EY734998

Overview
NameEY734998
Unique NameEY734998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: UNE12_ARATH (Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 5.406e-25
Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNKTDKAAMLDEIVDYVKFLKLQVKVLSMSRLGAAG 886
            GQATDPHSIAERLRRERIA+R+RA  ELVP+ NKTD+AAM+DEIVDYVKFL+LQVKVLSMSRLG AG
Sbjct:  151 GQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAG 217          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH007_ARATH (Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.204e-24
Identity = 56/67 (83.58%), Postives = 63/67 (94.03%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNKTDKAAMLDEIVDYVKFLKLQVKVLSMSRLGAAG 886
            GQATDPHSIAERLRRERIA+R+R+  ELVP+ NKTD+AAM+DEIVDYVKFL+LQVKVLSMSRLG AG
Sbjct:  149 GQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAG 215          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.504e-24
Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNKTDKAAMLDEIVDYVKFLKLQVKVLSMSRLGAAGCRG 895
            GQATDPHSIAERLRRERIA+RM++  ELVP+ NKTDKA+MLDEI++YV+FL+LQVKVLSMSRLG AG  G
Sbjct:  104 GQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGAGSVG 173          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.504e-24
Identity = 56/66 (84.85%), Postives = 62/66 (93.94%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNKTDKAAMLDEIVDYVKFLKLQVKVLSMSRLGAA 883
            GQATDPHSIAERLRRERIA+RM+A  ELVP+ NKTDKA+MLDEI+DYVKFL+LQVKVLSMSRLG A
Sbjct:  143 GQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 208          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 4.577e-24
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNKTDKAAMLDEIVDYVKFLKLQVKVLSMSRLGAAGCRGS 898
            GQATDPHSIAERLRRERIA+RM++  ELVP+ NKTDKA+MLDEI+DYVKFL+LQVKVLSMSRLG A    S
Sbjct:  135 GQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASS 205          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH074_ARATH (Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.565e-14
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNK-TDKAAMLDEIVDYVKFLKLQVKVLSM 865
            GQAT+ HS+AER+RRE+I++RMR   ELVP CNK T KA MLDEI++YV+ L+ QV+ LSM
Sbjct:  211 GQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSM 271          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.632e-13
Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNK-TDKAAMLDEIVDYVKFLKLQVKVLSM 865
            GQATD HS+AER+RRE+I++RM+   +LVP CNK T KA MLDEI++YV+ L+ QV+ LSM
Sbjct:  263 GQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 323          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.131e-13
Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNK-TDKAAMLDEIVDYVKFLKLQVKVLSM 865
            GQATD HS+AER+RRE+I +RM+   +LVP CNK T KA MLDEI++YV+ L+ QV+ LSM
Sbjct:  306 GQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 366          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.783e-13
Identity = 38/61 (62.30%), Postives = 49/61 (80.33%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNK-TDKAAMLDEIVDYVKFLKLQVKVLSM 865
            GQATD HS+AER+RRE+I++RMR    LVP C+K T KA MLDEI++YV+ L+ QV+ LSM
Sbjct:  141 GQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSM 201          
BLAST of EY734998 vs. ExPASy Swiss-Prot
Match: BH063_ARATH (Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.747e-13
Identity = 37/61 (60.66%), Postives = 50/61 (81.97%), Query Frame = 2
Query:  686 GQATDPHSIAERLRRERIADRMRAFAELVPSCNK-TDKAAMLDEIVDYVKFLKLQVKVLSM 865
            GQATD HSIAER+RRE+I++RM+   +LVP C+K T KA MLDEI++YV+ L+ Q++ LSM
Sbjct:  177 GQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLSM 237          
The following BLAST results are available for this feature:
BLAST of EY734998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
UNE12_ARATH5.406e-2585.07Transcription factor UNE12 OS=Arabidopsis thaliana... [more]
BH007_ARATH1.204e-2483.58Transcription factor bHLH7 OS=Arabidopsis thaliana... [more]
BH082_ARATH3.504e-2478.57Transcription factor bHLH82 OS=Arabidopsis thalian... [more]
BH066_ARATH3.504e-2484.85Transcription factor bHLH66 OS=Arabidopsis thalian... [more]
BH069_ARATH4.577e-2478.87Transcription factor bHLH69 OS=Arabidopsis thalian... [more]
BH074_ARATH9.565e-1463.93Transcription factor bHLH74 OS=Arabidopsis thalian... [more]
BH062_ARATH1.632e-1362.30Transcription factor bHLH62 OS=Arabidopsis thalian... [more]
BH078_ARATH2.131e-1362.30Transcription factor bHLH78 OS=Arabidopsis thalian... [more]
BH137_ARATH2.783e-1362.30Transcription factor bHLH137 OS=Arabidopsis thalia... [more]
BH063_ARATH4.747e-1360.66Transcription factor bHLH63 OS=Arabidopsis thalian... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-075-B07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734998 ID=EY734998; Name=EY734998; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGATTTCTGTTGTCTCC
ATTCAAGAAGCCCTTCCATTTACTTAAACCCAAGACAAACAAACAAACAA
ACAAACGAATCCCTCATCAAAACAAAACATATCAACACAACACTAATTAT
GTCTACCACTGGCAATGGCCAAGAAAGCTTAGGAGATGACTTCTTCGAGC
AAATCTTGTCCGTCCCAACCGGTTACACCGACCCATCTGCTGCTGCTTCA
AACTCCGCTGATGACATACCCATGTTCCTACAGCTGGGCTCCGGCGGCCC
TTCTCCTGGCGCCGGAGGAGGCGGAGGAGGCGCCACCAGTGCTGCTGACA
TAAGAAGTTTGGCTATGGGAATCAGCATGGGAATGATGCCTCTAGGGTTA
AATTTGGAGCATAGCTTCTTAAGGCAGCATGAAGATCATAATAGTAACCA
TAACAACAACAACACTAATGCTTCTTCTTCTCCTCCTAATAATTCTTCTG
CCACTTCTGGAATCAACGAGAGAGATTCCGTGCACATGCCAAGTTTGTTT
CCAGCGTTTGGACAGTTGCAAAGTCAATCAGCCCGGCCGCCACCGCCACG
TCCTCCTCAAGTACAACAGTTTCAGAGCCAAGCAGCAGCCGCACCGCAGC
CTCCAGCTGTCCGTCCAAGGGTTCGAGCAAGACGAGGGCAAGCCACGGAT
CCTCACAGCATTGCCGAGCGGTTGCGTAGAGAAAGAATTGCGGATAGAAT
GAGGGCTTTTGCAGAGCTGGTTCCTAGCTGCAACAAGACGGATAAGGCAG
CCATGCTTGATGAAATCGTGGATTACGTGAAGTTTCTAAAGCTTCAAGTC
AAGGTTTTGAGCATGAGTAGACTGGGTGCAGCTGGGTGCCGTGGCTCAAC
TTGGTACTG
back to top