EY735337

Overview
NameEY735337
Unique NameEY735337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length942
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735337 vs. ExPASy Swiss-Prot
Match: Y2881_DICDI (Uncharacterized protein DDB_G0288155 OS=Dictyostelium discoideum GN=DDB_G0288155 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.236e-23
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 1
Query:   70 VGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLTG 384
            +G  ++ TG  L R GC++QG+Y + E+L+RH  L    D AP+V +  F+AP+ASIIGDV +G+ SSIWY  VLRGDVNSI IG  T + D ++VH + +   G
Sbjct:   10 LGEVVKNTGLILHRTGCKMQGDYAYVEKLNRHTRLTAFGDNAPIVGQKSFIAPNASIIGDVVIGKESSIWYNAVLRGDVNSIHIGDKTVVSDRTVVHCSSNGPLG 114          

HSP 2 Score: 23.0978 bits (48), Expect = 3.236e-23
Identity = 8/23 (34.78%), Postives = 14/23 (60.87%), Query Frame = 3
Query:  417 VTVGHSAVLHGCTVEDEVFVGYG 485
            V +G  +++H  T+  E F+G G
Sbjct:  124 VYIGPGSIVHAATILGESFIGTG 146          
BLAST of EY735337 vs. ExPASy Swiss-Prot
Match: Y3753_PSEAE (Uncharacterized protein PA3753 OS=Pseudomonas aeruginosa GN=PA3753 PE=3 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 7.808e-13
Identity = 25/50 (50.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query:  211 DVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVH 360
            D ++APSA++IG V++  G+S+W+G VLRGD   I IG  +N+QD S++H
Sbjct:   15 DSWIAPSAAVIGKVRLDAGASVWFGAVLRGDNELIHIGEHSNVQDGSVMH 64          

HSP 2 Score: 35.4242 bits (80), Expect = 7.808e-13
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 3
Query:  393 YLLSLEIMVTVGHSAVLHGCTVEDEVFVG 479
            Y L+L   VTVGH+A+LHGC+V D   VG
Sbjct:   69 YPLTLGKGVTVGHNAMLHGCSVGDYSLVG 97          
BLAST of EY735337 vs. ExPASy Swiss-Prot
Match: UMP6_ARATH (Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis thaliana GN=At1g47420 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.540e-13
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = 1
Query:   40 MGTLGKAIYSVGFWIRETGQALDRLGCRLQGNYYFQEQLSRHRTLMNIFDKAPVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLR 297
            MGTLG+AI++VG  IR T QA  R+G  LQG+++ ++ LSRHRTL+ +             AP+AS+IGDVQ+ +GS I Y  V R
Sbjct:    1 MGTLGRAIHTVGNRIRGTAQAQARVGSLLQGSHHIEKHLSRHRTLITV-------------APNASVIGDVQINKGSFISYASVSR 73          
BLAST of EY735337 vs. ExPASy Swiss-Prot
Match: UMP8_ARATH (Uncharacterized protein At3g48680, mitochondrial OS=Arabidopsis thaliana GN=At3g48680 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 6.502e-11
Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  196 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLTG 384
            P V  D ++AP+  + G V V  GSS+W G VLRGD+N I++G  +N+Q+  +VH A S+ TG
Sbjct:   70 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTG 132          

HSP 2 Score: 25.7942 bits (55), Expect = 6.502e-11
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 3
Query:  417 VTVGHSAVLHGCTVEDEVFVG 479
            VTVG  ++L  CT+E E  +G
Sbjct:  143 VTVGAYSLLRSCTIEPECIIG 163          
BLAST of EY735337 vs. ExPASy Swiss-Prot
Match: UMP7_ARATH (Uncharacterized protein At5g63510, mitochondrial OS=Arabidopsis thaliana GN=At5g63510 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 6.505e-11
Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  196 PVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLTG 384
            P V  D ++AP+  + G V V  GSS+W G VLRGD+N I++G  +N+Q+  +VH A S+ TG
Sbjct:   66 PKVAVDAYVAPNVVLAGQVTVWDGSSVWNGAVLRGDLNKITVGFCSNVQERCVVHAAWSSPTG 128          

HSP 2 Score: 25.7942 bits (55), Expect = 6.505e-11
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 3
Query:  417 VTVGHSAVLHGCTVEDEVFVG 479
            VTVG  ++L  CT+E E  +G
Sbjct:  139 VTVGAYSLLRSCTIEPECIIG 159          
BLAST of EY735337 vs. ExPASy Swiss-Prot
Match: YRDA_SHIFL (Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.583e-11
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 1
Query:  187 DKAPVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHV 363
            D  P + + V +  S+ +IGDV++     IW   V+RGDV+ + IG+ TNIQD S++HV
Sbjct:   10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHV 68          

