EY735523

Overview
NameEY735523
Unique NameEY735523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.573e-45
Identity = 92/152 (60.53%), Postives = 106/152 (69.74%), Query Frame = 3
Query:   69 MEGIGGDTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIE-VADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP--WVLGQITWIL 515
            M+  GGD+ S A+PV Q  H+A R+YQ+YLDKTTPHA YRWIGTLV+  IYCLRV+Y+Q                      PLVDPE   V+DGP LPT+GSDEFKPFI RLP+FKFWYSMTKAFCIAF MTFFSVFDVP  W +    WI+
Sbjct:    1 MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIV 152          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.577e-45
Identity = 89/151 (58.94%), Postives = 104/151 (68.87%), Query Frame = 3
Query:   69 MEGIGGDTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP--WVLGQITWIL 515
            MEG GGD+ S A+PV +  H+A R+YQYYLDKTTPH+  RWIGTLV   IYCLRV+ +                       PLVDPE+EV+DG  LPT+GSDEFKPFI RLP+FKFWYSMTKAFCIAF MTFFSVFDVP  W +    W++
Sbjct:    1 MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGFYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVV 151          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.116e-26
Identity = 58/145 (40.00%), Postives = 82/145 (56.55%), Query Frame = 3
Query:   87 DTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP--WVLGQITWIL 515
            D++S A  V++  H   +  Q+ LDKT PH +YRWI  L ++ IY +RV++V+                      P  DPE  +  G  LPT+ SDE++PF+ RLP+FKFW S+ +AF I F MTFF VFDVP  W +    W++
Sbjct:   29 DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFFEVFDVPVFWPILLFYWVM 173          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1_CAEEL (Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.110e-22
Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = 3
Query:  114 SQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVAD---GPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP 485
            S++ H     YQYYLD+ TPH  +RW+  L+ L  +  R+  +Q                      P +DP +E  D   GP+LP+K +DEF+PF+ RLP+FKFW+S  KA  IA   TFF  FDVP
Sbjct:   13 SRFFHSLEVKYQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAITCTFFEFFDVP 139          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 9.200e-22
Identity = 53/140 (37.86%), Postives = 75/140 (53.57%), Query Frame = 3
Query:   72 EGIGGDTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP 485
            + IG       S V ++     ++YQ +LDK+TP+   RWI TL +  IY +RV+ +Q                      P VDP +  +  DGP LPT+ ++EF+PFI RLP+FKFW+S TK   +A   TFF  F+VP
Sbjct:    5 DSIGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMACTFFEAFNVP 144          

HSP 2 Score: 25.7942 bits (55), Expect = 9.200e-22
Identity = 19/51 (37.25%), Postives = 26/51 (50.98%), Query Frame = 1
Query:  484 PGFWAKLLGYWIDLVVLTKKNPNRTP*IKYRIISVHLCKKKIMVGKKSISK 636
            P FW  L+ Y+I L  +T K   +   IKYR I     K+K   GK+ + K
Sbjct:  144 PVFWPILVMYFIMLFCITMKRQIKHM-IKYRYIPFTHGKRKYK-GKEDVGK 192          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.636e-21
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 3
Query:   72 EGIGGDTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP 485
            + +G       S V ++     ++YQ +LDK+TPH   RW+ TL +  IY +RV+ +Q                      P VDP +  +  DGP LPTK ++EF+PFI RLP+FKFW++ TK   +A   TFF  F+VP
Sbjct:    5 DSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFEAFNVP 144          

HSP 2 Score: 22.7126 bits (47), Expect = 2.636e-21
Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 1
Query:  484 PGFWAKLLGYWIDLVVLTKKNPNRTP*IKYRII 582
            P FW  L+ Y+I L  +T K   +   IKYR I
Sbjct:  144 PVFWPILVMYFIMLFCITMKRQIKHM-IKYRYI 175          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1_PONAB (Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.662e-20
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 3
Query:   72 EGIGGDTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP 485
            + +G       S V ++     ++YQ +LDK+TP+   RW+ TL +  +Y +RV+ +Q                      P VDP +  +  DGP LPTK ++EF+PFI RLP+FKFW++ TK   +A   TFF  F+VP
Sbjct:    5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVP 144          

HSP 2 Score: 23.0978 bits (48), Expect = 1.662e-20
Identity = 18/51 (35.29%), Postives = 25/51 (49.02%), Query Frame = 1
Query:  484 PGFWAKLLGYWIDLVVLTKKNPNRTP*IKYRIISVHLCKKKIMVGKKSISK 636
            P FW  L+ Y+I L  +T K   +   IKYR I     K++   GK+   K
Sbjct:  144 PVFWPILVMYFIMLFCITMKRQIKHM-IKYRYIPFTHGKRRYR-GKEDAGK 192          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1_HUMAN (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.662e-20
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 3
Query:   72 EGIGGDTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP 485
            + +G       S V ++     ++YQ +LDK+TP+   RW+ TL +  +Y +RV+ +Q                      P VDP +  +  DGP LPTK ++EF+PFI RLP+FKFW++ TK   +A   TFF  F+VP
Sbjct:    5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVP 144          

