EY735510

Overview
NameEY735510
Unique NameEY735510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1114
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735510 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.055e-19
Identity = 57/138 (41.30%), Postives = 86/138 (62.32%), Query Frame = 2
Query:   44 RFQNLPVTISSLKCLRSLVLSGCSKLKKFPEIVESMEDLSELFLDGTSITEVPSSIELLTGLNVLNLNDCKNLVRIPDSINGLKSLQSLNLSGCFKLENVPETLGQVESLEELHISGTAIRQPPSGIFHMKNLKALYF 457
            + +N+P  +  L+ L  L LSGCSKL  FPEI  +++   EL++ GT I E+PSSI+ L  L  L+L + ++L  +P SI  LK L++LNLSGC  LE  P++  +++ L  L +S T I++ PS I ++  L  L F
Sbjct: 1317 KLENIPSMVD-LESLEVLNLSGCSKLGNFPEISPNVK---ELYMGGTMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSRTDIKELPSSISYLTALDELLF 1450          
BLAST of EY735510 vs. ExPASy Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.061e-18
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = 2
Query:   74 SLKCLRSLVLSGCSKLKKFPEIVESMEDLSELFLDGTSITEVPSSI-ELLTGLNVLNLNDCKNLVRIPDSINGLKSLQSLNLSGCFKLENVPETLGQVESLEELHISGTAIRQPPSGIFHMKNLKALYFR 460
            +++ L  L L  C  L+K PEI   M+   ++ + G+ I E+PSSI +  T +  L L + KNLV +P SI  LKSL SL++SGC KLE++PE +G +++L     S T I +PPS I  +  L  L FR
Sbjct:  686 NVESLEYLGLRSCDSLEKLPEIYGRMKPEIQIHMQGSGIRELPSSIFQYKTHVTKLLLWNMKNLVALPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFR 815          

HSP 2 Score: 74.3294 bits (181), Expect = 1.426e-12
Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = 2
Query:   56 LPVTISSLKCLRSLVLSGCSKLKKFPEIVESMEDLSELFLDGTSITEVPSSIELLTGLNVLNLNDCKNLV--RIPDSINGLKSLQSLNLSGCFKLE-NVPETLGQVESLEELHISGTAIRQPPSGIFHMKNLKALYFRWVQKIT 478
            LP +I  LK L SL +SGCSKL+  PE +  +++L       T I   PSSI  L  L +L     K+ V    P    GL SL+ LNLS C  ++  +PE +G + SL++L +S       PS I  +  L++L  +  Q++T
Sbjct:  752 LPSSICRLKSLVSLSVSGCSKLESLPEEIGDLDNLRVFDASDTLILRPPSSIIRLNKLIILMFRGFKDGVHFEFPPVAEGLHSLEYLNLSYCNLIDGGLPEEIGSLSSLKKLDLSRNNFEHLPSSIAQLGALQSLDLKDCQRLT 895          
The following BLAST results are available for this feature:
BLAST of EY735510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
WRK19_ARATH2.055e-1941.30Probable WRKY transcription factor 19 OS=Arabidops... [more]
TMVRN_NICGU5.061e-1841.54TMV resistance protein N OS=Nicotiana glutinosa GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-090-D04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735510 ID=EY735510; Name=EY735510; organism=Citrus sinensis; type=EST; length=1114bp
TTGGCGCTGCAGTACGGTCGGATTCCCGGGTCGACCCCGCGTCCGATTTC
AGAATCTTCCGGTTACCATAAGCAGTTTAAAATGTCTAAGAAGTCTGGTG
CTCTCTGGTTGCTCGAAACTGAAGAAGTTTCCAGAGATTGTGGAAAGTAT
GGAAGATCTGTCGGAGCTCTTTTTAGATGGAACTTCTATTACAGAAGTGC
CGTCATCTATAGAACTTTTGACTGGACTCAACGTGTTGAATTTGAATGAC
TGCAAAAACCTGGTGAGAATTCCCGACAGTATAAATGGTTTGAAATCCCT
CCAATCTCTAAATCTATCAGGCTGCTTCAAACTTGAAAATGTGCCTGAGA
CGCTTGGGCAAGTAGAAAGTTTGGAAGAACTTCATATAAGTGGTACAGCT
ATAAGGCAGCCTCCATCCGGGATTTTTCATATGAAGAATCTTAAAGCACT
ATATTTTCGGTGGGTGCAAAAGATCACCATCATCTTCATCATGGTCACGA
CACTTTTCCCTTCAATTTGATAAAGAGGAATTTTGGGATCCGGTGACTAT
CAGATATCCGCCATTCACATGACTGGGTTGGAATTCTTTTACCTAAATAT
GTTTCTAAAGCATATGGGATTTATAGTAGATAGGGTTAAGCTCATGTAAA
AACATGGAGTCTATCGTAATGCGTTGCTAGATTACATTTGTATGATTCCC
CAGTATTTGTTCCCTTACCCTATAAGAGAGCGACATGATTCTTTTTCGAT
ACAGGGTGGTAGATGAATTTATCGGCATACGGGAGGGTTATGATTAAGTT
CTAATAAAGTGTTAGTGAGCTGTTGCCACAGGAAGAAAAAAAGTCTAATT
CACAGCCTAATATAATTTGGATTACGTAGAATTTGGCTTAGTCAATATTC
TAGAGGGTATATTTATGTAATGCGAATTAGAGACGGAAGATCGTGAGTCA
AGATAGTTGATAGGGTAACTAGTGTGAAGTAGGGTAATTGGTGGATCGAG
AAGTGGAGATAATAGGTGTAAATCAAGCCAGAGTGCTGAGTGACATGAAA
CAATAGTAGTAGTCTTATCCGGGGAAACGCGGGATGAGAAAAGGATGGGC
GGTTGAATACGCGA
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