EY735213
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFC_ARATH (Auxin response factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 1.112e-51 Identity = 121/237 (51.05%), Postives = 146/237 (61.60%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHD-ELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPPPGL---YATEAFTAACSKGSPWCGMEVQTHLKGGNPRRIS*TPWMEGVC*KKKACFWTTLVFP*GGDKGTLKNELPRTTPRKKRGATLPLFFRQQINQGN 826 ELWHACAGPLISLPKRGS+V+YFPQGHLE DF Y +PPH+FCR+ DVKLHA+ +DEVYAQVSL+ + E IE+KVR+G I DG EE EV +S+TPHMFCKTLTASDTST GGFSVPRRAAEDCFPP ++ A G W H+ G PRR T KKK ++F GD G L+ + R + + + A L + Q +N N Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQAPDFSAAI---YGLPPHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEW----RFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL-RGDDGKLRLGVRRAS-QIEGTAALSAQYNQNMNHNN 281
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.809e-50 Identity = 80/141 (56.74%), Postives = 97/141 (68.79%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEH---VSDFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGK-IKE-DGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPP 535 ELWHACAGPL LPK+G+VVVYFPQGHLE VS +D+ P + CRV +V+L A+ +DEVY QV+L+ + +GK +KE G+EE ++ TPHMFCKTLTASDTST GGFSVPRRAAEDCF P Sbjct: 65 ELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLEIPKFDLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAP 205 HSP 2 Score: 74.3294 bits (181), Expect = 1.809e-50 Identity = 40/66 (60.61%), Postives = 43/66 (65.15%), Query Frame = 3 Query: 534 PLDYMQQRPSQQLVAKDLHGVEWKFRHI*RGAIHGGFPEPLGWKAFVKKKKLVSGQPWFF--PEGG 725 PLDY QQRPSQ+L+AKDLHGVEWKFRHI RG GW FV +K LVSG F EGG Sbjct: 205 PLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHL-LTTGWSIFVSQKNLVSGDAVLFLRDEGG 269
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFB_ORYSJ (Auxin response factor 2 OS=Oryza sativa subsp. japonica GN=ARF2 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.536e-44 Identity = 110/235 (46.81%), Postives = 135/235 (57.45%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHD-ELIEQKVRKGKIKEDGDEESVEVAAKSST-PHMFCKTLTASDTSTCGGFSVPRRAAEDCFPPPGLYATEAFTAACSK---GSPWCGMEVQTHLKGGNPRRIS*TPWMEGVC*KKKACFWTTLVFP*GGDKGTLKNELPRTTPRKKRGATLPLFFRQQIN 817 ELWHACAGP+ LP++GS VVY PQGHLEH+ +PPH+FCRV DV LHADAA+DEVYAQVSLV D E +E+++R+G+ D E + + + PHMFCKTLTASDTST GGFSVPRRAAEDCFPP F +K G+ W H+ G PRR T G KKK ++F G D G L+ + R + K + P Q N Sbjct: 39 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSGPGAA-VPPHVFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEW----RFRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGED-GELRLGV-RRAAQLKNASPFPALHNQISN 266
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFO_ORYSJ (Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.233e-42 Identity = 115/270 (42.59%), Postives = 141/270 (52.22%), Query Frame = 2 Query: 53 IDLNKTKDDE---------NPXXXXXXXXXXXXXELWHACAGPLISLPKRGSVVVYFPQGHLEHVSDFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHD-ELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPP---PGLYATEAFTAACSKGSPWCGMEVQTHLKGGNPRRIS*TPWMEGVC*KKKACFWTTLVFP*GGDKGTLKNELPRTTPRKKRGATLPLFFRQQINQG 823 IDLN ++DE N ELWHACAGP+ LP++G VVVY PQGHLEH+ D +PPH+FCRV DV L ADAA+DEVYAQ+SLV + E + ++ G+ EDGD A PHMFCKTLTASDTST GGFSVPRRAAEDCFPP ++ A + W H+ G PRR T KKK ++F GD G L+ + R + K G+ P + Q N G Sbjct: 4 IDLNTVEEDEEEAAEEVAANGSSPAPARAGAVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPAAAAAAAAVPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEVARRADDGE-GEDGDGMKQRFA---RMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEW----RFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL-RGDDGELRLGV-RRAAQLKNGSAFPALYNQCSNLG 263
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFF_ORYSJ (Auxin response factor 6 OS=Oryza sativa subsp. japonica GN=ARF6 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.870e-42 Identity = 72/141 (51.06%), Postives = 91/141 (64.54%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVS-----DFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPP 535 ELWHACAGPL+SLP GS VVYFPQGH E V+ + ++PP L C++ +V +HADA +DEVYAQ++L Q + ++K+ + A+K T + FCKTLTASDTST GGFSVPRRAAE FPP Sbjct: 30 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTL-------QPLSPQELKDPFLPAELGTASKQPT-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 162 HSP 2 Score: 63.1586 bits (152), Expect = 5.870e-42 Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 3 Query: 534 PLDYMQQRPSQQLVAKDLHGVEWKFRHI*RGAIHGGFPEPLGWKAFVKKKKLVSGQPWFF 713 PLD+ QQ P+Q+L+AKDLHG EWKFRHI RG GW FV K+LV+G F Sbjct: 162 PLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHL-LTTGWSVFVSAKRLVAGDSVLF 220
