EY735615

Overview
NameEY735615
Unique NameEY735615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length867
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12300 contig Csv1_Contig12300:1..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY735615 vs. ExPASy Swiss-Prot
Match: BOR1_ARATH (Boron transporter 1 OS=Arabidopsis thaliana GN=BOR1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 3 
Query:  678 QLLRNKLVSTARKSLQRNSDLSQMYRNMQEAYDEMQTPLV*SMPPALGLKEMKES 842
            QLLRN+LV+TAR+S++ N+ L Q+Y NMQEAY  MQTPLV   P   GLKE+KES
Sbjct:  374 QLLRNRLVATARRSIKTNASLGQLYDNMQEAYHHMQTPLVYQQPQ--GLKELKES 426
[Close]
BLAST of EY735615 vs. ExPASy Swiss-Prot
Match: BOR2_ARATH (Putative boron transporter 2 OS=Arabidopsis thaliana GN=At3g62270 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 3 
Query:  678 QLLRNKLVSTARKSLQRNSDLSQMYRNMQEAYDEMQTPLV*SMPPALGLKEMKES 842
            QLLRN+LV+TARKS+++N+ L Q+Y NMQ+ Y++MQTPLV   P   GLKE++ES
Sbjct:  374 QLLRNRLVATARKSIKQNASLGQLYGNMQDVYNQMQTPLVYQQPQ--GLKELRES 426
The following BLAST results are available for this feature:
BLAST of EY735615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
BOR1_ARATH5.366e-1163.64Boron transporter 1 OS=Arabidopsis thaliana GN=BOR... [more]
BOR2_ARATH7.008e-1160.00Putative boron transporter 2 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-G11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735615 ID=EY735615; Name=EY735615; organism=Citrus sinensis; type=EST; length=867bp
CCACGCGTCCGCGGACGCGTGGGTGCATACAAAAAGCTTGGCTACCCTGA
AACATCAGGTAATTGTCTTGGTTTTTCAAATCGCAAATCTGGTTTGTATA
CCAGCATAGTTCTATCAACTTTTTATTCTCAACTTTCTTGATGTATAGAA
CACAGCTTGCCATTTATTACTTTTTGAATTGGAATATAATACTCACATTG
ATGCTGCAATTACTGGTGCACAAACAGGAATGAGGTCCAACATTTTGACA
AATTCTTACAATGGTGGAGCGTAGAGATGTGTAACTTAATGAGCCCAACT
TTTTTTTATTCAGATTTCTTATATCATTCGATAAGTTGTTATAGACTTTC
AAAACTATATCTGAACCTACTACTCTCATGGCAATTTACTACCTGATCCA
AGGGCTTTAACAGTTGGCCTATGGTGCTTATACATATTCAGTCGCCTTGC
TTATATTGCTGCCTTCTGCATAACAAGATTGCAGCTTTGTCCCATATTTC
CGTTTCCATTTGAGTATGCTCTTCCTGTTGCAACAAATTCTTGATTGTGT
ATTAGATATTAAAGTTAGTGTCATCTGTGCTTCTTGATCATGTTTTAGAT
ATTAAAGTTAGTGTCATCTGAGTTTCTACTGCTTTGAAAACTAAATTGCT
GCTACGGAATCTTGCTTTTCTTTGTAACAGCTTTTGCGGAATAAGCTTGT
ATCAACAGCACGGAAAAGCTTACAGAGAAATTCAGATCTGAGTCAAATGT
ACAGGAACATGCAAGAGGCATACGATGAAATGCAGACGCCCCTTGTCTAG
TCAATGCCTCCTGCTCTGGGACTGAAAGAGATGAAAGAATCCCAATCGAA
CTGGCCTCAANTTCTGG
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