EY756207

Overview
NameEY756207
Unique NameEY756207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length361
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7725 contig Csv1_Contig7725:906..1266. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.118e-25
Identity = 54/57 (94.74%), Postives = 57/57 (100.00%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 183
            KNTSSSTGKITLSVT+SKPETGEVIGVFES+QPSDTD+GAKVPKDVKIQGIWYAQLE
Sbjct:  276 KNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.008e-23
Identity = 52/57 (91.23%), Postives = 56/57 (98.25%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 183
            KNT+S TGKITLSVT+SKPETGEVIGVFES+QPSDTD+GAKVPKDVKIQGIWYAQLE
Sbjct:  273 KNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.933e-23
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 183
            K+ SSSTGKITLSVTKSKPETGEVIGVFES+QPSDTD+G+K PKDVKIQGIWYAQLE
Sbjct:  273 KDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.115e-22
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 183
            KNT++S G+ITL VTKSKPETGEVIGVFESLQPSDTD+GAKVPKDVKIQG+WY QLE
Sbjct:  276 KNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.483e-22
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLEQ 186
            KN +SS G ITLSVT SKPETGEVIGVF+SLQPSDTD+GAKVPKDVKI+G+WYAQLEQ
Sbjct:  274 KNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLEQ 331          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.483e-22
Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 183
            KNT++S G+ITL +TKSKPETGEVIGVFESLQPSDTD+GAKVPKDVKIQG+WY Q+E
Sbjct:  275 KNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.532e-22
Identity = 48/57 (84.21%), Postives = 53/57 (92.98%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 183
            KNT+S TGKIT +VTKS P+TGEVIGVFES+QPSDTD+GAK PKDVKIQGIWYAQLE
Sbjct:  276 KNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.232e-21
Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 183
            K+ +SS GKITLSVT++KPETGEVIGVFES+QPSDTD+GAK PKDVKIQG+WYAQLE
Sbjct:  272 KSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.324e-20
Identity = 49/57 (85.96%), Postives = 52/57 (91.23%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQLE 183
            KN SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTD+ A  PKDVKIQG+WYAQLE
Sbjct:  269 KNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLEA--PKDVKIQGVWYAQLE 323          
BLAST of EY756207 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.724e-15
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 1
Query:   13 KNTSSSTGKITLSVTKSKPETGEVIGVFESLQPSDTDMGAKVPKDVKIQGIWYAQL 180
            K+T++S G I   V K   ETGE+ GVFES+QPSDTD+GAKVPKD+K  G+WYAQ+
Sbjct:  279 KSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334          
The following BLAST results are available for this feature:
BLAST of EY756207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PSBO_TOBAC9.118e-2594.74Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC1.008e-2391.23Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_FRIAG2.933e-2389.47Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH1.115e-2285.96Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO_SPIOL2.483e-2284.48Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO2_ARATH2.483e-2282.46Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_SOLTU5.532e-2284.21Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_PEA1.232e-2182.46Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_WHEAT2.324e-2085.96Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_EUGGR1.724e-1562.50Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-H05-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756207 ID=EY756207; Name=EY756207; organism=Citrus sinensis; type=EST; length=361bp
CCACGCGTCCGCAAGAATACTTCATCTTCAACAGGGAAGATCACCCTCAG
CGTTACCAAGAGCAAGCCTGAGACTGGAGAGGTTATTGGAGTGTTTGAGA
GCCTTCAGCCATCTGATACTGATATGGGAGCCAAGGTTCCAAAGGATGTT
AAGATCCAGGGTATCTGGTATGCACAGCTTGAGCAATAGAGCTTTTCTTG
TATGAGTGTACTTATTCCTATTCAGATTTTGAAACATGTTGAAGGTGTTG
CTAAACATTTCTGTAATTCAATTTAGTAGCACTGAGAATGTTGTCATGTC
TGTATATTATCGTGGCATGCTATAATAATGCTTGCAATTCTGAAAAAAAA
AAAAAAAAAAA
back to top