EY735134

Overview
NameEY735134
Unique NameEY735134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735134 vs. ExPASy Swiss-Prot
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana GN=At5g09450 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.478e-23
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 1 
Query:  112 IWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEIIDQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTN 366
            IWKSLR T Q ++SR+YIC+LSSYLMLGHL+E  EII QWK+S T++FD SAC R+L AF DVGL   A+ FH++L+   C+  N
Sbjct:  321 IWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLILVHNKCSLEN 405
The following BLAST results are available for this feature:
BLAST of EY735134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PP372_ARATH3.478e-2360.00Pentatricopeptide repeat-containing protein At5g09... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-G09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735134 ID=EY735134; Name=EY735134; organism=Citrus sinensis; type=EST; length=1010bp
GAACCGGCGCGGCCCGCCAAAACACCNNACCCGCCTNTNNNAAAANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACGCGTCCGAAAA
TTGATCANNAGATATGGAAATCCTTAAGGATGACTAAACAAAAGATGACG
AGCAGAAACTACATCTGCATTCTTTCATCTTATCTGATGCTTGGACATTT
GAAAGAAGTGGGAGAAATTATTGATCAATGGAAACAATCTGCCACTTCAG
ACTTTGATATCTCCGCCTGTAATAGGCTTTTGGGTGCATTTTCAGATGTT
GGATTGACTGAAAAGGCCAATGAATTTCATATGCTTCTGCTGCAGAAAAA
CTGTGCCCCTACAAATGCATCAGGATAGAGTTTAGTGTATCATCACCAGA
ACAATGCATTCCAGAGTACCATCATGATGGCTGGATATTTTGAAGAAAAA
TAAGATCTTCACAGTTGCTGCAAACTTTCAGCATGCCTGATTACTGCATG
TTCTGCATATTTTTCATGAAAGTGGATTTCATGGCTCCTATAAGTATTGT
TCTTTCCTTATAATTCCCATTTACTATATGAGCAGAGCTCCAGGCTTTCT
TAATGCTTATGTAACTGATATTTCACAACTTCTATAACTAATACCGCATG
AAATAGAATGGTTTTGAGGAGAGGAATTTTAACGATTTAGATCATAATAT
TTTAAACAAATGCTTTCCTCTCGGTTACCAAATTTCCCTCCGGGGATATT
TTTCAGGGGATAACCCCGGTAATGATCCAATGATCCCTCTTCCCCCCCCC
GGAACCACAGGGGACAAACGCAAAACCGGGCCCGCCCCGAGACGCACCGA
GGCGCGCGAAGAAGGCGCGTGGCGAGCGGGAGGGCGGGAGGGCGCACGTG
CCACTCCCGACGACCGGGCAAGAGACAAACGCAGCGGGGAGGCCCCGCCG
CCCCATAGGGGCCGCGGCTACCCCGCCTCGCCTCCGCCCAAAACTCACTT
TGCAGCACAG
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