EY756418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: TRXM3_ARATH (Thioredoxin M-type 3, chloroplastic OS=Arabidopsis thaliana GN=At2g15570 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 1.231e-45 Identity = 95/163 (58.28%), Postives = 114/163 (69.94%), Query Frame = 2 Query: 236 CFTSAHFAIPRVSSFPSPTPNKLSFSSH---FYAKNATFKAPNRSLSLKILCVRESRAV-VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGLKS 712 CF F R S PS SFS F + + + L L LCVR+SRA VT+ SWE S+L S+TPVLVEFY SWCGPCRMVHR+IDEIAG+YAG+L C+++N D DL +AE+YEIKAVPVVLLFKNGEKRE+++GTMP YI+AIER L S Sbjct: 11 CFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVLNS 173
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.848e-25 Identity = 50/104 (48.08%), Postives = 73/104 (70.19%), Query Frame = 2 Query: 401 VVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGLKS 712 V + +W+ +L S+ PVLVEF+A WCGPCRM+ VIDE+A EY G+++C VNTD IA +Y I+++P VL+FKNGEK+E+V+G +P I++ + S Sbjct: 69 VADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYVSS 172
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.117e-25 Identity = 46/100 (46.00%), Postives = 72/100 (72.00%), Query Frame = 2 Query: 401 VVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIER 700 VV SW++ ++ S+TPVLV+F+A WCGPCRM+ +IDE+A EYAG+++C+ +NTD A Y I+++P VL FKNGE++++V+G +P +E+ Sbjct: 71 VVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEK 170
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 3.485e-24 Identity = 49/120 (40.83%), Postives = 77/120 (64.17%), Query Frame = 2 Query: 347 APNRSLSLKILCVRESRAVVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGL 706 AP RS+ VR V D+++ +L S PVLV+F+A WCGPCR++ V+DEIAGEY +L+C +NTD +A +Y I+++P +++FK G+K ET++G +P + +E+ L Sbjct: 25 APRRSV-----VVRAEAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.324e-23 Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 2 Query: 401 VVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGLKS 712 V + +W+ ++ +TPVLVEF+A WCGPCRM+ VIDE+A +YAG++ C VNTD +A Y I+++P VL+FK GEK+E+V+G +P I++ + S Sbjct: 63 VADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYIGS 166
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.854e-23 Identity = 53/145 (36.55%), Postives = 88/145 (60.69%), Query Frame = 2 Query: 287 PTPNKLSFSSHFYAKNATFKAPNRSLSLKILCVRESRAV-----VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGL 706 PT L S + + + +P + ++C + S AV V SW++ +L S+ PV+V+F+A WCGPC+++ VIDE+A EY+G++ + +NTD IA Y I+++P VL FKNGE++E+++G +P +IE+ L Sbjct: 36 PTFRGLKRSFPALSSSVSSSSPRQFRYSSVVC-KASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 179
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.033e-23 Identity = 46/104 (44.23%), Postives = 72/104 (69.23%), Query Frame = 2 Query: 401 VVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGLKS 712 V + +W+ ++ ++PVLVEF+A WCGPCRM+ VIDE+A +Y G+++C VNTD IA Y I+++P VL+FK+GEK+E+V+G +P I++ + S Sbjct: 72 VADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYIGS 175
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M-type 4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 5.033e-23 Identity = 43/101 (42.57%), Postives = 69/101 (68.32%), Query Frame = 2 Query: 404 VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGL 706 ++ W+ +L SD PVLVEF+A WCGPCRM+H ++D++A ++AG+ + + +NTD A Y I++VP V++FK GEK+++++G +P IER L Sbjct: 91 LSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: THIO_GRIPA (Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.114e-21 Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 2 Query: 404 VTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGLKS 712 V S+ + ++NS PVLV+F+A WCGPCRM+ IDEIA +Y +L+ VNTD + TIA +Y I+++P V++F NG+K +TVVG +P + +++ LKS Sbjct: 6 VIDTSFHEEVINSRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNPTIATEYGIRSIPTVMIFINGKKVDTVVGAVPKLTLLNTLQKHLKS 108
BLAST of EY756418 vs. ExPASy Swiss-Prot
Match: THIO1_ANASP (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=trxA PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.114e-21 Identity = 45/103 (43.69%), Postives = 71/103 (68.93%), Query Frame = 2 Query: 398 AVVTKDSWEKSILNSDTPVLVEFYASWCGPCRMVHRVIDEIAGEYAGRLRCFMVNTDTDLTIAEDYEIKAVPVVLLFKNGEKRETVVGTMPXGVYIAAIERGL 706 A VT ++++ +L+SD PVLV+F+A WCGPCRMV V+DEIA +Y G+++ VNTD + +A Y I+++P +++FK G+K + VVG +P +E+ L Sbjct: 5 AQVTDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107 The following BLAST results are available for this feature:
BLAST of EY756418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756418 ID=EY756418; Name=EY756418; organism=Citrus sinensis; type=EST; length=906bpback to top |