EY735133

Overview
NameEY735133
Unique NameEY735133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1016
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735133 vs. ExPASy Swiss-Prot
Match: CLPP5_ARATH (ATP-dependent Clp protease proteolytic subunit 5, chloroplastic OS=Arabidopsis thaliana GN=CLPP5 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.962e-35
Identity = 88/162 (54.32%), Postives = 105/162 (64.81%), Query Frame = 1 
Query:  328 PNPSSNIDAHKLSHTFRPIGSRKPRKLVSIQKNLRNSSVRAVYSGKFWAPDRSYRQGIWSIRDDLQIPSSPYFPVHAAGPPPANPMVQERFQSVISQLFHHRIIPCAGTVDDDMANIIGAPPSPSWRLLDPPKENRYLWSLPQGGQLPAGTGPILTL*KIIP 813
            PN SS  D+ KLS  F P+ SRK  KLVS +KN +NS+ +AVYSG  W P+    QG+WSIRDDLQ+PSSPYFP +A G  P  PMVQERFQS+ISQLF +RII C G VDDDMANII A        +DP K+     + P GG + AG     T+  I P
Sbjct:   24 PNGSS-FDSPKLSLPFEPLRSRKTNKLVSDRKNWKNSTPKAVYSGNLWTPEIPSPQGVWSIRDDLQVPSSPYFPAYAQGQGPP-PMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVA-QLLYLDAVDPTKDIVMYVNSP-GGSVTAGMAIFDTMRHIRP 181
The following BLAST results are available for this feature:
BLAST of EY735133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CLPP5_ARATH3.962e-3554.32ATP-dependent Clp protease proteolytic subunit 5, ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-G08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735133 ID=EY735133; Name=EY735133; organism=Citrus sinensis; type=EST; length=1016bp
AGGANAAAACCCAAATAACCAGCAAAACGGCGTGCCCAATAGTNNNGGAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACGCGTCCG
GCTGGAACGGGNNTACTCTTATCGGTCCAAATCCCGGCGCCCTCCACATC
CAGCCTTTAACATCAAGCAGATAAGGCGCTTCTGATTTGGAGGAAAATAA
AAAGCCTCCACCTAATTTACCGAAAACGTCTTTCAGACACTGCCACATAA
ACGGCAAAAATCGAAGAGATATGGCACAAACGAGCGCTTCCACATCTTCG
GCATCGTTGTACTCTCTTGTCGTCTCTCCAAACCCTAGCTCCAATATCGA
CGCTCATAAACTCTCTCACACCTTCCGCCCCATTGGTTCCCGGAAACCAA
GGAAACTAGTTAGTATTCAAAAGAATTTGCGGAATTCTTCAGTAAGGGCT
GTCTACTCTGGCAAGTTTTGGGCTCCAGATAGAAGTTATCGCCAGGGGAT
TTGGTCCATTAGGGATGATTTGCAAATCCCATCTTCACCATACTTCCCTG
TACATGCCGCAGGGCCACCACCTGCTAACCCGATGGTGCAAGAGCGGTTT
CAGAGTGTTATCAGTCAACTTTTCCACCATAGAATAATTCCCTGTGCGGG
AACTGTTGATGATGACATGGCGAACATTATTGGAGCTCCCCCTTCTCCAT
CCTGGAGGCTATTGGATCCTCCCAAGGAAAATCGGTATCTATGGTCACTC
CCCCAGGGAGGACAGCTACCTGCCGGTACTGGCCCTATTTTGACACTATG
AAAGATTATTCCAACCTTTAAGTCTCCACTGGGTTTATGTTGCGAATTCC
CACCTCAGGTAACAAAACTCATGGCATAAAACTGGGTTACGGGTTTCGCG
AAACAAATTTATGACCCGGAAGCGAGGAGTAAGTACCGTGAGACGAAGGC
TGCATAATTCTTTCGTTTATTGCCTCCACACAGAAGGGAGTTACTAGAGA
CACCGCTCTGGCGCGT
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