EY735581

Overview
NameEY735581
Unique NameEY735581
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: COX12_SCHPO (Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe GN=cox12 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 3
Query:  372 DQEASEETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            +QE  E   +    T   D RFP TNQT+HCF  YI+Y RC+ AKGE    C +F   Y++LCP +W+E W+EQRENGTFP P+
Sbjct:    3 EQEDQEAPKQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWVERWDEQRENGTFPAPI 86          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: COX12_YEAST (Cytochrome c oxidase subunit 6B OS=Saccharomyces cerevisiae GN=COX12 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.341e-17
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 3
Query:  408 LETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            L T   D RFP  NQT+HC+  Y++YH+CV  KGE    C  F K Y ALCP DWIE W++QRE G F G +
Sbjct:    9 LHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWDDQREKGIFAGDI 80          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: CX6B1_PONAB (Cytochrome c oxidase subunit 6B1 OS=Pongo abelii GN=COX6B1 PE=3 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.415e-16
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  390 ETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            ET     +TAP D RFP  NQTR+C+  Y+++HRC   + AKG     C+ + + Y++LCP+ W+  W+EQR  GTFPG +
Sbjct:    6 ETKLKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: CX6B1_MACMU (Cytochrome c oxidase subunit 6B1 OS=Macaca mulatta GN=COX6B1 PE=3 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.415e-16
Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 3
Query:  384 SEETPEIKLE---TAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            +EE  E K++   TAP D RFP  NQTR+C+  Y+++HRC  A   KG     C+ + + Y++LCP+ W+  W+EQR  GTFPG +
Sbjct:    2 AEEDIETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTTKGGNVSVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 87          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: CX6B1_MACFA (Cytochrome c oxidase subunit 6B1 OS=Macaca fascicularis GN=COX6B1 PE=3 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.415e-16
Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 3
Query:  384 SEETPEIKLE---TAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            +EE  E K++   TAP D RFP  NQTR+C+  Y+++HRC  A   KG     C+ + + Y++LCP+ W+  W+EQR  GTFPG +
Sbjct:    2 AEEDIETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTTKGGNVSVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 87          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: CX6B1_HUMAN (Cytochrome c oxidase subunit 6B1 OS=Homo sapiens GN=COX6B1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.415e-16
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  390 ETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            ET     +TAP D RFP  NQTR+C+  Y+++HRC   + AKG     C+ + + Y++LCP+ W+  W+EQR  GTFPG +
Sbjct:    6 ETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: CX6B1_BOVIN (Cytochrome c oxidase subunit 6B1 OS=Bos taurus GN=COX6B1 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.530e-16
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 3
Query:  411 ETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            +TAP D RFP  NQTR+C+  Y+++HRC   + AKG     C+ + + Y++LCP  W+ TW+++R  GTFPG +
Sbjct:   13 QTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 86          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: CX6B1_TARSY (Cytochrome c oxidase subunit 6B1 OS=Tarsius syrichta GN=COX6B1 PE=3 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 9.835e-16
