EY734973

Overview
NameEY734973
Unique NameEY734973
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.347e-82
Identity = 149/167 (89.22%), Postives = 160/167 (95.81%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGFPAK 513
            TPGF GADIANVCNEAALIAAR E +Q+TM+HFE+AIDR+IGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAE+VL+G+ISTGAQNDLEKV KMTYA VAVYGFS+KVGLL FP +
Sbjct:  539 TPGFAGADIANVCNEAALIAARSEETQITMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEEVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQR 705          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 1.165e-81
Identity = 149/167 (89.22%), Postives = 159/167 (95.21%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGFPAK 513
            TPGF GADIANVCNEAALIAAR E + +TM+HFE+AIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPN+NLL+TKEQLFDMTCMTLGGRAAE+VL+GKISTGAQNDLEKV KMTYA VAVYGFS+KVGLL FP +
Sbjct:  524 TPGFAGADIANVCNEAALIAARSEGTLITMQHFESAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDNLLMTKEQLFDMTCMTLGGRAAEEVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQR 690          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 1.165e-81
Identity = 151/167 (90.42%), Postives = 157/167 (94.01%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGFPAK 513
            TPGF GADIANVCNEAALIAAR E + VTM HFE+AIDRVIGGLEKKN+VISKLERRTVAYHESGHAV GWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAEQVL+GKISTGAQNDLEKV KMTYA VAVYGFSDKVGLL FP +
Sbjct:  525 TPGFAGADIANVCNEAALIAARHEGATVTMAHFESAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPR 691          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.595e-81
Identity = 149/167 (89.22%), Postives = 158/167 (94.61%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGFPAK 513
            TPGF GADIANVCNEAALIAAR E + VTM HF++AIDRVIGGLEKKN+VISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLL+TKEQLFDMTCMTLGGRAAEQVL+G+ISTGAQNDLEKV KMTYA VAVYGFSDK+GLL FP +
Sbjct:  531 TPGFAGADIANVCNEAALIAARHEGATVTMAHFDSAIDRVIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAAEQVLIGRISTGAQNDLEKVTKMTYAQVAVYGFSDKIGLLSFPQR 697          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 1.098e-55
Identity = 102/169 (60.36%), Postives = 131/169 (77.51%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGFPAKRR 519
            TPGF GAD+ANVCNEAALIAAR  +  +  +HFE AI+RVIGGLEKK +V+   E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG   LG+AQY+P E  L TKEQL D  CMTLGGR +E++  G+I+TGAQ+DL KV +  YA +  +G ++KVG + F   R+
Sbjct:  513 TPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG-KGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQ 680          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.446e-55
Identity = 102/169 (60.36%), Postives = 131/169 (77.51%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGFPAKRR 519
            TPGF GAD+ANVCNEAALIAAR  +  +  +HFE AI+RVIGGLEKK +V+   E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG   LG+AQY+P E  L TKEQL D  CMTLGGR +E++  G+I+TGAQ+DL KV +  YA +  +G ++KVG + F   R+
Sbjct:  512 TPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG-KGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQ 679          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.446e-55
Identity = 101/169 (59.76%), Postives = 131/169 (77.51%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGFPAKRR 519
            TPGF GAD+ANVCNEAALIAAR  +  +  +HFE AI+RVIGGLEKK +V+   E++TVAYHE+GHAVAGW+LEHA+PLLKV+I+PRG   LG+AQY+P E  L T+EQL D  CMTLGGR +E++  G+I+TGAQ+DL KV +  YA +  +G ++KVG + F   R+
Sbjct:  514 TPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRG-KGLGYAQYLPREQYLYTREQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQ 681          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.585e-54
Identity = 104/169 (61.54%), Postives = 128/169 (75.74%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGFPAKRR 519
