EY735586

Overview
NameEY735586
Unique NameEY735586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_RANAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ranunculus acris GN=GAPC PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.996e-19
Identity = 42/50 (84.00%), Postives = 48/50 (96.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            F+GD+RSSIFDAKAGIAL+  CVKLVSWYDN+WGYS+RVVDLIVHM+KTQ
Sbjct:  289 FIGDNRSSIFDAKAGIALNDNCVKLVSWYDNEWGYSSRVVDLIVHMSKTQ 338          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_ANTMA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.883e-18
Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            FVGDSRSSIFDAKAGIAL+   VKLVSWYDN+WGYSTRVVDLIVHMA  Q
Sbjct:  288 FVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIVHMASVQ 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.917e-18
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            F+GDSRSSIFDA+AGIALS   VKLVSWYDN+WGYS+RVVDLIVHMA TQ
Sbjct:  291 FIGDSRSSIFDAQAGIALSDNFVKLVSWYDNEWGYSSRVVDLIVHMAATQ 340          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.917e-18
Identity = 42/48 (87.50%), Postives = 46/48 (95.83%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            FVGD+RSSIFDAKAGIALS K VKLVSWYDN+WGYS+RVVDLIVHM+K
Sbjct:  290 FVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHMSK 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18
Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            FVGDSRSSIFDAKAGIAL+   VKLVSWYDN+WGYS RVVDLI HMAKTQ
Sbjct:  288 FVGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMAKTQ 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.388e-18
Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAK 145
            FVGD+RSSIFDAKAGIALS   VKLVSWYDN+WGYSTRVVDLI+HM+K
Sbjct:  290 FVGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSTRVVDLIIHMSK 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.431e-17
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMA 142
            FVGDSRSSIFDAKAGIALSK  VKLVSWYDN+WGYS+RV+DLI HMA
Sbjct:  277 FVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLICHMA 323          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.431e-17
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            FVGDSRSSIFDAKAGIAL+   VKLV+WYDN+WGYS RV+DLI HMAKTQ
Sbjct:  288 FVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.431e-17
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKTQ 151
            FVGDSRSSIFDAKAGIAL+   VKLV+WYDN+WGYS RV+DLI HMAKTQ
Sbjct:  288 FVGDSRSSIFDAKAGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337          
BLAST of EY735586 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.431e-17
Identity = 40/49 (81.63%), Postives = 45/49 (91.84%), Query Frame = 2
Query:    2 FVGDSRSSIFDAKAGIALSKKCVKLVSWYDNDWGYSTRVVDLIVHMAKT 148
            F+GD+RSSIFDAKAGIALS   VKLVSWYDN+WGYS+RV+DLIVHMA T
Sbjct:  291 FIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDLIVHMAST 339          
The following BLAST results are available for this feature:
BLAST of EY735586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
G3PC_RANAC1.996e-1984.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ANTMA2.883e-1886.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PINSY4.917e-1884.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ARATH4.917e-1887.50Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PX_HORVU6.422e-1886.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_SINAL8.388e-1885.42Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TOBAC1.431e-1787.23Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSJ1.431e-1782.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSI1.431e-1782.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GINBI1.431e-1781.63Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-E02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735586 ID=EY735586; Name=EY735586; organism=Citrus sinensis; type=EST; length=377bp
CTTTGTTGGTGACAGTAGGTCAAGTATCTTTGATGCCAAGGCTGGTATTG
CTTTGAGTAAGAAATGTGTGAAGCTTGTCTCATGGTATGACAATGATTGG
GGCTACAGTACTCGTGTGGTGGATTTGATTGTCCACATGGCGAAGACCCA
GTAACTTACTCGGCGTGGCTTGAGTATGTAACACGCTTAGTAGTGCTAAC
TGGGGGGTTCCTTGGCCCGAAGATGGGGCGTCGGTGTTCCATGGAAAAGG
GTCGAAGTCTAAACTAAATGTGTCCGGAAACATTTCAGGAGCTGTACGTG
TGCTGCGGGGTTGTCCGTGAATATGCCCTTCCAGTTTGGTGAGACAGTGG
GGCGGCCACGCCGAGGGGAGCGACGGA
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