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFF_ORYSI (Auxin response factor 6 OS=Oryza sativa subsp. indica GN=ARF6 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 5.870e-42 Identity = 72/141 (51.06%), Postives = 91/141 (64.54%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVS-----DFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPP 535 ELWHACAGPL+SLP GS VVYFPQGH E V+ + ++PP L C++ +V +HADA +DEVYAQ++L Q + ++K+ + A+K T + FCKTLTASDTST GGFSVPRRAAE FPP Sbjct: 30 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTL-------QPLSPQELKDPFLPAELGTASKQPT-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 162 HSP 2 Score: 63.1586 bits (152), Expect = 5.870e-42 Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 3 Query: 534 PLDYMQQRPSQQLVAKDLHGVEWKFRHI*RGAIHGGFPEPLGWKAFVKKKKLVSGQPWFF 713 PLD+ QQ P+Q+L+AKDLHG EWKFRHI RG GW FV K+LV+G F Sbjct: 162 PLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHL-LTTGWSVFVSAKRLVAGDSVLF 220
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSJ (Auxin response factor 17 OS=Oryza sativa subsp. japonica GN=ARF17 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.298e-41 Identity = 72/141 (51.06%), Postives = 90/141 (63.83%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVS-----DFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPP 535 ELWHACAGPL+SLP GS VVYFPQGH E V+ + ++PP L C++ +V +HADA +DEVYAQ++L Q + ++K+ + A K T + FCKTLTASDTST GGFSVPRRAAE FPP Sbjct: 30 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTL-------QPLSPQELKDPYLPAELGSANKQPT-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 162 HSP 2 Score: 63.929 bits (154), Expect = 1.298e-41 Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 3 Query: 534 PLDYMQQRPSQQLVAKDLHGVEWKFRHI*RGAIHGGFPEPLGWKAFVKKKKLVSGQPWFF 713 PLD+ QQ P+Q+L+AKDLHG EWKFRHI RG GW FV K+LV+G F Sbjct: 162 PLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHL-LTTGWSVFVSAKRLVAGDSVLF 220
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFQ_ORYSI (Auxin response factor 17 OS=Oryza sativa subsp. indica GN=ARF17 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.298e-41 Identity = 72/141 (51.06%), Postives = 90/141 (63.83%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVS-----DFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPP 535 ELWHACAGPL+SLP GS VVYFPQGH E V+ + ++PP L C++ +V +HADA +DEVYAQ++L Q + ++K+ + A K T + FCKTLTASDTST GGFSVPRRAAE FPP Sbjct: 30 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTL-------QPLSPQELKDPYLPAELGSANKQPT-NYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 162 HSP 2 Score: 63.929 bits (154), Expect = 1.298e-41 Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 3 Query: 534 PLDYMQQRPSQQLVAKDLHGVEWKFRHI*RGAIHGGFPEPLGWKAFVKKKKLVSGQPWFF 713 PLD+ QQ P+Q+L+AKDLHG EWKFRHI RG GW FV K+LV+G F Sbjct: 162 PLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHL-LTTGWSVFVSAKRLVAGDSVLF 220
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFH_ARATH (Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 3.112e-40 Identity = 72/142 (50.70%), Postives = 86/142 (60.56%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEHVS-----DFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSLVHDELIEQKVRKGKIKEDGDEESVEVAAKSSTP-HMFCKTLTASDTSTCGGFSVPRRAAEDCFPP 535 ELWHACAGPL+SLP GS VVYFPQGH E V+ + +PP L C++ +V +HAD +DEVYAQ++L EQK +E+ S P + FCKTLTASDTST GGFSVPRRAAE FPP Sbjct: 22 ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQK---------ETFVPIELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPP 154 HSP 2 Score: 61.6178 bits (148), Expect = 3.112e-40 Identity = 31/60 (51.67%), Postives = 37/60 (61.67%), Query Frame = 3 Query: 534 PLDYMQQRPSQQLVAKDLHGVEWKFRHI*RGAIHGGFPEPLGWKAFVKKKKLVSGQPWFF 713 PLDY Q P+Q+L+A+DLH VEWKFRHI RG GW FV K+LV+G F Sbjct: 154 PLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHL-LTTGWSVFVSAKRLVAGDSVIF 212
BLAST of EY735213 vs. ExPASy Swiss-Prot
Match: ARFC_ORYSJ (Auxin response factor 3 OS=Oryza sativa subsp. japonica GN=ARF3 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.276e-39 Identity = 100/220 (45.45%), Postives = 126/220 (57.27%), Query Frame = 2 Query: 128 ELWHACAGPLISLPKRGSVVVYFPQGHLEHV-SDFXXXXXXXYDIPPHLFCRVADVKLHADAASDEVYAQVSL-VHDELIEQKVRKGKIKEDGDEESVEVAAKSSTPHMFCKTLTASDTSTCGGFSVPRRAAEDCFPP---PGLYATEAFTAACSKGSPWCGMEVQTHLKGGNPRRIS*TPWMEGVC*KKKACFWTTLVFP*GGDKGTLKNELPRTTPRK 772 +LWHACAGP++SLP+RGS VVY PQGHL + +PPH+ CRV DV+L ADAA+DEVYA+++L E+ E+ + G I+ + D E + KS HMFCKTLTASDTST GGFSVPRRAAEDCFPP L ++ A G+ W H+ G PRR T KKK ++F GD G L+ + R T K Sbjct: 82 DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVALPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKW----RFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFL-RGDDGELRLGVRRATQLK 296 The following BLAST results are available for this feature:
BLAST of EY735213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735213 ID=EY735213; Name=EY735213; organism=Citrus sinensis; type=EST; length=887bpback to top |