EY735359

Overview
NameEY735359
Unique NameEY735359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735359 vs. ExPASy Swiss-Prot
Match: RRP6_SCHPO (Exosome complex exonuclease rrp6 OS=Schizosaccharomyces pombe GN=rrp6 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.638e-13
Identity = 53/148 (35.81%), Postives = 73/148 (49.32%), Query Frame = 3 
Query:    3 RPLPAEMLQYAQTDAHYLLYIAKCLVAELKQQGNENSYCPDDKFNFVLEASRRSNMVCLQVYTKEIESY-PGEAAASSIFFRLLNGQGGVSSISSVTQDLVRRLCAWRDLMARVHDESLRFVLSDQAIIALANKAPANRTDVYTTIAQ 443
            RPLP EML+YAQ+D HYLLYI   L  EL  +  E       K N +      S  + L+ Y  E+E Y P     +  +  +L   G    I      + R L  WRD +AR  DES+R+VL ++ +IA+A   P    DV++   Q
Sbjct:  357 RPLPREMLKYAQSDTHYLLYIWDHLRNELISKSAER------KENLMQSVFNSSKQISLRKY--ELEPYDPIYGLGTDGWRNVLTKFGSSKIIGREALMIYRALHDWRDSVARKEDESVRYVLPNRLLIAIAASKPVEAADVFSISKQ 496
The following BLAST results are available for this feature:
BLAST of EY735359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RRP6_SCHPO6.638e-1335.81Exosome complex exonuclease rrp6 OS=Schizosaccharo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-096-E08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735359 ID=EY735359; Name=EY735359; organism=Citrus sinensis; type=EST; length=955bp
AGCGACCACTGCCTGCGGAAATGCTGCAATATGCTCAAACTGATGCACAT
TATTTATTGTATATTGCAAAATGTTTAGTTGCTGAGCTCAAACAACAGGG
CAATGAAAACTCATATTGCCCCGATGACAAATTCAATTTTGTTCTCGAGG
CTAGTCGCCGTTCAAACATGGTTTGTTTGCAAGTCTACACCAAAGAGATT
GAGTCTTATCCTGGAGAAGCAGCTGCATCATCGATATTTTTCCGACTATT
GAATGGCCAAGGAGGTGTTTCTTCAATTTCTTCTGTAACCCAGGATCTTG
TGAGGCGGTTGTGTGCTTGGAGAGATTTAATGGCTCGTGTGCATGATGAG
AGCTTGAGATTTGTCTTATCCGATCAGGCTATTATTGCTCTTGCCAATAA
AGCTCCGGCTAATCGCACAGATGTATACACCACCATAGCTCAAGCTGATT
CGGATGTTGATTGTTTGAATCTTAGTTCCTCTCTACCATCTCCATCCCCA
GTTGTTTGCAGTCATTTAAATGATGTAGAACGTCAGGTTTGCAATATTGT
AAAAAACCTTGATGATATTTTGTTAGCAAATCCTCAAAAGTGTCTTGGCC
CAAATGGGTATTGGCCCGTATTCTGTTTTTTAATTATGTTTTACCAGCCA
AAAATAACTGGAAAACTAAAAAATCAAACAAAAAAATTTCTTTTAAAAAC
AAAAAGGGGGTTAAATTTTCAAGGGAATTTGCTAAAAAAGGGTTCCAAAA
AATTTGTTTTGCCCAAAAATTTTCCGGGCAAATCCCCCCGTTTTTCCACA
AATTTAGAGAAATATATGGAAAAAAGAGGGGGGGGGGGGGTGTTTTTTTA
ATTGGGGAACCCCAAAAAAAACCTCCAAAAGGGGTTTTCTTAACCCCGGA
AAATTAAGAAAAAAAATGTGGTGTGTGAGAAAAAAAACCCCCCCCCCGCT
GCTGT
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