EY734145

Overview
NameEY734145
Unique NameEY734145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734145 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.167e-14
Identity = 48/140 (34.29%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  181 CKFLSVLFLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYR-MYWLCHHIHTYKKTQVALAHGITM 594
            C+ +S  F S++  N+++  +      +   +V+L E  G   ++TLNRPR LN ++  ++  +   L+KWE+D +  L+I+KG G +AF AGGD++   + RN+    L+ ++R  Y L + I + +K  +AL HGITM
Sbjct:    7 CRLMS-RFNSYKRTNIILQHLKMSNHTDAAAEVLL-ERKGCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDIRALSEARNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHGITM 144          
BLAST of EY734145 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.794e-14
Identity = 42/107 (39.25%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  280 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYR-MYWLCHHIHTYKKTQVALAHGITM 594
            VL E++G   ++TLNRP+ LN ++  ++  +   L+KW+KD    +VI+KG G +AF AGGD++   +   + +   +V +R  Y L + I TY+K  VAL +GITM
Sbjct:   34 VLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAIAEAGKAGNLLSQVFFREEYILNNTIGTYQKPYVALINGITM 140          
BLAST of EY734145 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.883e-14
Identity = 45/133 (33.83%), Postives = 77/133 (57.89%), Query Frame = 1
Query:  202 FLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSKDSCLEVVYR-MYWLCHHIHTYKKTQVALAHGITM 594
            F +F+  N ++  +      +  E+V+L E+ G   ++TLNRP+ LN ++  ++  +   L+KWE+D    L+I+KG  G+AF AGGD+++  +   +K     V +R  Y L + + + +K  VAL HGITM
Sbjct:   13 FNAFKRTNTILHHLRMSKHTDAAEEVLL-EKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITM 144          
BLAST of EY734145 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 1
Query:  298 GNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSKDSCLEVVYR-MYWLCHHIHTYKKTQVALAHGITM 594
            G   ++TLNRP+ LN ++  ++ L+   L  WE+D    LVI+KGV G+AF AGGD++   D   + D   +  +R  Y L + I TYKK  VAL  GITM
Sbjct:   43 GCAGVITLNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAVTDAGKAGDRLAQDFFREEYILNNAIGTYKKPYVALIDGITM 143          
BLAST of EY734145 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.179e-12
Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  280 VLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVG-RAFSAGGDLKMFYDGRNSKDSCLEVVYR-MYWLCHHIHTYKKTQVALAHGITM 594
            VL ++ G   ++TLNRP+ LN +S K++  +   ++ WE+D    L+I+KG G +AF AGGD++   D   + D+     +R  Y L + I T KK  VAL  GITM
Sbjct:   37 VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVRAIADAGKAGDTMTRDYFREEYRLDNAIGTCKKPYVALIDGITM 143          
BLAST of EY734145 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12
Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 1
Query:  202 FLSFESANLLID*MAQGVVKNP------DEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGVGRAFSAGGDLK----MFYDGRNSKDSCLEVVYRMYWLCHHIHTYKKTQVALAHGITM 594
            FLS  +++     M++  ++NP          VL E     R+ TLNRP+ LN I+  ++  +   L   E+ + AK++I+KG GR+FS+GGD+K       DG+           + Y L H + TY+K  VAL +GITM
Sbjct:   30 FLSLNASST----MSRAFIRNPKFYSTSSNDTVLYESKNGARIFTLNRPKVLNAINVDMIDSILPKLVSLEESNLAKVIILKGNGRSFSSGGDIKAAALSIQDGK--LPEVRHAFAQEYRLSHTLATYQKPVVALMNGITM 164          
BLAST of EY734145 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.250e-12
Identity = 45/133 (33.83%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  202 FLSFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSKDSCLEVVYR-MYWLCHHIHTYKKTQVALAHGITM 594
            F S   A++++  +     K+ +   VL E  G   ++TLNRP+ LN +S  ++  +   L+KWE+D    L+I+KG  G+AF AGGD+K   + + +  +  + ++R  Y L + I + +K  VAL  GITM
Sbjct:   13 FSSIRRASVILQHLRMS--KHTETAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITM 143          
BLAST of EY734145 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  208 SFESANLLID*MAQGVVKNPDEQVVLGEEIGNVRLVTLNRPRQLNVISSKVVSLLAEYLEKWEKDDRAKLVIVKGV-GRAFSAGGDLKMFYDGRNSKDSCLEVVYR-MYWLCHHIHTYKKTQVALAHGITM 594
            SF  A++++  +   +     E  VL E  G   ++TLNRP+ LN +S  ++  +   L+ WE+D    L+I+KG  G+AF AGGD+K   + + ++ +  + ++R  Y L + I + +K  VAL  GITM
Sbjct:   15 SFRRASVILQHLRMSMHTEAAE--VLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKARQNLTQDLFREEYILNNAIASCQKPYVALIDGITM 143          
The following BLAST results are available for this feature:
BLAST of EY734145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
HIBCH_BOVIN1.167e-1434.293-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_DANRE5.794e-1439.253-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_HUMAN9.883e-1433.833-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENTR2.434e-1242.573-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_CHICK3.179e-1239.253-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_SCHPO9.250e-1234.043-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_RAT9.250e-1233.833-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_MOUSE7.831e-1133.593-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-100-D03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734145 ID=EY734145; Name=EY734145; organism=Citrus sinensis; type=EST; length=930bp
TCCCGTGTCGACCCACGCGTCCGAAAAAAATAAAAAAAGCCTACTCATAA
CGGAGGGAGAGGGGTAGGTAGGTAGACCAAAATATGAAATACCCCGCCAT
GTGTAATAAAGCTAGCAAACTGACCAGTTGACTTCATCTTGTCTCTCTCT
TCATTGGACAGACTGTTGTTTAACAAAACCTGCAAGTTCCTCTCTGTTCT
TTTTCTTAGCTTTGAATCAGCTAACCTACTAATTGACTAAATGGCGCAAG
GTGTTGTTAAGAACCCAGATGAGCAGGTTGTTCTTGGAGAAGAAATAGGC
AATGTGAGACTGGTCACCTTAAACCGGCCTCGCCAATTGAATGTCATCTC
ATCTAAAGTGGTGTCTCTATTGGCAGAATACTTGGAAAAATGGGAAAAAG
ATGACCGAGCTAAGCTTGTAATAGTCAAGGGAGTTGGCCGAGCTTTTTCT
GCTGGTGGGGATTTGAAAATGTTTTATGATGGGAGGAACTCAAAGGATTC
CTGCCTCGAAGTGGTCTATAGAATGTATTGGCTTTGCCATCACATTCATA
CCTATAAAAAAACCCAGGTAGCTCTTGCTCATGGAATTACAATGGAGAGG
AGGCGCGTCTTTGGATGATCCTCTGAAATTCTCAGGTGTCACGGAAAAAA
CTTGTTTTTCCCCTCCAGAAACAAGGATTGGGTTTCATACTGGATTGGGG
GATTCTCATTCATCAATTCTCGTCCCCCCTGGACATTTGAAGGGAAATTC
CTGGCCTTAAACTGGGGCCAAAGGTAAAATGGCAAAGAAATTGGTTGGCA
ACTGTGGCTAACCAACACATATTTGTCCCCTCCCGAAAAAAGTTGGCCCA
ACATAAAAAAAGCTCCGTGAAGCGCTTATAAACTGGGGGCACAAAATTGT
GTGCCACAACTTCCAATTGGGAAAGATCTC
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