EY756326

Overview
NameEY756326
Unique NameEY756326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756326_ssr298 microsatellite EY756326_ssr298:298..307. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_ARATH (Protein Dom3z homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g17620 PE=1 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 3.779e-92
Identity = 158/206 (76.70%), Postives = 177/206 (85.92%), Query Frame = 1
Query:    7 VRKVQETPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRRFYVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKMKNYWQGGVCLAFADXVLCWLYGTVKENEDYTLHF*STINRLELLXASSCPEXITLHVEQLQ 624
            V K+ E P+S+LDRRRCYWGYCFESLATEDP RA GE IHH+DANVEFC+V++TKLGAHR++MGAEMDCCD +D G+RFYVELKT+RELD  T +RFEREKLLKFWIQSF+AGVP+IVVGFRDD GRLVRTERL T+DI HR ++KNYWQGGVCLAFAD VLCWLYGTVKENEDY L F     RLELL A SCP+ IT HV  LQ
Sbjct:  329 VHKLPERPQSDLDRRRCYWGYCFESLATEDPGRAYGEEIHHVDANVEFCSVVRTKLGAHRVMMGAEMDCCDVSDKGKRFYVELKTTRELDDRTVDRFEREKLLKFWIQSFVAGVPYIVVGFRDDGGRLVRTERLTTRDIAHRARLKNYWQGGVCLAFADEVLCWLYGTVKENEDYILQFVHPFMRLELLQAQSCPDAITNHVHLLQ 534          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_EMENI (Protein rai1 OS=Emericella nidulans GN=rai1 PE=3 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.977e-24
Identity = 69/174 (39.66%), Postives = 102/174 (58.62%), Query Frame = 1
Query:   58 YWGYCFESLAT-----EDPRRADGEGIHH--IDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRRF----YVELKTSRELDYHTEE-RFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM--KNYWQGGVCLAFADXVLCWLYGTVKENEDYTL 537
            YWGY FE+++      ++  R + EG  +  ++ N ++C+V++T +G  +L++G E+D    +   R+     +VELKTS E+    +  +FER KLLKFW QSFL GVP IVVGFRD  G L R E L T +I +RV+   +  W G +C+ FA   L WL   +KE   + L
Sbjct:  151 YWGYKFETISVLDKTWDEASREEIEGRENLVVNNNAQYCSVVRTGIGRTKLVLGGEVDAIWDSKPERKEDPINWVELKTSAEIRKDWDMVKFER-KLLKFWAQSFLLGVPKIVVGFRDQGGILRRLEELETANIPNRVRKSGRGTWDGNICINFAATFLEWLKSVIKEGGTWRL 323          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_ASPFU (Protein rai1 OS=Aspergillus fumigatus GN=rai1 PE=3 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24
Identity = 68/167 (40.72%), Postives = 95/167 (56.89%), Query Frame = 1
Query:   58 YWGYCFESLATE----DPR-RADGEGIHH--IDANVEFCAVMKTKLGAHRLLMGAEMD----CCDSTDDGRRFYVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM--KNYWQGGVCLAFADXVLCWLYGTVKE 519
            YWGY FE+L       DP  RA+ E      ++ N ++C+V++T +G+ RL++G E+D    C     +    +VELKTS E+    +      KLLKFW QSFL GVP I+VGFRD+ G + R E L T  I ++VK   +  W G +C+ FA   L WL  T+KE
Sbjct:  159 YWGYKFETLCLLQQPWDPTPRAEIESREDLVVNNNAQYCSVVRTGIGSTRLIIGGEVDAVWDCKPDRKEDPINWVELKTSAEIRNDRDMIKYERKLLKFWAQSFLLGVPKIIVGFRDNHGIVHRLEELETASIPNKVKKLGRGTWDGNICINFAAAFLEWLKSTIKE 325          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_XENLA (Protein Dom3Z OS=Xenopus laevis GN=dom3z PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.384e-22
Identity = 61/165 (36.97%), Postives = 90/165 (54.55%), Query Frame = 1
Query:   49 RRCYWGYCFES-LATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGR---RFYVELKTSREL-DYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVK-MKNYWQGGVCLAFADXVLCWLYGTVKENE 525
            R  Y GY FES +  + P R   +    ++ N  FC+V+  +L +H LL+  E+DC D +         Y+ELK+S ++ + H +  F R KLLK+W QSFL G+P IV GFR   GR+V  E  +T DI H V+  +N W   VC+ F +  L  +   V  ++
Sbjct:  201 RLMYSGYKFESYICADSPDRQPSQSAV-VNTNEGFCSVLLARLTSHSLLISGEVDCTDPSAKKSIPPTCYIELKSSAQIRNPHQQRSFNRYKLLKWWCQSFLLGIPIIVAGFRSPEGRIVSLETFKTSDIPHLVRGERNSWDPAVCMNFCNKFLSHIKSVVTRDD 364          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_HUMAN (Protein Dom3Z OS=Homo sapiens GN=DOM3Z PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20
Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 1
Query:   13 KVQETPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRR---FYVELKTSRELDYHTEER-FEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM-KNYWQGGVCLAFADXVLCWLYGTVKENEDYTLH 540
            + Q   +  L R   Y GY FE     D   +  +    ++ NV FC+V++++LG+H LL   E+DC D      +    YVELKTS+E+    + R F R KLLK+W QSFL GVP +V GFR+  G +   +   T  +   V+  ++ W   VC+ F    L +   TV +++   +H
Sbjct:  171 RAQRLARPPLLRELMYMGYKFEQYMCADKPGSSPDPSGEVNTNVAFCSVLRSRLGSHPLLFSGEVDCTDPQAPSTQPPTCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPNVVAGFRNPDGFVSSLKTFPTMKMFEYVRNDRDGWNPSVCMNFCAAFLSFAQSTVVQDDPRLVH 351          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_RAT (Protein Dom3Z OS=Rattus norvegicus GN=Dom3z PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.732e-20
Identity = 60/181 (33.15%), Postives = 92/181 (50.83%), Query Frame = 1
Query:   13 KVQETPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRR---FYVELKTSRELDYHTEER-FEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM-KNYWQGGVCLAFADXVLCWLYGTVKENEDYTLH 540
            + Q   +  L R   Y GY FE     D      +    ++ NV FC+V++++LG H LL   E+DC +      +    YVELKTS+E+    + R F R KLLK+W QSFL GVP++V GFR+  G +   +   T ++   V+  +  W   VC+ F    L +   TV +++   +H
Sbjct:  171 RAQRLARPPLLRELMYMGYKFEQYMCADKPGGSPDPSGEVNTNVAFCSVLRSRLGNHPLLFSGEVDCLNPQAPCTQPPSCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPYVVAGFRNPEGFVCSLKTFPTMEMFENVRNDQEGWNPSVCMNFCAAFLSFAQSTVVQDDPRLVH 351          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_BOVIN (Protein Dom3Z OS=Bos taurus GN=DOM3Z PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.582e-20
Identity = 59/176 (33.52%), Postives = 90/176 (51.14%), Query Frame = 1
Query:   13 KVQETPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRR---FYVELKTSRELDYHTE-ERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM-KNYWQGGVCLAFADXVLCWLYGTVKENE 525
            +VQ   +  L R   Y GY FE     D      +    ++ NV FC+V++++LG H LL   E+DC D      +    YVELKTS+E+    + + F R KLLK+W QSFL GVP +V GFR+  G +   +   T ++   V+  ++ W   VC+ F    L +   T  +++
Sbjct:  171 RVQRLTRPPLLRELMYMGYKFEQYMCADKPGVSPDPSGEVNTNVAFCSVLRSRLGNHPLLFSGEVDCTDPQAPSTQPPTCYVELKTSKEMHSPGQWKSFYRHKLLKWWAQSFLPGVPNVVAGFRNPEGFVCSLKTFPTMEMFEYVRNDRDGWNPSVCMNFCAAFLSFAQNTAVQDD 346          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_MOUSE (Protein Dom3Z OS=Mus musculus GN=Dom3z PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20
Identity = 59/181 (32.60%), Postives = 90/181 (49.72%), Query Frame = 1
Query:   13 KVQETPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCD---STDDGRRFYVELKTSRELDYHTEER-FEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM-KNYWQGGVCLAFADXVLCWLYGTVKENEDYTLH 540
            + Q   +  L R   Y GY FE     D      +    ++ NV +C+V++++LG H LL   E+DC +           YVELKTS+E+    + R F R KLLK+W QSFL GVP +V GFR+  G +   +   T ++   V+  +  W   VC+ F    L +   TV +++   +H
Sbjct:  171 RAQRLARPPLLRELMYMGYKFEQYMCADKPGGSPDPSGEVNTNVAYCSVLRSRLGNHPLLFSGEVDCLNPQAPCTQPPSCYVELKTSKEMHSPGQWRSFYRHKLLKWWAQSFLPGVPHVVAGFRNPEGFVCSLKTFPTMEMFENVRNDREGWNPSVCMNFCAAFLSFAQSTVVQDDPRLVH 351          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_NEUCR (Protein rai-1 OS=Neurospora crassa GN=rai-1 PE=3 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.466e-19
Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = 1
