EY756337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756337 vs. ExPASy Swiss-Prot
Match: ARFR_ORYSJ (Auxin response factor 18 OS=Oryza sativa subsp. japonica GN=ARF18 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.579e-42 Identity = 99/205 (48.29%), Postives = 130/205 (63.41%), Query Frame = 3 Query: 12 KLQSSLFPLGFQQLEHTTRPARVSSANFMSETGNSKNISCLLTMGNPTQSFKDNIEVKTPHIILFGQLILPQQNSSQSCSGDTIVN-SLSDGNPEKTA--ISSDGSGSAVHQNGPLENSSDEGSPWCKDHKKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSNVLYRDAAGSVNTLEMSPSVSF 617 KLQSSL P G QL+H +P R+++ + +ISCLLT+G+P + K + + ++LFG+ IL +Q S + V S SDGN E T +SD S +QNG +N S G P C+D+K D+GLE GHCKVFM+SEDVGRTLDLSV+GSYEELY +LA+MFGIE AE+ S+V YRDAAG++ P F Sbjct: 477 KLQSSLSPHGLHQLDHGMQP-RIAAGLIIGHPAARDDISCLLTIGSPQNNKKSDGKKAPAQLMLFGKPILTEQQISLGDAASVDVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTTDNLSCGGVPLCQDNKVLDVGLETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMSHVFYRDAAGALKHTGDEPFSEF 680
BLAST of EY756337 vs. ExPASy Swiss-Prot
Match: ARFV_ORYSJ (Auxin response factor 22 OS=Oryza sativa subsp. japonica GN=ARF22 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 8.453e-42 Identity = 93/197 (47.21%), Postives = 122/197 (61.93%), Query Frame = 3 Query: 12 KLQSSLFPLG-FQQLEHTTRPARVSSANFMSETGNSKNISCLLTMGNPTQSFKDNIEVKTPHIILFGQLILPQQNSSQSCSGDTIV-----NSLSDGNPEKTAISSDGSGSAVHQNGPLENSSDEGSPWCKDHKKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSNVLYRDAAGSV 584 KL L G F +L+ T P+R+S +S NISCLL++ P + K + TPHI+LFG+ I +Q + S S +T+ NS +GN KT +SDGSGS++ S +G H+ SDLGLE GHCKVFMESEDVGRT+DLSV GSYEELYG+LA+MFGIE E+ +++ +RDAAG V Sbjct: 473 KLHLGLLHSGSFNRLDAITPPSRISKGFVVSSAPAHDNISCLLSISTPQVAEKSDDRKTTPHIMLFGKAIFTEQQITSSGSTETLSPGVTGNSSPNGNAHKTGNASDGSGSSI-----CIGFSSQG------HEASDLGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGRLADMFGIEKEEIINHLHFRDAAGVV 658 HSP 2 Score: 33.113 bits (74), Expect = 8.453e-42 Identity = 13/20 (65.00%), Postives = 17/20 (85.00%), Query Frame = 2 Query: 587 HTGDEPFSEFLKTARRLTIL 646 H G+ PFS+F+K ARRLTI+ Sbjct: 660 HPGEVPFSDFMKAARRLTII 679
BLAST of EY756337 vs. ExPASy Swiss-Prot
Match: ARFP_ARATH (Auxin response factor 16 OS=Arabidopsis thaliana GN=ARF16 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.628e-33 Identity = 91/176 (51.70%), Postives = 108/176 (61.36%), Query Frame = 3 Query: 102 ETGNSKNISCLLTMGN-PTQSFKDNIEVKTPHIILFGQLILPQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLE---NSSDEGSPWCKDHKKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSNVLYRDAAGSVNTLEMSPSVSF 617 +T N K C LTMG P K K HI+LFG+LILP++ S+ S DT N EKT ISS GS +QNG +SSDEGSP C GLE GHCKVFMES+DVGRTLDLSVLGSYEEL KL++MFGI+ +EM S+VLYRDA+G++ P F Sbjct: 492 DTKNEKGF-CFLTMGTTPCNDTKS----KKSHIVLFGKLILPEEQLSEKGSTDT-------ANIEKTQISSGGS----NQNGVAGREFSSSDEGSP-CSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEMLSSVLYRDASGAIKYAGNEPFSEF 650
BLAST of EY756337 vs. ExPASy Swiss-Prot
Match: ARFH_ORYSJ (Auxin response factor 8 OS=Oryza sativa subsp. japonica GN=ARF8 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.430e-27 Identity = 85/208 (40.87%), Postives = 116/208 (55.77%), Query Frame = 3 Query: 15 LQSSLFPLGFQQLEH----TTRPARVSSANFMSETGNSKNISCLLTMGNPTQSFKDNIEVKTPHIILFGQLILPQQNSSQS--CSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLENSSDEGSPWCKDHKK-SDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSNVLYRDAAGSVNTLEMSPSVSF 617 LQSSL G ++ +H + P R+S+ M + ++ +S K + K P ++LFGQ IL ++ S S S NS + N EK A S+GSGS V QN P +N+S E W +++ S+LGLE G CKVF+ES+ VGR LDLS L S+E+LYG+L+ MF I+SAE+ S VLYR A G V P F Sbjct: 465 LQSSLMYPGLRRPDHVGPTSIPPPRISTDLTMGSSPPARALS---------MGAKKPDDAKPPGLMLFGQRILTERQMSLSGTTSPAATGNSSLNWNTEKGA--SEGSGSGVIQNSPTDNTSSERLQWFRENSTVSELGLEPGQCKVFIESDTVGRNLDLSSLASFEQLYGRLSEMFCIDSAELRSRVLYRGATGEVRHAGDEPFSEF 661
