EY756203

Overview
NameEY756203
Unique NameEY756203
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10258 contig Csv1_Contig10258:781..1555. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756203 vs. ExPASy Swiss-Prot
Match: YCF39_PORPU (Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.679e-34
Identity = 67/149 (44.97%), Postives = 100/149 (67.11%), Query Frame = 3
Query:   12 WGTYPPTRIAYMDTQDIARLTFVPLRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQAD 458
            W T   T IAY+DTQD A+L    L       R L   G +AWT+ E+ITLCE+L+GQ   ++ +P+S+L+  R++T+  +WT +++DRLAF+EVLTS  +F  PM+E +++L +D  ++I+LEKY Q+YF  ILK LKD+  +  Q D
Sbjct:  166 WVTGESTPIAYIDTQDAAKLVIKSLGVPSTENRILPLVGNKAWTSAEIITLCEKLSGQKTQISQIPLSLLKALRKITKTLQWTWNISDRLAFAEVLTSGEIFMAPMNEVYEILSIDKSEVISLEKYFQEYFGKILKVLKDISYEQSQQD 314          
BLAST of EY756203 vs. ExPASy Swiss-Prot
Match: YCF39_PORYE (Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.135e-33
Identity = 66/149 (44.30%), Postives = 98/149 (65.77%), Query Frame = 3
Query:   12 WGTYPPTRIAYMDTQDIARLTFVPLRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQAD 458
            W T   T IAY+DTQD A+L    L       RTL   G  AWT+ E+I LCE+L+GQ   ++ +P+ +L+  R++T+  +WT +++DRLAF+E+L+S   F+ PM E + +LG+D  ++I+LEKYLQ+YF  ILK LKD+  +  Q D
Sbjct:  166 WVTGESTPIAYIDTQDAAKLVIKSLGVPSTENRTLPLVGNPAWTSAEIIKLCEKLSGQKTQISQIPIGLLKALRRITKTLQWTWNISDRLAFAEILSSGEQFTAPMDEVYSILGIDRLEVISLEKYLQEYFGKILKVLKDITYEQGQQD 314          
BLAST of EY756203 vs. ExPASy Swiss-Prot
Match: YCF39_CYAPA (Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.126e-30
Identity = 65/147 (44.22%), Postives = 92/147 (62.59%), Query Frame = 3
Query:   12 WGTYPPTRIAYMDTQDIARLTFVPLRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 452
            W T   T IAYMDT DIAR T   L  ++ N R     G R+W + ++I LCERL+GQ+A VT VP++ L   R  + FFEW  ++ADRLAF+EVL+    F+  M E + +  +++     LE YLQ+YF+ ILK+LK++ +Q  Q
Sbjct:  166 WITTESTSIAYMDTIDIARFTLRSLVLKETNNRVFPLVGTRSWNSADIIQLCERLSGQNAKVTRVPIAFLELARNTSCFFEWGWNIADRLAFTEVLSKSQFFNSSMDEVYKIFKIESTSTTILESYLQEYFSRILKRLKEINSQQSQ 312          
BLAST of EY756203 vs. ExPASy Swiss-Prot
Match: YCF39_GUITH (Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.731e-29
Identity = 63/150 (42.00%), Postives = 99/150 (66.00%), Query Frame = 3
Query:   12 WGTYPPTRIAYMDTQDIARLTFVPLRNEKING---RTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 452
            W T   T+I Y+DT DIA+     +R+  +NG   RT+   G ++W ++E+I LCERL+GQ AN+T +P+ +L F + LT FFEWT ++++RLAF+EVL +    +  M+ T+   G +  DI +LE Y+QDYF  IL++LK+L  + ++
Sbjct:  166 WITGEYTKINYIDTNDIAKFA---VRSLSLNGTIKRTIPLVGLKSWNSEEIIQLCERLSGQKANITKIPLQLLVFFKYLTGFFEWTTNISERLAFAEVLNARQDITSEMASTYSQFGFEPNDITSLESYMQDYFGRILRRLKELSDERER 312          
BLAST of EY756203 vs. ExPASy Swiss-Prot
Match: YCF39_ODOSI (Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.070e-25
Identity = 53/141 (37.59%), Postives = 83/141 (58.87%), Query Frame = 3
Query:   30 TRIAYMDTQDIARLTFVPLRNEKINGRTLTFSGPRAWTTQEVITLCERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 452
            T ++YMDTQDIA+     L+  +   RT    G + W + E+I LCE+LAGQ A V  +P+ +L+   Q+  FFEW  +++DRLAF+E+L  +  FS    + +    VD  +I  L+ Y  +YF  +LK+L+D+  +  Q
Sbjct:  172 TCVSYMDTQDIAKFCLRSLQLPETKNRTFVLGGQKGWVSSEIINLCEQLAGQSAKVNKIPLFLLKLVSQIFGFFEWGQNISDRLAFAEILNVENDFSKSTFDLYKTFKVDDSEITQLDDYFLEYFIRLLKRLRDINFEDIQ 312          
The following BLAST results are available for this feature:
BLAST of EY756203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YCF39_PORPU1.679e-3444.97Uncharacterized protein ycf39 OS=Porphyra purpurea... [more]
YCF39_PORYE4.135e-3344.30Uncharacterized protein ycf39 OS=Porphyra yezoensi... [more]
YCF39_CYAPA1.126e-3044.22Uncharacterized protein ycf39 OS=Cyanophora parado... [more]
YCF39_GUITH4.731e-2942.00Uncharacterized protein ycf39 OS=Guillardia theta ... [more]
YCF39_ODOSI7.070e-2537.59Uncharacterized protein ycf39 OS=Odontella sinensi... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-G12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756203 ID=EY756203; Name=EY756203; organism=Citrus sinensis; type=EST; length=775bp
CCACGCGTCCGTGGGGAACTTATCCACCAACTCGAATTGCATACATGGAC
ACTCAGGATATAGCGCGACTGACATTTGTACCTTTACGCAATGAGAAAAT
TAATGGACGGACTCTCACCTTTTCTGGTCCTCGGGCATGGACAACACAAG
AGGTTATAACATTGTGTGAGAGGCTCGCAGGTCAAGATGCAAATGTTACC
ATGGTCCCTGTGTCTGTCTTGAGATTTACTAGGCAGCTTACACGGTTTTT
TGAGTGGACAAATGATGTTGCTGATAGACTGGCATTTTCGGAGGTTCTTA
CAAGTGATACTGTATTCTCTGTTCCAATGTCTGAGACATTCGATCTTCTC
GGTGTGGACGCTAAGGATATCATTACGCTGGAGAAATATTTGCAGGATTA
CTTCACTAACATATTGAAGAAATTGAAGGACCTCAAAGCACAATCTAAGC
AAGCTGACTTTTACATCTAAGAGAAGACCATTTTCATTGTAAATGAAACT
TTGTATGCATCTGAAATCCTAAAACAACGCAGTAGCTTTCTGTTAAAGTG
ATACAGCAAAGGCTTTTGTTTAATTATGCAAGTACCAAAGGTATCGGCTT
CATCAAGGAGCATTAGTGGTAATTTTGCTCAGGTGCTTCATATCACAGTT
TTGTTATTGTAAGGGATTTTATGTAATTAAATGATGCAGATAAGACTCAA
TAATTAATTTGTCTCATGATCAAATTAGATAGTTCTATGTAAGATGGGAT
ACGTANTTCAAAAAAAAAAAAAAAA
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