EY735597

Overview
NameEY735597
Unique NameEY735597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length581
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9803 contig Csv1_Contig9803:1064..1624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.191e-42
Identity = 84/89 (94.38%), Postives = 87/89 (97.75%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            PNPNEESR DILKIHSR+MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR+HVTQEDFEMAVA VMKK+TEKNMSLRKLWK
Sbjct:  331 PNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.191e-42
Identity = 84/89 (94.38%), Postives = 87/89 (97.75%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            PNPNEESR DILKIHSR+MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR+HVTQEDFEMAVA VMKK+TEKNMSLRKLWK
Sbjct:  331 PNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.620e-37
Identity = 74/98 (75.51%), Postives = 87/98 (88.78%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWKXSFPCAVLC 326
            P PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVA VM+K++EKNMS++KLWK  F   +LC
Sbjct:  312 PPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWKCFFLVPILC 409          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 8.917e-36
Identity = 70/89 (78.65%), Postives = 83/89 (93.26%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            PNP +  RLDILKIHSR+MNL RGI+LKKI++KMNGASGAELKAVCTEAGM+ALRERR+HV+QEDFEMAV+ VMKK++E+NMS+ KLWK
Sbjct:  315 PNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKKDSEQNMSINKLWK 403          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.521e-35
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            P PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVA VM+K++EKNMS++KLWK
Sbjct:  318 PPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.521e-35
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            P PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVA VM+K++EKNMS++KLWK
Sbjct:  318 PPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.521e-35
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            P PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVA VM+K++EKNMS++KLWK
Sbjct:  318 PPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.521e-35
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            P PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVA VM+K++EKNMS++KLWK
Sbjct:  314 PPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 402          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.521e-35
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            P PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVA VM+K++EKNMS++KLWK
Sbjct:  318 PPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406          
BLAST of EY735597 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.521e-35
Identity = 71/89 (79.78%), Postives = 83/89 (93.26%), Query Frame = 3
Query:   33 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVANVMKKETEKNMSLRKLWK 299
            P PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALRERR+HVTQEDFEMAVA VM+K++EKNMS++KLWK
Sbjct:  317 PPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 405          
The following BLAST results are available for this feature:
BLAST of EY735597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
PRS8B_ARATH2.191e-4294.3826S protease regulatory subunit 8 homolog B OS=Ara... [more]
PRS8A_ARATH2.191e-4294.3826S protease regulatory subunit 8 homolog A OS=Ara... [more]
PRS8_XENLA3.620e-3775.5126S protease regulatory subunit 8 OS=Xenopus laevi... [more]
PRS8_DICDI8.917e-3678.6526S protease regulatory subunit 8 OS=Dictyostelium... [more]
PRS8_RAT1.521e-3579.7826S protease regulatory subunit 8 OS=Rattus norveg... [more]
PRS8_PIG1.521e-3579.7826S protease regulatory subunit 8 OS=Sus scrofa GN... [more]
PRS8_MOUSE1.521e-3579.7826S protease regulatory subunit 8 OS=Mus musculus ... [more]
PRS8_MANSE1.521e-3579.7826S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_HUMAN1.521e-3579.7826S protease regulatory subunit 8 OS=Homo sapiens ... [more]
PRS8_DROME1.521e-3579.7826S protease regulatory subunit 8 OS=Drosophila me... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-F03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735597 ID=EY735597; Name=EY735597; organism=Citrus sinensis; type=EST; length=581bp
CACGCGTCCGCGAATTGACAGAAAGATTGATTCCAAATCCTAATGAAGAG
TCTCGTCTTGATATCCTAAAAATTCATTCAAGAAGAATGAATTTAATGCG
TGGCATTGATTTGAAGAAGATTGCCGAGAAGATGAATGGTGCATCTGGTG
CGGAGCTTAAGGCTGTGTGCACAGAAGCCGGTATGTTTGCTCTAAGAGAG
AGAAGGATCCATGTAACACAGGAAGATTTTGAGATGGCAGTGGCCAATGT
CATGAAGAAAGAAACAGAGAAGAACATGTCCTTGCGGAAGTTGTGGAAGN
TATCATTTCCATGTGCTGTGCTGTGTATTTGCTTANTTTCTGAGCAAGAT
TCANGTAGTCCCTTACGGCACTCACTCGTGTTCTGGGACATTTGCACGAT
AGGCCCTTTTAGCCTGACTGTTGTCTTTTCTTGCGCTCTAGCCTCCTAAT
GATAAACAAATTTGGCATCTATTTTATCTAAATTTAAATTCGCATGCAAT
TCTGGGAAACCTCAGTACCTCACTAAAATATGGAAAAGCCCGTCTGTGTC
TTGNTAGCAGCGGTACTATCATCGGTTTCCT
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