQGG  P  NP
Sbjct:    1 MAGHSKWANIKHRKERQDAKKGKIFTKLIRELTVAARQGGGVPADNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y4350_PSEA8 (UPF0082 protein PLES_43501 OS=Pseudomonas aeruginosa (strain LESB58) GN=PLES_43501 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 38/47 (80.85%), Postives = 39/47 (82.98%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAKKGKIFTK IRELT  ARQGG  P  NP
Sbjct:    1 MAGHSKWANIKHRKERQDAKKGKIFTKLIRELTVAARQGGGVPADNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y4544_PSEA7 (UPF0082 protein PSPA7_4544 OS=Pseudomonas aeruginosa (strain PA7) GN=PSPA7_4544 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.621e-14
Identity = 37/47 (78.72%), Postives = 39/47 (82.98%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK+RQDAKKGKIFTK IRELT  A+QGG  P  NP
Sbjct:    1 MAGHSKWANIKHRKERQDAKKGKIFTKLIRELTVAAKQGGGVPADNP 47          
The following BLAST results are available for this feature:
BLAST of EY735710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
Y3980_PSESM5.383e-1887.23UPF0082 protein PSPTO_3980 OS=Pseudomonas syringae... [more]
Y3775_PSE145.383e-1887.23UPF0082 protein PSPPH_3775 OS=Pseudomonas syringae... [more]
Y1407_PSEU25.383e-1887.23UPF0082 protein Psyr_1407 OS=Pseudomonas syringae ... [more]
Y4410_PSEPF1.199e-1785.11UPF0082 protein Pfl01_4410 OS=Pseudomonas fluoresc... [more]
Y4766_PSEF55.952e-1782.98UPF0082 protein PFL_4766 OS=Pseudomonas fluorescen... [more]
Y1214_PSEPK1.732e-1678.72UPF0082 protein PP_1214 OS=Pseudomonas putida (str... [more]
Y964_PSEAE7.276e-1580.85UPF0082 protein PA0964 OS=Pseudomonas aeruginosa G... [more]
Y5181_PSEAB7.276e-1580.85UPF0082 protein PA14_51810 OS=Pseudomonas aerugino... [more]
Y4350_PSEA87.276e-1580.85UPF0082 protein PLES_43501 OS=Pseudomonas aerugino... [more]
Y4544_PSEA71.621e-1478.72UPF0082 protein PSPA7_4544 OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-A05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735710 ID=EY735710; Name=EY735710; organism=Citrus sinensis; type=EST; length=482bp
CAAAGTGCTGCCGACGTCATGACGCAAGCACCGGGTGTGGTGGATGCCAA
TGCACTGCGCAAGCTGCATATCCGTCTGAGCGAGACACGAAAGGCTGAGT
AAGGCCGCAGCGTGAAAGCGCGATAAGGTTTTACATTGTCAGCTAAGGGC
GCATCTTCGGATGCGCCTTTGCGTGACAAGGGCTGCACGTTAGAGAGGGA
ANTCCCGCCTGGGGCGGGATCGACAGGTTTCTACAGAATTTCAGAGTTGT
GTTATGGCTGGCCATTCCAAGTGGGCGAACATCGACCACCGCAAAAAGCG
TCAGGATGCCAAGAAAGGCAAGATCTTCACCAAGTGGATTCGCGAGCTGA
CCCGCNCTGCGCGCCAAGGTGGGCGTGAACCGGGTTCCAACCCCGCGTCT
GCGCCTGGACCCTGGAACAGGGCCTCGGCCGCCACATGAACCCCCAAATC
ATCGAACGGCCCGTGGCCCGTGTTGCCGGGGG
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