BLAST of EY756337 vs. ExPASy Swiss-Prot
Match: ARFJ_ARATH (Auxin response factor 10 OS=Arabidopsis thaliana GN=ARF10 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.124e-27 Identity = 83/222 (37.39%), Postives = 107/222 (48.20%), Query Frame = 3 Query: 45 QQLEHTTRPARVSSANFMSETGNSK---------------------------NISCLLTMGNP--TQSFKDNI-EVKTPHIILFGQLILPQQNSSQSCSGDTIVNSLSDGNPEKTAISSDGSGSAVHQNGPLENSSDEGSPWCKDHKKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIES-AEMFSNVLYRDAAGSVNTLEMSPSVSF 617 QQL + P+ +S N S TGN+K NISC LTMGNP Q K ++ VKT +LFGQ IL +Q Q + + ++ EK ++ G W S GLE GHCKVFMESEDVGRTLDLSV+GSY+ELY KLA MF IE +++ ++V+YRDA G + + P F Sbjct: 452 QQLFGSPSPSLLSDLNLSSYTGNNKLHSPAMFLSSFNPRHHHYQARDSENSNNISCSLTMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQ---QVMNRKRFLEEEAEAEEEKGLVA-------------------RGLTW----NYSLQGLETGHCKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLTHVVYRDANGVIKRIGDEPFSDF 647 HSP 2 Score: 31.187 bits (69), Expect = 4.124e-27 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 593 GDEPFSEFLKTARRLTI 643 GDEPFS+F+K +RLTI Sbjct: 640 GDEPFSDFMKATKRLTI 656
BLAST of EY756337 vs. ExPASy Swiss-Prot
Match: ARFJ_ORYSJ (Auxin response factor 10 OS=Oryza sativa subsp. japonica GN=ARF10 PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 1.213e-18 Identity = 70/197 (35.53%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 66 RPARV--SSANFMSETGNSKNISCLLTMGNPTQSFKDNIEVKTPHIILFGQLILPQQNSSQSCSGDTIVNSLSDGNP-------EKTAISSDGSGSAVHQNGPLENSSDEGS-PWCKDH---KKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSNVLYRDAAGSVNTLEMSPSVSF 617 RP R+ S+ + G + +C +P+ K + K +LFGQ IL ++ I N SDG P EK +S+GS S V Q P +N++ S P+ + + S+ L G CKVF+ESE VGR+LDLS L S+EELY L++MF I S E+ S+++YR AG V P +F Sbjct: 497 RPPRIIISTDLTIGSPGKPDDAAC-----SPSSGGKKIDDTKPRGFLLFGQAILTEEQ---------IKNGNSDGRPASPNWDAEKAPNTSEGSDSGVTQGSPTKNTTPSWSLPYFGGNNISRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSIGSDELRSHLVYRSPAGEVKHAGDEPFCAF 679
BLAST of EY756337 vs. ExPASy Swiss-Prot
Match: ARFJ_ORYSI (Auxin responsive factor 10 OS=Oryza sativa subsp. indica GN=ARF10 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.213e-18 Identity = 70/197 (35.53%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 66 RPARV--SSANFMSETGNSKNISCLLTMGNPTQSFKDNIEVKTPHIILFGQLILPQQNSSQSCSGDTIVNSLSDGNP-------EKTAISSDGSGSAVHQNGPLENSSDEGS-PWCKDH---KKSDLGLEMGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFGIESAEMFSNVLYRDAAGSVNTLEMSPSVSF 617 RP R+ S+ + G + +C +P+ K + K +LFGQ IL ++ I N SDG P EK +S+GS S V Q P +N++ S P+ + + S+ L G CKVF+ESE VGR+LDLS L S+EELY L++MF I S E+ S+++YR AG V P +F Sbjct: 497 RPPRIIISTDLTIGSPGKPDDAAC-----SPSSGGKKIDDTKPRGFLLFGQAILTEEQ---------IKNGNSDGRPASPNWDAEKAPNTSEGSDSGVTQGSPTKNTTPSWSLPYFGGNNISRASEYELNPGQCKVFVESETVGRSLDLSALSSFEELYACLSDMFSIGSDELRSHLVYRSPAGEVKHAGDEPFCAF 679 The following BLAST results are available for this feature:
BLAST of EY756337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY756337 ID=EY756337; Name=EY756337; organism=Citrus sinensis; type=EST; length=875bpback to top |