            TPGF GADI+NVCNEAALIAAR  +  V   HFE AI+RVIGGLEKK +V+   E+ TVAYHE+GHAV GWFLEHA+PLLKV+I+PRG   LG+AQY+P E  L T+EQLFD  CM LGGR AEQ+  G+I+TGAQ+DL KV +  YA +  +G S+K+G + F   R+
Sbjct:  505 TPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIGGLEKKTQVLQPSEKTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRG-KGLGYAQYLPREQFLYTREQLFDRMCMMLGGRVAEQLFFGQITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQ 672          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 4.467e-49
Identity = 91/164 (55.49%), Postives = 125/164 (76.22%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGF 504
            TPGF GADIANVCNEAALIAAR +   V + HFE AI+RVIGG+E+K+K++S  E++ VAYHE+GHAV GW+L++A+PLLKV+I+PRG  ALG+AQY+P +  LLT++QL D   M+LGGR +E++    +++GA +D +KV  M  A V   G SDK+G + +
Sbjct:  552 TPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTMSLGGRVSEELHFPSVTSGASDDFKKVTSMATAMVTELGMSDKIGWVNY 715          
BLAST of EY734973 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 2.217e-48
Identity = 92/164 (56.10%), Postives = 122/164 (74.39%), Query Frame = 1
Query:   13 TPGFPGADIANVCNEAALIAARGENSQVTMEHFEAAIDRVIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQLFDMTCMTLGGRAAEQVLLGKISTGAQNDLEKVAKMTYAPVAVYGFSDKVGLLGF 504
            TPGF GADIAN CNEAALIAAR  +  +T+ HFE AI+RVI GLEKK +V+SK E+R+VAYHE+GHAV GWFL++A+PLLKV+I+PRG  ALG+AQY+P +  L+++EQ      M LGGR +E++    +++GA +D +KV +M  A V   G S K+G L F
Sbjct:  497 TPGFTGADIANACNEAALIAARHNDPYITIHHFEQAIERVIAGLEKKTRVLSKEEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFRHRMIMALGGRVSEELHFPSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSF 660          
The following BLAST results are available for this feature:
BLAST of EY734973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FTSH8_ORYSJ2.347e-8289.22Cell division protease ftsH homolog 8, mitochondri... [more]
FTSH3_ORYSJ1.165e-8189.22Cell division protease ftsH homolog 3, mitochondri... [more]
FTSH3_ARATH1.165e-8190.42Cell division protease ftsH homolog 3, mitochondri... [more]
FTSHA_ARATH2.595e-8189.22Cell division protease ftsH homolog 10, mitochondr... [more]
AFG32_HUMAN1.098e-5560.36AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]
AFG32_MOUSE2.446e-5560.36AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1... [more]
AFG32_BOVIN2.446e-5559.76AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 S... [more]
AFG31_MOUSE1.585e-5461.54AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2... [more]
RCA1_YEAST4.467e-4955.49Mitochondrial respiratory chain complexes assembly... [more]
AFG3_YEAST2.217e-4856.10Mitochondrial respiratory chain complexes assembly... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-108-H01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734973 ID=EY734973; Name=EY734973; organism=Citrus sinensis; type=EST; length=960bp
CCACGCGTCCGCACTCCTGGATTTCCTGGAGCAGACATTGCAAATGTTTG
CAATGAAGCTGCTTTGATTGCTGCAAGGGGTGAAAATTCACAAGTCACAA
TGGAACATTTTGAGGCAGCTATAGATAGGGTCATTGGTGGTCTGGAGAAG
AAGAATAAGGTTATAAGCAAGTTGGAGCGCCGGACAGTTGCTTACCATGA
ATCAGGCCATGCTGTTGCTGGATGGTTTCTGGAACATGCAGAACCCTTGT
TAAAAGTGACAATTGTTCCTCGAGGTACAGCTGCACTTGGATTTGCCCAG
TATGTCCCTAACGAGAACCTTCTTCTGACAAAGGAGCAGCTTTTTGATAT
GACGTGTATGACCCTTGGCGGTCGAGCAGCTGAGCAGGTTTTGTTGGGGA
AGATATCTACTGGAGCTCAAAATGACTTGGAGAAGGTAGCAAAGATGACC
TATGCCCCAGTTGCCGTGTATGGGTTTAGCGATAAGGTTGGGCTCTTGGG
CTTCCCCGCCAAGAGAAGACACGTTCCAAATGAGTGAGCCGTACCGCAGC
AAAGACTGGGGCGAGCCAGTAAAATGCCGAGGGGTACAAAAATGGGGTAG
AGCAAGGGCAATGTGGGACCCCCACGTTCCGAACCAAATTGCGCGGAACC
CCAGAGAAGGCCGCGCCACTCACAACCTGCCCGAGGATGTTTGCTTCAGA
AAAGGGAAAGTCTCTTCCACCACAAAAGAATGGCGCCTCACCAACATGCG
CCCGGGGAAGCACCCCCCTCAACAGCCCAGGGTGGCGCCCGCGAGTTCGG
GGAGCAGATCCCCAGGCCGGGCGGGTCGCGAGAGAAGAGGCAGGAGCCGG
GCACGCGCGGCCCGCCGAGGAACAGGGGCCGCCCGGGGGCCGTGGGCGCC
GGNCCGCTGCCCAACACACACCGAACACACGGCGACATCCCCACCACGCT
CGAGCACCGG
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