HSP 2 Score: 23.0978 bits (48), Expect = 1.662e-20
Identity = 18/51 (35.29%), Postives = 25/51 (49.02%), Query Frame = 1
Query:  484 PGFWAKLLGYWIDLVVLTKKNPNRTP*IKYRIISVHLCKKKIMVGKKSISK 636
            P FW  L+ Y+I L  +T K   +   IKYR I     K++   GK+   K
Sbjct:  144 PVFWPILVMYFIMLFCITMKRQIKHM-IKYRYIPFTHGKRRYR-GKEDAGK 192          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1_RAT (Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 3
Query:   72 EGIGGDTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP 485
            + +G       S V ++     ++YQ +LDK+TP+   RW+ TL +  +Y +RV+ +Q                      P VDP +  +  DGP LPTK ++EF+PFI RLP+FKFW++ TK   +A   TFF  F+VP
Sbjct:    5 DSVGDSVHGKPSVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVP 144          
BLAST of EY735523 vs. ExPASy Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.655e-20
Identity = 50/140 (35.71%), Postives = 75/140 (53.57%), Query Frame = 3
Query:   72 EGIGGDTASAASPVSQWGHDARRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIPRLPKFKFWYSMTKAFCIAFEMTFFSVFDVP 485
            + +G       S V ++     ++YQ +LDK+TP+   RW+ TL +  +Y +RV+ +Q                      P VDP +  +  DGP LPTK ++EF+PFI RLP+FKFW++ TK   +A   TFF  F+VP
Sbjct:    5 DSVGDSVHGKPSVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVP 144          
The following BLAST results are available for this feature:
BLAST of EY735523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
RER1A_ARATH1.573e-4560.53Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=... [more]
RER1B_ARATH4.577e-4558.94Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=... [more]
RER1C_ARATH8.116e-2640.00Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=... [more]
RER1_CAEEL7.110e-2240.16Protein RER1 homolog OS=Caenorhabditis elegans GN=... [more]
RER1_CHICK9.200e-2237.86Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1[more]
RER1_BOVIN2.636e-2137.14Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2[more]
RER1_PONAB1.662e-2035.71Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1[more]
RER1_HUMAN1.662e-2035.71Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1[more]
RER1_RAT6.655e-2035.71Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=... [more]
RER1_MOUSE6.655e-2035.71Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-E11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735523 ID=EY735523; Name=EY735523; organism=Citrus sinensis; type=EST; length=894bp
AATCAATTTGAGTCCTTTTACCTGAACATCGAAAGACTCGTTTCAAGGAC
TTTTCATACTTAGATTGAATGGAAGGAATTGGAGGCGACACTGCCTCGGC
GGCATCCCCTGTATCACAATGGGGACATGATGCTAGGAGGCTATATCAGT
ATTACCTGGACAAGACTACTCCACATGCAGTTTATAGGTGGATTGGAACC
CTTGTAATTTTGGCAATCTACTGTTTGCGGGTTTTTTATGTGCAAGGATT
CTACATCATATCCTATGGTCTTGGGATCTATCTCCTGAATTTGCTTATTG
GGTTTTTGTCGCCTCTGGTTGATCCTGAAATCGAAGTCGCTGATGGGCCT
TTGTTGCCGACAAAGGGTTCTGATGAATTCAAGCCTTTTATTCCCCGACT
CCCAAAGTTTAAATTTTGGTACTCCATGACCAAGGCTTTCTGCATAGCTT
TTGAAATGACATTCTTTTCTGTGTTTGATGTTCCCTGGGTTTTGGGCCAA
ATTACTTGGATACTGGATTGATCTGGTTGTACTAACCAAGAAGAACCCAA
ATCGAACACCATGAATTAAGTACAGAATAATCTCCGTTCATCTTTGTAAA
AAAAAAATTATGGTTGGAAAAAAATCTATCAGTAAAGGGGTTTAAGGTCT
ACAAAGGGGAAAATGTTAACAAAAAATAATTCCCTAAGCTAGAGTAAAAA
AGGAAGAGGTTAAGTGATAAAGATATGTAAATAAAAAAATAGAATATGAA
GAAAGAAAAATCATACAATTATTGGAAACTGGATTTAGATGACAAAGTAG
ATAGATAAATTGATAGAAAAAGATACAACATAAGTATTGATAAAACAAGA
TATAACTTGGGAAAATTACAAATAAATCAACCTCAACTTGATCA
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