EY735196

Overview
NameEY735196
Unique NameEY735196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length761
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735196 vs. ExPASy Swiss-Prot
Match: YVRI_CAEEL (GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.029e-12
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = 3
Query:  144 NSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCI-ESLVYEHKYSQ-WETCFDKLELD---PKPIVDCYTSGYGTQLELKYAAETNSLVP 572
            N K+ + +  E+LCP   NF+   L  I    +  + V++ L P+GNAK+   + T  CQHG  EC +N  E C IDS  +     P + CI ESL  + +++   + CF+KL++     +    C  S  G  L+ K AA T ++ P
Sbjct:   73 NQKINITVLIEALCPDCQNFLTKQLYPIVFK-NFANYVNIELVPFGNAKV-LEDGTIKCQHGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGGDIQRLTQSCLVSKLGADLQNKAAAATANVWP 217          
BLAST of EY735196 vs. ExPASy Swiss-Prot
Match: GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.564e-11
Identity = 47/147 (31.97%), Postives = 71/147 (48.30%), Query Frame = 3
Query:  153 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIR--ANNSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDKLE--LDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQ 581
            V + LYYE+LC     F+I  L   +  + ++ I+++ L P+GNA+ +  +    F CQHG  EC  N VEAC +D   EL+    F+  +    +E        C       L P  I++C     G QL    A  T++L PPH+
Sbjct:   73 VNVTLYYEALCGGCRAFLIRELFPTW--LLVMEILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLD---ELDMELAFLTIVCMEEFEDMERSLPLCLQLYAPGLSPDTIMECAMGDRGMQLMHANAQRTDALQPPHE 214          
BLAST of EY735196 vs. ExPASy Swiss-Prot
Match: YKJ2_CAEEL (GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.712e-11
Identity = 46/164 (28.05%), Postives = 80/164 (48.78%), Query Frame = 3
Query:   96 FLSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNSTFD--CQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDKLELDP---KPIVDCYTSGYGTQLELKYAAETNSLVP 572
            F+     A  T    V + VKL +Y E+ CP ++ F    L K ++ +  L+ ++L++ P+G A+     + F+  CQHGP+EC +N +  C ID +   +++ P + C++      KYS  E      E  P   + + +C +   G +L      +T SL P
Sbjct:  120 FIEYEPKAGPTIKEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQG-----KYSLDEAMKCVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTP 278          
The following BLAST results are available for this feature:
BLAST of EY735196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YVRI_CAEEL3.029e-1233.11GILT-like protein F37H8.5 OS=Caenorhabditis elegan... [more]
GILT_HUMAN2.564e-1131.97Gamma-interferon-inducible lysosomal thiol reducta... [more]
YKJ2_CAEEL5.712e-1128.05GILT-like protein C02D5.2 OS=Caenorhabditis elegan... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-G01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735196 ID=EY735196; Name=EY735196; organism=Citrus sinensis; type=EST; length=761bp
AAAAAATAGCCCTAATTTACGGATTCATCTATGGCTTCTTCTTCTTCTTC
CTCAAAAAAGCCTTATCTCTTGTCTTTTACATTACCTTGTTCTGCTTCTT
GTCTGGCTCTGTTTCAGCTTCTAGAACTTCACCTTCAGATGTTAACAGTA
AAGTCAAGTTAGGTCTGTACTACGAGTCTTTGTGTCCATACAGTGCCAAT
TTCATTATCAATTACTTGGTTAAAATCTTTGAAGATGTTGATCTGTTATC
CATCGTTGATCTCCATCTTTCTCCCTGGGGGAACGCCAAAATCAGAGCCA
ACAACAGCACCTTTGATTGCCAGCATGGCCCTTCTGAATGCTTGCTGAAC
ACTGTGGAAGCTTGTGCGATTGATAGTTGGCCTGAATTGAACAAGCATTT
CCCGTTTATCTACTGCATTGAGAGTTTAGTGTACGAGCATAAGTATTCTC
AGTGGGAAACATGCTTTGATAAATTGGAACTGGATCCGAAACCAATTGTT
GATTGCTATACCAGTGGATATGGAACACAGCTTGAGTTAAAATATGCAGC
TGAAACAAATTCCCTTGTGCCTCCTCATCAATAATGTGCCTTGGGTTGTT
GGGGAAAGACAACCCCTGTATGAGGACTACAAAATTTTTATACCTAGGCT
TCCAGGGCTTATAAAGGCATTGGCTGGCTTAAAGTTTGCCACAAACTATT
CCCTCCTCACAAAAATATTATGAGACCCGAAAAAAAACCTTGGCCTTTCC
AATTGATTAAA
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