EY756088

Overview
NameEY756088
Unique NameEY756088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY756088 vs. ExPASy Swiss-Prot
Match: NOL_ARATH (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.233e-13
Identity = 38/41 (92.68%), Postives = 38/41 (92.68%), Query Frame = 2 
Query:  512 RFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSVSFV 634
            RFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLS   V
Sbjct:  229 RFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSPGMV 269
[Close]
BLAST of EY756088 vs. ExPASy Swiss-Prot
Match: NOL_ORYSJ (Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.834e-11
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 2 
Query:  512 RFAAYGATKRSVVHLTKSLQAELQMQDVKNVVVHNLSVSFV 634
            RFAAYGATKRSVVHLTKSLQAELQM +V NV+VHNLS   V
Sbjct:  224 RFAAYGATKRSVVHLTKSLQAELQMNEVNNVMVHNLSPGMV 264
The following BLAST results are available for this feature:
BLAST of EY756088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NOL_ARATH6.233e-1392.68Chlorophyll(ide) b reductase NOL, chloroplastic OS... [more]
NOL_ORYSJ5.834e-1182.93Chlorophyll(ide) b reductase NOL, chloroplastic OS... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-D12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756088 ID=EY756088; Name=EY756088; organism=Citrus sinensis; type=EST; length=911bp
TTCGTCGACCCACGCGTCCGCAACTTTAATGGCAGACTAGGGATGGGTCA
ATGTCTTTCAATACCAACTTGTAGTGGATGAGGGACAAGATCTGTTGGAA
ATTGCACTTCCTTTTACCACCATATTCACTGCTATGCTGTCTCCATTGTC
GTTACCATCAGTACTTCGTAGCTTTACAATTTGACCAGCACCAGTTGGCC
AGTGCCATTGCCATAGTACTGCCTTGTTCTACTGAAAGATCTCTTTGTTG
AATCTTTGATGCTTAATGACTGATGTGTCACACTTGCTTAAGTTGAGTTA
CCGTAGTTTTCAGCTTTTTGAAATGTCAGCAAACATGATACTTGAAATCA
TTCTAATCTTTATCACATTCATGCTGTGTTGTGGAATGTTGTTTCCTTGA
CAATATACAATATTAATGGCCACTTATGCGACAAACTCTTACAGCCTTAC
CTCTGTATATAATCTGACAAATAGTCTTTTAGTTCTTTCTCCTTTTTTTA
TCTTTTTTCATAGATTTGCTGCATATGGGGCAACTAAACGTAGTGTAGTG
CATTTGACAAAGTCATTACAGGCAGAATTGCAGATGCAAGATGTTAAAAA
TGTTGTGGTGCATAATTTGTCGGTAAGCTTTGTTATGGTTAAGTAGTTAC
CCTATGTTTAAATTTTATATATCCAATCCTAATTTGAAGTATAGATCTAA
ATCGTATTGATAATGGGAAAATTGAATACTACTGCTAAAAGATCTATACA
AATGCTTACCCTTTTGATGTGAAAGTCATGTCTCTGAAACTGGTAACTTA
GCCTTCCAGTTTCAATCACCTGCTCATCTTAAATGTTCCTGCTCAAATTT
CGTTTGAAGCCATCCTGACCTTTCTTTAGCTGCAAGTTAAACTCACGACC
ATTATATTCAA
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