Identity = 33/74 (44.59%), Postives = 50/74 (67.57%), Query Frame = 3
Query:  411 ETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            +TAP D RFP  NQTR+C+  Y+++HRC   + AKG     C+ + + Y++LCP  W+ TW+++R  GTFPG +
Sbjct:   13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFPGKI 86          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: CX6B2_HUMAN (Cytochrome c oxidase subunit 6B2 OS=Homo sapiens GN=COX6B2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.191e-15
Identity = 33/83 (39.76%), Postives = 53/83 (63.86%), Query Frame = 3
Query:  384 SEETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCVAAK---GEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            ++E P+ K  T P D RFP+ NQ R+C+  +++YHRC+  +   G+    C+ + + Y +LCP  W+E+WNEQ +NG F G +
Sbjct:    6 AQEPPKGKWSTPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88          
BLAST of EY735581 vs. ExPASy Swiss-Prot
Match: CX6B2_RAT (Cytochrome c oxidase subunit 6B2 OS=Rattus norvegicus GN=Cox6b2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.881e-15
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 3
Query:  414 TAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIETWNEQRENGTFPGPL 623
            T P D RFP  NQTR+C+  +++YHRCV     +G+    CD + + + +LCP  W++ WNEQ + GTFPG +
Sbjct:   16 TPPFDPRFPNQNQTRNCYQNFLDYHRCVKTMDRRGKNTQACDYYFRVFHSLCPVSWVQRWNEQIKQGTFPGKI 88          
The following BLAST results are available for this feature:
BLAST of EY735581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
COX12_SCHPO2.672e-2151.19Cytochrome c oxidase subunit 6B OS=Schizosaccharom... [more]
COX12_YEAST2.341e-1752.78Cytochrome c oxidase subunit 6B OS=Saccharomyces c... [more]
CX6B1_PONAB4.415e-1644.44Cytochrome c oxidase subunit 6B1 OS=Pongo abelii G... [more]
CX6B1_MACMU4.415e-1644.19Cytochrome c oxidase subunit 6B1 OS=Macaca mulatta... [more]
CX6B1_MACFA4.415e-1644.19Cytochrome c oxidase subunit 6B1 OS=Macaca fascicu... [more]
CX6B1_HUMAN4.415e-1644.44Cytochrome c oxidase subunit 6B1 OS=Homo sapiens G... [more]
CX6B1_BOVIN7.530e-1644.59Cytochrome c oxidase subunit 6B1 OS=Bos taurus GN=... [more]
CX6B1_TARSY9.835e-1644.59Cytochrome c oxidase subunit 6B1 OS=Tarsius syrich... [more]
CX6B2_HUMAN2.191e-1539.76Cytochrome c oxidase subunit 6B2 OS=Homo sapiens G... [more]
CX6B2_RAT4.881e-1543.84Cytochrome c oxidase subunit 6B2 OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-001-D08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735581 ID=EY735581; Name=EY735581; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGAGCAGCTGAAGAAAGTAGATCGCTTTTTGCCCATCAATG
GCGGAAGCCCAAAGCGACAAAACTCCCTCCCTAGCCGAGGATTATTTGTT
GGAAAAAGAGAAGCAAGATGTAGCTACAAAACCTGTGGTAGTAAAAGAAG
TTGAGAGTGCAGTGACTGCCTCTTCTGTGGAAGGTGCCACTGATAAAGTT
GAAGAAACACCTGCTGCCGCCGCTGTTGAAGAAAGCAAAGAAGACGCCCC
TGCTCCTGCCGCTGAAGAAAGCACTGAAGCCAGTTCTGCTTCTCCTGAGG
ACAGCACTAGTGATACGGCTCCAGCTGCTGCTGAGGAAAGCAGTGAAACT
ACGGAAGAGGAAAACTCAGGTGATCAGGAAGCCTCAGAAGAGACACCAGA
AATAAAGCTGGAGACTGCACCGGCAGATTTCCGTTTCCCAACCACAAATC
AAACAAGGCACTGCTTTACCCGATATATTGAGTATCATCGGTGTGTAGCT
GCTAAGGGAGAGGGTGCTCCAGAGTGTGATAAGTTTGCAAAATATTACCG
TGCTCTGTGCCCTAGTGACTGGATAGAAACATGGAATGAGCAAAGAGAAA
ACGGAACCTTTCCCGGTCCTCTGTAGGTGGTGCCATTTTTACGAACTTGG
GGTGTGATTCGCATCCTGCGGTTAAATTAAAGTTGCTACTCAAAATCCAG
AGGGAGTATGTCTTGAATGAGAAGTGATTTCTCGGGGATCTTGTCCTAAA
ATGCGTGGAGTTACGAGTGTTTTTGGACTGGCTAATAAGTGTTGGTGAAG
GTTGGGACGAGGGGTTGATAGTTCGTTAGATGGATTTTTTCGGTCAACGG
TCCGGATAGGGGTTGGGGGGGGGCGAGGTGGGTGAAC
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