EY756213

Overview
NameEY756213
Unique NameEY756213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756213_ssr258 microsatellite EY756213_ssr258:258..269. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7925 contig Csv1_Contig7925:789..1278. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.310e-22
Identity = 51/74 (68.92%), Postives = 58/74 (78.38%), Query Frame = 1
Query:   13 NKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 234
            N YFSNL+  +GLLQSDQELFST GA T AIV +F  NQ AFF++FV SMI MGN+ PLTG+ GEIR NCRR N
Sbjct:  254 NNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNCRRPN 327          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.448e-21
Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 1
Query:   13 NKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 234
            ++Y++NLR  KGL+QSDQELFSTPGADT  +V  +  + + FF+ F+ +MIRMGNL+PLTG QGEIR NCR VN
Sbjct:  260 SQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNQYSSDMSVFFRAFIDAMIRMGNLRPLTGTQGEIRQNCRVVN 333          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.470e-21
Identity = 53/92 (57.61%), Postives = 64/92 (69.57%), Query Frame = 1
Query:   16 KYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNIATRSSSSEGDLVSS 291
            +Y++NLR  KGL+QSDQELFSTPGADT  +V  +  N  AFF  FV +MIRMGNL+PLTG QGEIR NCR VN       R   ++  +VSS
Sbjct:  261 QYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVNSR----IRGMENDDGVVSS 348          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.226e-21
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 1
Query:   13 NKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGN 240
            N YF+NL+   GLLQSDQELFST G+ T AIV  F  NQ  FF+ F  SMI MGN+ PLTG+ GEIRL+C++VNG+
Sbjct:  260 NNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVNGS 335          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.601e-20
Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 1
Query:   13 NKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 234
            N++++NLR  KGL+QSDQELFSTPGADT  +V  +  N  +FF  F  +MIRMGNL+PLTG QGEIR NCR VN
Sbjct:  231 NQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVN 304          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.731e-20
Identity = 49/90 (54.44%), Postives = 61/90 (67.78%), Query Frame = 1
Query:   13 NKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNIATRSSSSEGDL 282
            N YF+NL+   GLLQSDQELFS  G+ T  IV  F  NQ  FF+ FV SMI+MGN+ PLTG+ GEIR +C+ VNG S     S++  GD+
Sbjct:  261 NNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVNGQS-----SATEAGDI 345          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.566e-20
Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 1
Query:   13 NKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGN 240
            N YF+NL+   GLLQSDQELFST G+ T A+V  F  NQ  FF+ F  SMI MGN+ PLTG+ GEIRL+C++V+G+
Sbjct:  230 NNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVDGS 305          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.945e-20
Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 1
Query:   16 KYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 234
            +Y++NL   KGL+QSDQ LFSTPGADT  +V  +  N   FF  FV +MIRMGNLKPLTG QGEIR NCR VN
Sbjct:  261 QYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.355e-19
Identity = 48/78 (61.54%), Postives = 56/78 (71.79%), Query Frame = 1
Query:   13 NKYFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 243
            NKY+ NL+ +KGL+QSDQELFS+P A DT  +V  F      FF  FV +M RMGN+ PLTG QGEIRLNCR VN NS
Sbjct:  259 NKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNS 336          
BLAST of EY756213 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.770e-19
Identity = 47/78 (60.26%), Postives = 56/78 (71.79%), Query Frame = 1
Query:   13 NKYFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNS 243
            NKY+ NL  +KGL+QSDQELFS+P A DT  +V  F  +   FF  FV +M RMGN+ PLTG QG+IRLNCR VN NS
Sbjct:  261 NKYYVNLEEQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNS 338          
The following BLAST results are available for this feature:
BLAST of EY756213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
PER15_IPOBA1.310e-2268.92Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER22_ARATH1.448e-2162.16Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER3_ARMRU2.470e-2157.61Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER53_ARATH3.226e-2161.84Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PERE5_ARMRU1.601e-2063.51Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER54_ARATH2.731e-2054.44Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PERA2_ARMRU3.566e-2059.21Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER23_ARATH7.945e-2064.38Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER1B_ARMRU1.355e-1961.54Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1A_ARMRU1.770e-1960.26Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756213 ID=EY756213; Name=EY756213; organism=Citrus sinensis; type=EST; length=490bp
CCACGCGTCCGCAACAAATACTTCTCCAATCTTAGAGGCCGCAAAGGCCT
TCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCTGGTGCCGATACCGCTG
CCATTGTCGAGGACTTTGGGAGGAACCAGAATGCTTTCTTTAAAAACTTT
GTGACCTCAATGATAAGAATGGGAAATTTGAAACCACTGACAGGAAATCA
AGGGGAGATTAGATTGAACTGCAGGAGGGTCAATGGAAACAGTAATATTG
CAACAAGATCATCATCATCAGAGGGTGATTTGGTCAGCTCTTTCTAAATA
AGCTAGCTTGCAGCATATGCGCGAGAGTTTTTGTGCTTAACAAACTCAAA
TTTAATCTGATCGTTTTGCCTGAAACATGTTATGTACTTTCAAATAAATT
AACGATCAAACTTGAGTTTAATCTAATGGTCTTGTCTGAAAGATGTTATG
TATTTTCAAATAGATTAATTAAACTTNTTGTTTGTGTGTT
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