EY735181

Overview
NameEY735181
Unique NameEY735181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735181 vs. ExPASy Swiss-Prot
Match: MMSA_ARATH (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana GN=ALDH6B2 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 4.247e-19
Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 1 
Query:    1 FFSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGGSGVSLAMPTSQK 162
            FFSFTG+KASFAGDLNFYGKAGV+F+TQIKTVTQQW+D+P  + VSLAMPTSQK
Sbjct:  555 FFSFTGNKASFAGDLNFYGKAGVDFFTQIKTVTQQWKDIP--TSVSLAMPTSQK 606
[Close]
BLAST of EY735181 vs. ExPASy Swiss-Prot
Match: MMSA_BOVIN (Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Bos taurus GN=ALDH6A1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.559e-11
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 1 
Query:    4 FSFTGSKASFAGDLNFYGKAGVNFYTQIKTVTQQWRDLPGG-SGVSLAMPT 153
            FSFTGS+ASF GD NFYGK G+ FYTQ+KT+T QW++     S  ++ MPT
Sbjct:  484 FSFTGSRASFRGDTNFYGKQGIQFYTQLKTITSQWKEEDASLSSPAVVMPT 534
The following BLAST results are available for this feature:
BLAST of EY735181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MMSA_ARATH4.247e-1983.33Methylmalonate-semialdehyde dehydrogenase [acylati... [more]
MMSA_BOVIN5.559e-1158.82Methylmalonate-semialdehyde dehydrogenase [acylati... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-E04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735181 ID=EY735181; Name=EY735181; organism=Citrus sinensis; type=EST; length=565bp
TTTTTCTCATTTACGGGCTCAAAGGCATCTTTTGCTGGTGATTTGAATTT
CTATGGCAAGGCTGGAGTTAATTTCTACACTCAGATCAAAACAGTGACTC
AACAATGGAGGGATTTACCTGGTGGCAGTGGCGTTTCGCTGGCAATGCCA
ACCTCTCAGAAGTAAGAGCTGTGGCAGCGAGTGTAACTAAATGCTGTTGT
GCAACTTTTGTGAACCCTTCAATAAATTAGTGCAATCTCTTGCTCTGTCT
TGCACAAATGTCCCTTTCCTTTTGACTCTTTTTCCTTTTTTCTTTTTTTC
CTTTTGAAGTAATTCAAACTCTAATAGGAGTAGAAGAGTAATGAAAATAA
ATAACACAACACTTAACATGTTTTGCTTGCAAATTACTGGAGCATGTTAA
GCGGTTGTAGCTGTAATTTGTAAATGACAATCGACTTCCATGATACTGTA
GTGACTTTCATGTATAGTAAAAGGCAACGTGAAATTATTCTCCTANAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAA
AAANAAAAAAANAGG
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