Query:   58 YWGYCFESLAT-------EDPRRADGEGIHHIDANVEFCAVMKTKLGAHRLLMGAEMDCCDSTDDGRRF------YVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVKM--KNYWQGGVCLAFADXVLCWLYGTVKE 519
            YWGY FE+L+T             +    H ++   ++C+V++T +G   L +G E+D     DD  R       +VELKTS  +    +      KL+KFWIQSFL GVP I+VGFR   G LV T+  RT +I   VK   +  W G  C+ FA+  L WL  T+ +
Sbjct:  161 YWGYKFETLSTLPKPWGQTSRDFIESRPDHVVNNKEQYCSVVRTGIGKTILCIGGEVDAI--WDDKPRTQGDPINWVELKTSAVIQNERQANNFERKLMKFWIQSFLLGVPKIIVGFRTQDGLLVETKEFRTMEIPLMVKKNGRPKWDGDTCVNFANGFLEWLRHTITD 327          
BLAST of EY756326 vs. ExPASy Swiss-Prot
Match: DOM3Z_SCHPO (Protein din1 OS=Schizosaccharomyces pombe GN=din1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.792e-17
Identity = 67/210 (31.90%), Postives = 100/210 (47.62%), Query Frame = 1
Query:   10 RKVQETPKSELDRRRCYWGYCFESLATEDPRRADGEGIHHIDA--------NVEFCAVMKTKLGAHRLLMGAEMDC------CDS------TDDG------------RRFYVELKTSRELDYHTEERFEREKLLKFWIQSFLAGVPFIVVGFRDDAGRLVRTERLRTKDITHRVK---MKNYWQGGVCLAFADXVLCWLYGTVKENEDYT 534
            R   ET  +  DR  CYWGY FE+++T  P   D      I+         + ++C+++K  +G  +L++  E+DC      C +      +DDG               YVELKTS++  Y  E    R+KLLK+W QSFL G+  I++GFRDD G L+  + L T  I   ++     N W     L   +  L W+  TVK++   T
Sbjct:  129 RTRSETSYANQDRM-CYWGYKFEAISTL-PEIWDACSRDQIEQRDNQDVVPDEQYCSIVKINIGKSKLILAGEVDCIWDKKPCSAKESDVHSDDGTIEEDASNAENPNLHYVELKTSKK--YPLENYGMRKKLLKYWAQSFLLGIGRIIIGFRDDNGILIEMKELFTHQIPKMLRPYFKPNDWTPNRLLVVLEHALEWIKQTVKQHPPST 334          
The following BLAST results are available for this feature:
BLAST of EY756326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DOM3Z_ARATH3.779e-9276.70Protein Dom3z homolog, chloroplastic OS=Arabidopsi... [more]
DOM3Z_EMENI1.977e-2439.66Protein rai1 OS=Emericella nidulans GN=rai1 PE=3 S... [more]
DOM3Z_ASPFU9.812e-2440.72Protein rai1 OS=Aspergillus fumigatus GN=rai1 PE=3... [more]
DOM3Z_XENLA5.384e-2236.97Protein Dom3Z OS=Xenopus laevis GN=dom3z PE=2 SV=1[more]
DOM3Z_HUMAN1.326e-2033.70Protein Dom3Z OS=Homo sapiens GN=DOM3Z PE=1 SV=2[more]
DOM3Z_RAT1.732e-2033.15Protein Dom3Z OS=Rattus norvegicus GN=Dom3z PE=2 S... [more]
DOM3Z_BOVIN6.582e-2033.52Protein Dom3Z OS=Bos taurus GN=DOM3Z PE=2 SV=1[more]
DOM3Z_MOUSE8.596e-2032.60Protein Dom3Z OS=Mus musculus GN=Dom3z PE=1 SV=2[more]
DOM3Z_NEUCR1.466e-1936.69Protein rai-1 OS=Neurospora crassa GN=rai-1 PE=3 S... [more]
DOM3Z_SCHPO1.792e-1731.90Protein din1 OS=Schizosaccharomyces pombe GN=din1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-007-D01-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756326 ID=EY756326; Name=EY756326; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGCAAAGTACAAGAAACGCCAAAAAGTGAGTTGGATCGCCG
AAGATGTTACTGGGGTTATTGTTTCGAGAGCCTTGCCACTGAAGATCCTA
GAAGAGCTGACGGAGAAGGGATACATCATATTGATGCCAATGTTGAATTC
TGTGCTGTGATGAAAACCAAATTAGGGGCTCATCGTCTTTTGATGGGTGC
TGAAATGGATTGCTGTGACTCAACTGATGATGGAAGGAGGTTTTATGTGG
AGTTAAAGACAAGTCGTGAGCTGGATTATCATACTGAAGAAAGATTTGAG
AGAGAGAAACTGCTCAAGTTTTGGATTCAATCTTTCCTGGCTGGTGTTCC
ATTTATCGTTGTTGGATTTAGGGATGATGCAGGTCGACTTGTTCGTACAG
AGAGACTAAGAACCAAAGATATTACTCACAGAGTGAAAATGAAGAATTAT
TGGCAGGGTGGAGTTTGTTTGGCATTTGCCGATGANGTATTATGCTGGCT
CTATGGAACAGTAAAAGAAAATGAAGATTACACATTGCATTTTTAATCCA
CCATCAACCGACTGGAGCTTCTACNAGCCTCTTCTTGCCCAGAGNTCATT
ACTTTGCACGTCGAGCAATTACAAAAATATTAGATACTTGACTTGATGAT
ACCTTCATAATGAAATAACAGATACGAGGGGAGTTATAATGGAATACCGG
AATGAAAGGGGGTAGTTTAAATATGTGTGGATCAGGATACTTGCTCCAAA
AAGCTGGTGGAATTTGAAAAAAAAGACTGTGCACTTGGAAATTACATTTT
GGCCAGCCAGGCTTGTAGCTACCCCAAAAATAGTTGGGGGGCAATTGCAC
ACAATGAATGGGGATCTTGTTCCTCTACCAGACAT
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