EY735656

Overview
NameEY735656
Unique NameEY735656
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.259e-28
Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEKTH +IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 4.259e-28
Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEKTH +IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.259e-28
Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEKTH +IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEK H +IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETSKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEK H +IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A2_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare GN=BLT63 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.618e-27
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEK H  IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  ++   ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIESFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYSCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEK H +IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27
Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEK H  IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEK H +IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDSTTGGFEAGISKDG 131
[Close]
BLAST of EY735656 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.761e-27
Identity = 65/132 (49.24%), Postives = 84/132 (63.64%), Query Frame = 2 
Query:   77 MGKEKTHXHIVVIGHVDSGKSTTTGHLIXQLGGIDXRVIEXVEKEAAEMNRRSFXYPWVLHSLRLTVNLGFPLNLAC*NSKTPSFTGPALNAPGNPEFFRKLYPGSPQGGWGPPLSWTLPPGGLKTGVSRGG 472
            MGKEK H +IVVIGHVDSGKSTTTGHLI +LGGID RVIE  EKEAAEMN+RSF Y WVL  L+     G  +++A    +T  +    ++APG+ +F + +  G+ Q      L      GG + G+S+ G
Sbjct:    1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCA-VLIIDPTTGGFEAGISKDG 131
The following BLAST results are available for this feature:
BLAST of EY735656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
EF1A_WHEAT4.259e-2850.00Elongation factor 1-alpha OS=Triticum aestivum GN=... [more]
EF1A_ORYSJ4.259e-2850.00Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A_MAIZE4.259e-2850.00Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3... [more]
EF1A_VICFA1.618e-2749.24Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1[more]
EF1A_MANES1.618e-2749.24Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]
EF1A2_HORVU1.618e-2749.24Elongation factor 1-alpha OS=Hordeum vulgare GN=BL... [more]
EF1A_TOBAC2.761e-2749.24Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_SOYBN2.761e-2749.24Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A_ARATH2.761e-2749.24Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A1_DAUCA2.761e-2749.24Elongation factor 1-alpha OS=Daucus carota PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-D01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735656 ID=EY735656; Name=EY735656; organism=Citrus sinensis; type=EST; length=800bp
CACGCGTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGAATATCATTTT
AATAAGGTTTTTTCTAGATTTGCATAATGGGTAAGGAGAAGACTCACATN
CACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGG
ACACTTGATCTANCAGCTTGGTGGTATTGACANGCGTGTGATCGAGANGG
TCGAGAAGGAAGCTGCTGAGATGAACAGGAGGTCATTCAANTACCCCTGG
GTGCTCCACAGCCTCAGGCTGACCGTGAACCTTGGATTCCCATTGAATTT
GGCCTGTTGAAATTCCAAAACCCCCAGTTTTACTGGCCCCGCCCTTAATG
CCCCCGGAAATCCTGAATTTTTCAGAAAACTATATCCCGGTTCCCCCCAG
GGGGGATGGGGGCCCCCCTTATCTTGGACCCTCCCCCCCGGGGGTTTGAA
AACGGGGGTTTCCCGGGGGGGGGGGAAACCCGGGACCCTTCTTTTTGTTC
TTTGCCCCCGGGGGTGGAGGACAAAATTGGGGGCGGGGGTCAAAGGGGGG
GGCCCCCCCCCCCCCGGGTGCTCCGGGGGGGGGTGGGGAGAGAGGTCGTT
GGGGGGGGGGTTTTCTGCCGCCGGAAAAGGGGGGGGGGGCTTCTCCGCGG
CGGATGTCGGGCTCTCCCCCCTCCTCGGGTGGGGGGGGGGGGGGGGGAGG
GGGGGGAGGGGGGGCGGGGGGCCCGGCGAGGGGGGGGAGGGCGGGCGGCC
CACCCCTCGGTGCGTTCGCCCCCTCGCGGGGGGGGGGGGGGGGGGGGGGG
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