EY735620

Overview
NameEY735620
Unique NameEY735620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8689 contig Csv1_Contig8689:217..1066. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: HAL3A_ARATH (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3A PE=1 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 3.283e-88
Identity = 141/173 (81.50%), Postives = 158/173 (91.33%), Query Frame = 1
Query:  232 DWEAMQVNTGLRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHSYVIDELGISLIPPVSKRLACGDYG 750
            D + M+VNT  RKPR+LLAASGSVAAIKFGNLCHCF+EWAEVRAV TKSSLHF+D+ +LP++V  YTDEDEW++WNKIGD VLHIELRRWAD++VIAPLSANTLGKIAGGLCDNLLTCI+RAWDY KPLFVAPAMNT MWNNPFTERH   +DELGI+LIPP+ KRLACGDYG
Sbjct:    7 DRQDMEVNTTPRKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSLHFLDKLSLPQEVTLYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKRLACGDYG 179          

HSP 2 Score: 38.5058 bits (88), Expect = 3.283e-88
Identity = 19/21 (90.48%), Postives = 19/21 (90.48%), Query Frame = 2
Query:  749 GNGAMAETSLIYSTVRLFAES 811
            GNGAMAE SLIYSTVRLF ES
Sbjct:  179 GNGAMAEPSLIYSTVRLFWES 199          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: HAL3B_ARATH (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3B PE=2 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 1.935e-85
Identity = 136/169 (80.47%), Postives = 157/169 (92.90%), Query Frame = 1
Query:  244 MQVNTGLRKPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHSYVIDELGISLIPPVSKRLACGDYG 750
            M+V+T  RKPRILLAASGSVA+IKF NLCHCFSEWAEV+AVA+KSSL+F+D+ +LP++V  YTDEDEW++WNKIGD VLHIELRRWAD+M+IAPLSANTL KIAGGLCDNLLTCIVRAWDY+KPLFVAPAMNT MWNNPFTERH  ++DELGI+LIPP+ K+LACGDYG
Sbjct:    3 MEVDTVTRKPRILLAASGSVASIKFSNLCHCFSEWAEVKAVASKSSLNFVDKPSLPQNVTLYTDEDEWSSWNKIGDPVLHIELRRWADVMIIAPLSANTLAKIAGGLCDNLLTCIVRAWDYSKPLFVAPAMNTLMWNNPFTERHLVLLDELGITLIPPIKKKLACGDYG 171          

HSP 2 Score: 38.5058 bits (88), Expect = 1.935e-85
Identity = 19/21 (90.48%), Postives = 19/21 (90.48%), Query Frame = 2
Query:  749 GNGAMAETSLIYSTVRLFAES 811
            GNGAMAE SLIYSTVRLF ES
Sbjct:  171 GNGAMAEPSLIYSTVRLFWES 191          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: COAC_MOUSE (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus GN=Ppcdc PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.406e-40
Identity = 83/164 (50.61%), Postives = 105/164 (64.02%), Query Frame = 1
Query:  265 RKPRILLAASGSVAAIKFGNLCHCFSE--WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHSYVIDELGISLIPPVSKRLACGDYG 750
            RK R+L+  +GSVAA+K   L     +    EV  V T+ + HF     +P  V  Y+D DEW  W +  D VLHI+LRRWAD+M++APL ANTLGK+A G+CDNLLTC++RAWD NKPL   PAMNT MW +P T +    +   G   IP VSK+L CGD G
Sbjct:   16 RKFRVLVGVTGSVAALKLPLLVSKLLDVPGLEVTVVTTERAKHFYSPQDVP--VTLYSDADEWEMWKRRSDPVLHIDLRRWADLMLVAPLDANTLGKVASGICDNLLTCVIRAWDLNKPLLFCPAMNTAMWEHPLTAQQVAQLKAFGYVEIPCVSKKLVCGDQG 177          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: COAC_HUMAN (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38
Identity = 79/164 (48.17%), Postives = 103/164 (62.80%), Query Frame = 1
Query:  265 RKPRILLAASGSVAAIKFGNLCHCFSE--WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHSYVIDELGISLIPPVSKRLACGDYG 750
            RK  +L+  +GSVAA+K   L     +    EV  V T+ + HF     +P  V  Y+D DEW  W    D VLHI+LRRWAD++++APL ANTLGK+A G+CDNLLTC++RAWD +KPL   PAMNT MW +P T +    +   G   IP V+K+L CGD G