HSP 2 Score: 35.8094 bits (81), Expect = 8.583e-11
Identity = 14/23 (60.87%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  417 VTVGHSAVLHGCTVEDEVFVGYG 485
            VTVGH  +LHGCT+ + V VG G
Sbjct:   87 VTVGHKVMLHGCTIGNRVLVGMG 109          
BLAST of EY735337 vs. ExPASy Swiss-Prot
Match: YRDA_ECOLI (Protein yrdA OS=Escherichia coli (strain K12) GN=yrdA PE=1 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.583e-11
Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 1
Query:  187 DKAPVVDKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHV 363
            D  P + + V +  S+ +IGDV++     IW   V+RGDV+ + IG+ TNIQD S++HV
Sbjct:   10 DLFPQIGQRVMIDDSSVVIGDVRLADDVGIWPLVVIRGDVHYVQIGARTNIQDGSMLHV 68          

HSP 2 Score: 35.8094 bits (81), Expect = 8.583e-11
Identity = 14/23 (60.87%), Postives = 17/23 (73.91%), Query Frame = 3
Query:  417 VTVGHSAVLHGCTVEDEVFVGYG 485
            VTVGH  +LHGCT+ + V VG G
Sbjct:   87 VTVGHKVMLHGCTIGNRVLVGMG 109          
The following BLAST results are available for this feature:
BLAST of EY735337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
Y2881_DICDI3.236e-2348.57Uncharacterized protein DDB_G0288155 OS=Dictyostel... [more]
Y3753_PSEAE7.808e-1350.00Uncharacterized protein PA3753 OS=Pseudomonas aeru... [more]
UMP6_ARATH8.540e-1347.67Uncharacterized protein At1g47420, mitochondrial O... [more]
UMP8_ARATH6.502e-1146.03Uncharacterized protein At3g48680, mitochondrial O... [more]
UMP7_ARATH6.505e-1146.03Uncharacterized protein At5g63510, mitochondrial O... [more]
YRDA_SHIFL8.583e-1142.37Protein yrdA OS=Shigella flexneri GN=yrdA PE=3 SV=... [more]
YRDA_ECOLI8.583e-1142.37Protein yrdA OS=Escherichia coli (strain K12) GN=y... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-096-C01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735337 ID=EY735337; Name=EY735337; organism=Citrus sinensis; type=EST; length=942bp
AAATCGAAGATCTTTGAATTTGATTCTGAGCTGACAGCGATGGGAACGCT
GGGGAAAGCAATATACAGCGTTGGATTCTGGATCCGTGAAACCGGTCAAG
CCCTTGATCGTCTCGGTTGCCGCCTCCAAGGCAACTACTACTTCCAAGAA
CAACTCTCTAGGCATCGAACACTCATGAACATTTTTGACAAAGCTCCTGT
TGTTGACAAGGATGTATTTTTGGCTCCTAGTGCATCCATCATTGGTGATG
TTCAGGTGGGCCGAGGTTCTTCCATTTGGTATGGATGTGTTTTGAGAGGT
GATGTTAACAGCATCAGCATTGGATCTGGAACCAATATACAAGACAATTC
CCTTGTTCATGTGGCAAAATCAAATTTAACTGGGAAGGTTTTTACCTACT
ATCATTGGAGATAATGGTTACTGTTGGTCACAGTGCTGTCTTGCATGGAT
GTACGGTTGAAGATGAGGTTTTTGTTGGGTATGGGGTGCCAACTTTTGCA
GGAAGGGGTTAATGTTGAAAAAAACTGCTATGGGGTAGCAGCTGGAAGCT
CTTGAAAAAGAAAAACAACAAAAAATTCAAGGGGGGGGGAGGGTTTGGGG
GAGGTAATCCAGCCAAGGATTCCCGGAAAAAGTTCTACAAAAGAAAAAAA
AATGGGGACTGTATTTTCCACAGTCCAGCCCTTTAATTTATTACTAATAT
TGGGCCCCAAAGTTCCTGGCGAATTAAAAAATGACACAAAAGCGTCTTTA
ACCAGAATTTGTGAGTATTTGAAAAAAAATAACGTACGCCAAGAAAAAAT
TTAGCCCCCGCCTCAGGAGAAGAAAAAAAAAAGGGATATAGGAACGGCGC
ATAGAGGTGATCAAATAACAAAAAAAAACCCGCCACCCCGCAAAGACACC
AACAACGCGCACGTGCGAGAGGATGGAGGGGGCATCACAAAG
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