Sbjct:   16 RKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIP--VTLYSDADEWEMWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEG 177          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: TYSY_SCHPO (Probable thymidylate synthase OS=Schizosaccharomyces pombe GN=SPAC15E1.04 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.274e-33
Identity = 75/166 (45.18%), Postives = 103/166 (62.05%), Query Frame = 1
Query:  268 KPRILLAASGSVAAIKFGNLCHCFSEW--AEVRAVATKSSLHFIDRAALPK-DVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHSYVIDEL--GISLIPPVSKRLACGDYG 750
            K  IL+AA+GSVAAIK   +      +   +V+ V T  + +F+++  L    V  Y + D+W  W+ +   + HIELRRWA +++IAPLSANT+ K+A GLCDNLLT ++RAW   KP+ +APAMNT MW NP T+ H   I  +      I P+ K LACGD G
Sbjct:   30 KYHILVAATGSVAAIKLTLIVKSLLTYKGVDVQVVLTDPARNFVEKEDLTALGVNVYNNADDWKNWDGLECPITHIELRRWAHLLLIAPLSANTMAKMANGLCDNLLTSLIRAWAPLKPILLAPAMNTLMWTNPITQEHLSAISRIYKNSEFIMPIEKVLACGDIG 195          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: COAC_DICDI (Putative phosphopantothenoylcysteine decarboxylase OS=Dictyostelium discoideum GN=ppcdc PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.260e-33
Identity = 73/167 (43.71%), Postives = 103/167 (61.68%), Query Frame = 1
Query:  268 KPRILLAASGSVAAIKFGNLCHCFSEWAEVRAVATKSSLHFI---DRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDY-NKPLFVAPAMNTFMWNNPFTERHSYVIDEL--GISLIPPVSKRLACGDYG 750
            K  ++L  +GSVA IK   L     +   +  + T++SL F+   D   +      Y D+DEW   + +  S LHI+LR WA+ ++I+P SANTLGKI+ GLCDNLLT ++RAWDY NK + +APAMNT MW NPFT +H   +  +   + +I P+ K+L CGD G
Sbjct:   12 KKNLILGLTGSVATIKAKLLVEQLIQHFNLIVIPTETSLKFLSDQDFEFISSKCKIYKDKDEWENVDLLKRSALHIDLRNWANSILISPCSANTLGKISNGLCDNLLTSLIRAWDYKNKSMILAPAMNTMMWENPFTFKHIETLKSISPNVFIIDPIEKKLFCGDIG 178          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: YKI8_YEAST (Uncharacterized protein YKL088W OS=Saccharomyces cerevisiae GN=YKL088W PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.451e-29
Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 1
Query:  265 RKPRILLAASGSVAAIK----FGNLCHCFS-EWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWA--TWNKIGDS-----VLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERH--SYVIDELGISLIPPVSKRLACGDYG 750
            +K  IL+ A+GSVA IK       L   +  E   ++ + TK + HF+    +   V  + +ED W     NK   S     +LH ELR+WADI +IAPLSANTL K+A G+C+NLLT ++R W    P+ +APAMNTFM+ NP T++H  S V D   I ++ PV K L CGD G
Sbjct:  307 KKFHILIGATGSVATIKVPLIIDKLFKIYGPEKISIQLIVTKPAEHFLKGLKMSTHVKIWREEDAWVFDAVNKNDTSLSLNLILHHELRKWADIFLIAPLSANTLAKLANGICNNLLTSVMRDWSPLTPVLIAPAMNTFMYINPMTKKHLTSLVQDYPFIQVLKPVEKVLICGDIG 482          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: VHS3_YEAST (Protein VHS3 OS=Saccharomyces cerevisiae GN=VHS3 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.846e-27
Identity = 54/96 (56.25%), Postives = 73/96 (76.04%), Query Frame = 1
Query:  406 LPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHSYVIDE 693
            LP  + F+TD+DEW  W +  D VLHIELRRWADI+V+APL+ANTL KIA GLCDNLLT ++RAW+   P+F+AP+M +  +N+  T++H  +I E
Sbjct:  434 LPAHIQFWTDQDEWDVWRQRTDPVLHIELRRWADILVVAPLTANTLAKIALGLCDNLLTSVIRAWNPTFPIFLAPSMGSGTFNSIMTKKHFRIIQE 529          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: SIS2_CANTR (Protein SIS2 OS=Candida tropicalis GN=SIS2 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.845e-24
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 1
Query:  340 SEWAEVRAVATKSSLHFIDRAALP-----KDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHSYVI--DELGISLIPPVSKRLACGDYG 750
            S+   ++ + TKSS +F+    L      K V  +TD DEW TW    D VLHIELRRWADI+++ PL+ANTL KI+ G+CDNLLT ++RAW+ + P+ +APAM++  +++  T+R   +I  D   I ++ P+ K    G YG
Sbjct:  296 SDKISIQVILTKSSENFLLPETLNVLENVKKVRVWTDIDEWTTWKTRLDPVLHIELRRWADILLVCPLTANTLAKISLGICDNLLTNVIRAWNSSYPILLAPAMDSHSYSSSTTKRQLRLIADDMPWIEVLKPLEK--VFGSYG 437          
BLAST of EY735620 vs. ExPASy Swiss-Prot
Match: SIS2_YEAST (Protein SIS2 OS=Saccharomyces cerevisiae GN=SIS2 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.146e-24
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 1
Query:  406 LPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHSYVIDE 693
            LP  +  +TD+DEW  W +  D VLHIELRRWADI+V+APL+ANTL KIA GLCDNLLT ++RAW+ + P+ +AP+M +  +N+  T++    I E
Sbjct:  353 LPPHIQLWTDQDEWDAWKQRTDPVLHIELRRWADILVVAPLTANTLSKIALGLCDNLLTSVIRAWNPSYPILLAPSMVSSTFNSMMTKKQLQTIKE 448          
The following BLAST results are available for this feature:
BLAST of EY735620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
HAL3A_ARATH3.283e-8881.50Phosphopantothenoylcysteine decarboxylase OS=Arabi... [more]
HAL3B_ARATH1.935e-8580.47Probable phosphopantothenoylcysteine decarboxylase... [more]
COAC_MOUSE1.406e-4050.61Phosphopantothenoylcysteine decarboxylase OS=Mus m... [more]
COAC_HUMAN5.000e-3848.17Phosphopantothenoylcysteine decarboxylase OS=Homo ... [more]
TYSY_SCHPO1.274e-3345.18Probable thymidylate synthase OS=Schizosaccharomyc... [more]
COAC_DICDI8.260e-3343.71Putative phosphopantothenoylcysteine decarboxylase... [more]
YKI8_YEAST9.451e-2943.18Uncharacterized protein YKL088W OS=Saccharomyces c... [more]
VHS3_YEAST8.846e-2756.25Protein VHS3 OS=Saccharomyces cerevisiae GN=VHS3 P... [more]
SIS2_CANTR1.845e-2443.06Protein SIS2 OS=Candida tropicalis GN=SIS2 PE=3 SV... [more]
SIS2_YEAST3.146e-2453.13Protein SIS2 OS=Saccharomyces cerevisiae GN=SIS2 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-H05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735620 ID=EY735620; Name=EY735620; organism=Citrus sinensis; type=EST; length=850bp
CACGCGTCCGGCTTTGTTTGTCAACGTCGCGGCTGCCGCTCTCTATTTAA
AACCCCCCTCGCACTCTCTCTACTCTCTAGGTCTAGGCTGCCTCCAAGCC
AGCGACCGTTAGTCGTCGGTTTCCACACTCCGACGCTGCGACGTCGATTG
TTGTCTCCCCTCCGCCACGCCACTCGTGGATTGCTGTTCTACCACCGCCG
GCCGCGGCTGATCTGATTCATCTCATCTCATGATTGGGAGGCGATGCAGG
TCAATACTGGTCTGAGGAAACCCCGTATTTTACTTGCTGCAAGTGGAAGT
GTAGCTGCAATAAAATTTGGGAATCTCTGTCATTGTTTTTCTGAGTGGGC
GGAAGTAAGAGCGGTGGCCACAAAGTCCTCTCTACACTTCATTGATAGAG
CAGCGCTTCCTAAGGATGTGATCTTTTACACAGACGAGGATGAATGGGCC
ACCTGGAACAAAATAGGTGATAGCGTTCTTCACATCGAGCTCCGCAGATG
GGCTGATATTATGGTTATTGCTCCGCTGTCAGCAAACACACTTGGCAAGA
TTGCAGGTGGATTGTGTGACAATCTGCTGACATGCATTGTGCGGGCATGG
GACTACAATAAGCCACTGTTTGTTGCACCTGCTATGAACACTTTCATGTG
GAATAATCCATTCACAGAGCGGCATTCTTATGTCATTGATGAGCTTGGAA
TTTCTCTCATTCCACCTGTCTCCAAAAGGCTGGCTTGCGGAGATTATGGG
TAATGGTGCCATGGCTGAAACTTCATTGATCTACTCGACTGTGAGACTGT
TCGCAGAGTCAGGGAACAGTCAGGCGATGGAAAAGTTGGTTATTCAGTCC
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